BAC Information

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BAC

Clone NameB6Ng01-127K11
Chromosome12 (Build37)
Map Location 63,710,257 - 63,711,159
singlet/doubletsinglet
Overlap geneLOC100040438
Upstream geneLrfn5, LOC665707, LOC100040403, LOC665713, LOC622746
Downstream gene1700047L15Rik, Tspyl-ps, EG665741, EG382606
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-127K11.bB6Ng01-127K11.g
ACCDH929712DH929713
length1,245903
definitionDH929712|Mus musculus domesticus DNA, BAC clone: B6Ng01-127K11, 5' end.DH929713|Mus musculus domesticus DNA, BAC clone: B6Ng01-127K11, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaaagctactgggatagacacaattttgtgatattctggtgaag
aatatggaagttttctgctatcctacaaaattgatcaaagatatgctgaa
aaacaatagattaaattttaggtaaggaaaattccaaaaaaaaaatctgt
tatttttaatctgtggtatggttgtcaatgataaccttgatgagtaagat
tcatatttaaaaataacaagatatccagagagaaatttggaactctatca
ttcatatgacatgaattacttgtcaggcaactttacacacacatgcacac
tcacacacacatgcacacacaagcatgcacacacgcacaccaatcttagg
aaataaacattatctaccagagttctggcctagagtggtcattgggaggc
agtggctcttggggtcagaaggtattacaaaagaatgggtatgggctaga
cagaaaagataaaagaggaaaagagtagagaaaatatgctaatgttgcca
gggaacatactagctggataggtcttatgtaaacctgctactcacattct
actaaaggaacaaagcaagaaaatgactcctgagaacatattatacccag
ataacagtgcatattcaaccctaaccagggaacattcttacattagatgg
taaatactacagagacctataaaagaacatagaagacttgagaaaaccca
gtcataaacggaataacttgtttaaacatcaccacaaggatcagggatct
acatggacaagtaggaaaatactttaggaatcagaggtaataggtggccc
acagaaaatatcatcttgagacagaactgatgcacatatgaacttttaaa
gaatataacaacatgtataagacctgcaaaaaagtgcctcagcattgaga
aggaaaatcagacaaaattccgacccttcaccaatacatgtacaattgat
acttgctgtgaaaggaaatcattttttcaatggacatccattgaggatgt
atatcaactctatgacaagaaaatgttttgtatacacacaaacaccaccc
acacacacatatgtgtgtgtggggtgtttcgtttacatatacatattata
attatgcaattcttttcccttgtttagattttggcattaacttttgaatg
gattcatttctattgtcagagagaaacatttgagaagctgcatggctgaa
attggccgaatcgggagtttaggcgaggcacaagcttaaactgca
gaattcacttcttctctggaattttgagtcatgatgtgcacttaaatatt
agttcactggtgtatttaagaaaatctattatttcttagttttaagaatt
ttcatttttctaattccaagtctagggctgatgactgaatggggtatttg
catggtagtattaaaatgtaaattatgtttgactattttttctttccata
tttgtatgcatgctgcattgtagtgttttgtttgaccactgagaagaatt
aataaaccattataaactatataaaaatagccattatctgcaaattaagg
actttaaattgatagttaaaagtttgtggatcaatatcattatgagagct
ctaaaaatatatcaaacccttcctacacaccaattggatctaattactag
ttttgaaatcagctcagccatcattatttttggtacctatccaagtaaca
ctagggcactaatgatgtttaaggaccactaccctacaaaattttaaaat
agcattcctaagtaaaatttgacttgcaactctgtcttttcctagtgagt
gaatggaaaaggggattcagcgtatctcattcaaggtttgaacttttttt
gcacattgtcaaaattatttgcaataagaagtaaatgttttgtcataata
tccaaagaaagcagttctactatcatcaggtttaaaagagattgtgctga
aactatcttcagttgattacttaactcatagctcatggtttgctggtttt
gcaacaaggagaaatataacagttgaaatattttctcaacacctaggacc
tctactaggactggtatgtttgggtctttctgtgtatttgtgtatgtggg
tatccatatgtgtgcatgtgtagtgaatgcatgcctgtacatatgaatgt
gtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_63710257_63711159
seq2: B6Ng01-127K11.g_68_970

seq1  GAATTCACTTCTTCTCTGGAATTTTGAGTCATGATGTGCACTTAAATATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTCTTCTCTGGAATTTTGAGTCATGATGTGCACTTAAATATT  50

seq1  AGTTCACTGGTGTATTTAAGAAAATCTATTATTTCTTAGTTTTAAGAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCACTGGTGTATTTAAGAAAATCTATTATTTCTTAGTTTTAAGAATT  100

seq1  TTCATTTTTCTAATTCCAAGTCTAGGGCTGATGACTGAATGGGGTATTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTTTTCTAATTCCAAGTCTAGGGCTGATGACTGAATGGGGTATTTG  150

seq1  CATGGTAGTATTAAAATGTAAATTATGTTTGACTATTTTTTCTTTCCATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGTAGTATTAAAATGTAAATTATGTTTGACTATTTTTTCTTTCCATA  200

seq1  TTTGTATGCATGCTGCATTGTAGTGTTTTGTTTGACCACTGAGAAGAATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTATGCATGCTGCATTGTAGTGTTTTGTTTGACCACTGAGAAGAATT  250

seq1  AATAAACCATTATAAACTATATAAAAATAGCCATTATCTGCAAATTAAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAACCATTATAAACTATATAAAAATAGCCATTATCTGCAAATTAAGG  300

seq1  ACTTTAAATTGATAGTTAAAAGTTTGTGGATCAATATCATTATGAGAGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTAAATTGATAGTTAAAAGTTTGTGGATCAATATCATTATGAGAGCT  350

seq1  CTAAAAATATATCAAACCCTTCCTACACACCAATTGGATCTAATTACTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAAATATATCAAACCCTTCCTACACACCAATTGGATCTAATTACTAG  400

seq1  TTTTGAAATCAGCTCAGCCATCATTATTTTTGGTACCTATCCAAGTAACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGAAATCAGCTCAGCCATCATTATTTTTGGTACCTATCCAAGTAACA  450

seq1  CTAGGGCACTAATGATGTTTAAGGACCACTACCCTACAAAATTTTAAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGGCACTAATGATGTTTAAGGACCACTACCCTACAAAATTTTAAAAT  500

seq1  AGCATTCCTAAGTAAAATTTGACTTGCAACTCTGTCTTTTCCTAGTGAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTCCTAAGTAAAATTTGACTTGCAACTCTGTCTTTTCCTAGTGAGT  550

seq1  GAATGGAAAAGGGGATTCAGCGTATCTCATTCAAGGTTTGAACTTTTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGGAAAAGGGGATTCAGCGTATCTCATTCAAGGTTTGAACTTTTTTT  600

seq1  GCACATTGTCAAAATTATTTGCAATAAGAAGTAAATGTTTTGTCATAATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATTGTCAAAATTATTTGCAATAAGAAGTAAATGTTTTGTCATAATA  650

seq1  TCCAAAGAAAGCAGTTCTACTATCATCAGGTTT-AAAGAGATTGTGCTGA  699
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TCCAAAGAAAGCAGTTCTACTATCATCAGGTTTAAAAGAGATTGTGCTGA  700

seq1  AACTATCTTCAGTTGATTACTTAACTCATAGCTCATGGTTTGCTGGTTTT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATCTTCAGTTGATTACTTAACTCATAGCTCATGGTTTGCTGGTTTT  750

seq1  GCAACAAGGAGAAATATAACAGTTGAAATATTTTCTCAACACCTAGGACC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACAAGGAGAAATATAACAGTTGAAATATTTTCTCAACACCTAGGACC  800

seq1  TCTACTAGGTACTGGTATGTTTGGGTCTTTCTGTGTATTTGTGTATGTGG  849
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TCTACTAGG-ACTGGTATGTTTGGGTCTTTCTGTGTATTTGTGTATGTGG  849

seq1  GTATTCATATGTGTGCATGTGTAGTGAATGCATGCCTGTACATATGAATG  899
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCCATATGTGTGCATGTGTAGTGAATGCATGCCTGTACATATGAATG  899

seq1  TGTG  903
      ||||
seq2  TGTG  903