BAC Information

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BAC

Clone NameB6Ng01-128A22
Chromosome12 (Build37)
Map Location 54,662,806 - 54,787,143
singlet/doubletdoublet
Overlap geneNpas3
Upstream geneArhgap5, Akap6
Downstream geneEgln3, EG665239, EG665251, LOC665256, LOC621363, 1110002B05Rik, Eapp
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-128A22.bB6Ng01-128A22.g
ACCDH930009DH930010
length9171,095
definitionDH930009|Mus musculus domesticus DNA, BAC clone: B6Ng01-128A22, 5' end.DH930010|Mus musculus domesticus DNA, BAC clone: B6Ng01-128A22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(54,662,806 - 54,663,716)(54,786,033 - 54,787,143)
sequence
gaattcttactttccataaaagtggatggtagaaagaaagatgccttcat
caatgtgttcaatgctccgaggactcaagaaaggtagcgagggccaagta
tttgtgtaagagaagtgagcacaacaaagccagttcctgcttgcacccag
ttgagaagaaagtaggcatataaatgcatgtcaaactaagtgctacaaag
aaaacttgggcatcgtgacagagtaattgagaacagcttagacagtgttc
caagtgtttttctcttgcaaagaaaacccagagacaaaatgctagccatt
tgggtggtgtgcaggtggggtgtggtggggtctccgttggtgttttaaag
tgcctcaattcccactgcacagagtcagaaagcaaaatggtggtgggtgc
tgggagaatgaagtcttcctaggcccagctctggaactgattacctagta
gctatatgcaattcactttgcctgcctagagcttcagtgatttgtcatca
ttaccagatacttaccaaatgcctattatataggattcacagagacagac
aaatgaatgggaaaaacctctgctttcttagaacttaccttctaccagag
aagaaggttgtcaagtgcagatgtgaagtgaatgacatgtttctacaaac
acataagctgctctaaaggaatggaagctacagtgggttttttccaggtg
catcaagtatttcagcatctcactgaggaagggcacaaagtcaaggagca
aatcagatgcattcctgggaggagaccctggggaggagaaccctgcagag
ctgccctgcaggagtgaggctgatggaacctaggaaaagtgaggatggtt
gtggctagacaggtagaaatgaagccagctgtagaaattgatgacatctt
aaccaggccaagacgga
gaattcacgtgctcaaatactttgtagatatggagaggtagcagccaagg
aaaaagacatggtggtgaggtaggaatgtggtatatgagcataaaaggct
tcccaaccggggttgcactttgcctgtgtttctcttaattcattcatcat
gccaactgacagatctgtgaattggtgttccttcgctataccttacagga
ccatgctgtgctttaatgttatacaataaaaaaattcaacctaaattaag
gaaaaattcaaaagaatgaaaaagccctgtacgttcacattccctaattc
cttttgtttttgatgacttagaatagaggaagagtggccattcagtgctc
agtttaagtgatgggtcgggcctgtttgtaatcgcagtttcttatgtaca
catccacgggcaggggatttgacttctccatctttatttgaaaacagaag
tgaagtattgcactggctcctagctaatgaaacaatgtttccatgaagaa
gacaggagaagaatgacctccaaaagaaaaagtttgacttttgctccttg
gttaatatgaaaagaaggagctaggaacttgccaagtacatttttagcag
caattattgggaagtggctggaatgtggaggctttagtctagaactccac
ctgggaagaaaggagttgttctccaaaatcccaaagaacttcgctttgct
cacgtcagtcacttagctgagggcagaaatcagattgtatagaaaggaca
cccggcattcaaaccatgccttttcagggagattgtacaaagaggcgact
tgaaaacaatcaagtttatacacacaaatcatcccactcgtggtctggtc
tatacacagaatcccctgctgcggcacagcctgctcacaccagtgccact
gggttgatggattttcctatagtcactccctaccttcagcttctgatgcc
cagcacgcacagagatgaggtgaaaggcctcactctggtcttgcattcaa
ggcggagatcattttctatctccaaacgaatagaatctagaatgctgagt
cacaccccctgttactctaggacagctgccagacagaagtcacac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_54662806_54663716
seq2: B6Ng01-128A22.b_51_967

seq1  GAATTCTTACTTTCCATAAAAGTGGATGGTAGAAAGAAAGATGCCTTCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTACTTTCCATAAAAGTGGATGGTAGAAAGAAAGATGCCTTCAT  50

seq1  CAATGTGTTCAATGCTCCGAGGACTCAAGAAAGGTAGCGAGGGCCAAGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGTGTTCAATGCTCCGAGGACTCAAGAAAGGTAGCGAGGGCCAAGTA  100

seq1  TTTGTGTAAGAGAAGTGAGCACAACAAAGCCAGTTCCTGCTTGCACCCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGTAAGAGAAGTGAGCACAACAAAGCCAGTTCCTGCTTGCACCCAG  150

seq1  TTGAGAAGAAAGTAGGCATATAAATGCATGTCAAACTAAGTGCTACAAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGAAGAAAGTAGGCATATAAATGCATGTCAAACTAAGTGCTACAAAG  200

seq1  AAAACTTGGGCATCGTGACAGAGTAATTGAGAACAGCTTAGACAGTGTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTTGGGCATCGTGACAGAGTAATTGAGAACAGCTTAGACAGTGTTC  250

seq1  CAAGTGTTTTTCTCTTGCAAAGAAAACCCAGAGACAAAATGCTAGCCATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGTTTTTCTCTTGCAAAGAAAACCCAGAGACAAAATGCTAGCCATT  300

seq1  TGGGTGGTGTGCAGGTGGGGTGTGGTGGGGTCTCCGTTGGTGTTTTAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTGGTGTGCAGGTGGGGTGTGGTGGGGTCTCCGTTGGTGTTTTAAAG  350

seq1  TGCCTCAATTCCCACTGCACAGAGTCAGAAAGCAAAATGGTGGTGGGTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCAATTCCCACTGCACAGAGTCAGAAAGCAAAATGGTGGTGGGTGC  400

seq1  TGGGAGAATGAAGTCTTCCTAGGCCCAGCTCTGGAACTGATTACCTAGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGAATGAAGTCTTCCTAGGCCCAGCTCTGGAACTGATTACCTAGTA  450

seq1  GCTATATGCAATTCACTTTGCCTGCCTAGAGCTTCAGTGATTTGTCATCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATATGCAATTCACTTTGCCTGCCTAGAGCTTCAGTGATTTGTCATCA  500

seq1  TTACCAGATACTTACCAAATGCCTATTATATAGGATTCACAGAGACAGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCAGATACTTACCAAATGCCTATTATATAGGATTCACAGAGACAGAC  550

seq1  AAATGAATGGGAAAAACCTCTGCTTTCTTAGAACTTACCTTCTACCAGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAATGGGAAAAACCTCTGCTTTCTTAGAACTTACCTTCTACCAGAG  600

seq1  AAGAAGGTTGTCAAGTGCAGATGTGAAGTGAATGACATG-TTCTACAAAC  649
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  AAGAAGGTTGTCAAGTGCAGATGTGAAGTGAATGACATGTTTCTACAAAC  650

seq1  ACATAAGCTGCTCTAAAGGAATGGAAGCTACAGTGGGTTTTTTCCAGGTG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAGCTGCTCTAAAGGAATGGAAGCTACAGTGGGTTTTTTCCAGGTG  700

seq1  CATCAAGTATTTCAGCATCTCACTGAGGAAGGGCACAAAGTCAAGGAGCA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAAGTATTTCAGCATCTCACTGAGGAAGGGCACAAAGTCAAGGAGCA  750

seq1  AATCAGATGCATTCCTGGGAGGAGACCCT-GGGAGGAGAACCCTGCAGAG  798
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  AATCAGATGCATTCCTGGGAGGAGACCCTGGGGAGGAGAACCCTGCAGAG  800

seq1  CTG-CCTGCAGGAGTGAGGCTGATGGAACCTAGG-AAAGTGAGGATGGGT  846
      ||| |||||||||||||||||||||||||||||| ||||||||||||| |
seq2  CTGCCCTGCAGGAGTGAGGCTGATGGAACCTAGGAAAAGTGAGGATGGTT  850

seq1  GTGGCTAGACAGGGAG-AAGGAAG-CAGCTGTAGAGATTGATGACATCAT  894
      ||||||||||||| || || |||| |||||||||| |||||||||||| |
seq2  GTGGCTAGACAGGTAGAAATGAAGCCAGCTGTAGAAATTGATGACATCTT  900

seq1  AACCAGGCCAAGACAGA  911
      |||||||||||||| ||
seq2  AACCAGGCCAAGACGGA  917

seq1: chr12_54786033_54787143
seq2: B6Ng01-128A22.g_71_1165 (reverse)

seq1  GTGTGACTCCTGTCCTGGCAGCTGTGCCTCAGAGTAACCAGGGGGTGTTT  50
      |||||||| |||| ||||||||||| ||| ||||||| ||||||||||  
seq2  GTGTGACTTCTGT-CTGGCAGCTGT-CCT-AGAGTAA-CAGGGGGTGT--  44

seq1  GGGAACTCCAGCATCCTTAGA-TCTA-TCGTTTGGAGATAGATATTGATT  98
          ||| |||||| | |||| |||| ||||||||||||||| | ||| |
seq2  ---GACT-CAGCATTC-TAGATTCTATTCGTTTGGAGATAGAAAATGA-T  88

seq1  CTCCCGCCTTTGAATGCAAAGGCCCAGAGTGAGGCCTTTCACCCTCATCT  148
      || ||||| ||||||||||  | |||||||||||||||||| ||||||||
seq2  CT-CCGCC-TTGAATGCAA--GACCAGAGTGAGGCCTTTCA-CCTCATCT  133

seq1  CTGTGCGTGCTGGGCATCAGAAGCTGAAGGTAGGGAGGTGACTATAGGAA  198
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CTGTGCGTGCTGGGCATCAGAAGCTGAAGGTAGGGA-GTGACTATAGGAA  182

seq1  AATCCATCAACCCAGTGGCACTGGTGTGAGCAGGCTGTGCCGCAGCAGGG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCATCAACCCAGTGGCACTGGTGTGAGCAGGCTGTGCCGCAGCAGGG  232

seq1  GATTCTGTGTATAGACCAGACCACGAGTGGGATGATTTGTGTGTATAAAC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCTGTGTATAGACCAGACCACGAGTGGGATGATTTGTGTGTATAAAC  282

seq1  TTGATTGTTTTCAAGTCGCCTCTTTGTACAATCTCCCTGAAAAGGCATGG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTGTTTTCAAGTCGCCTCTTTGTACAATCTCCCTGAAAAGGCATGG  332

seq1  TTTGAATGCCGGGTGTCCTTTCTATACAATCTGATTTCTGCCCTCAGCTA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAATGCCGGGTGTCCTTTCTATACAATCTGATTTCTGCCCTCAGCTA  382

seq1  AGTGACTGACGTGAGCAAAGCGAAGTTCTTTGGGATTTTGGAGAACAACT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGACTGACGTGAGCAAAGCGAAGTTCTTTGGGATTTTGGAGAACAACT  432

seq1  CCTTTCTTCCCAGGTGGAGTTCTAGACTAAAGCCTCCACATTCCAGCCAC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCTTCCCAGGTGGAGTTCTAGACTAAAGCCTCCACATTCCAGCCAC  482

seq1  TTCCCAATAATTGCTGCTAAAAATGTACTTGGCAAGTTCCTAGCTCCTTC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCAATAATTGCTGCTAAAAATGTACTTGGCAAGTTCCTAGCTCCTTC  532

seq1  TTTTCATATTAACCAAGGAGCAAAAGTCAAACTTTTTCTTTTGGAGGTCA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCATATTAACCAAGGAGCAAAAGTCAAACTTTTTCTTTTGGAGGTCA  582

seq1  TTCTTCTCCTGTCTTCTTCATGGAAACATTGTTTCATTAGCTAGGAGCCA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCTCCTGTCTTCTTCATGGAAACATTGTTTCATTAGCTAGGAGCCA  632

seq1  GTGCAATACTTCACTTCTGTTTTCAAATAAAGATGGAGAAGTCAAATCCC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAATACTTCACTTCTGTTTTCAAATAAAGATGGAGAAGTCAAATCCC  682

seq1  CTGCCCGTGGATGTGTACATAAGAAACTGCGATTACAAACAGGCCCGACC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCCGTGGATGTGTACATAAGAAACTGCGATTACAAACAGGCCCGACC  732

seq1  CATCACTTAAACTGAGCACTGAATGGCCACTCTTCCTCTATTCTAAGTCA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCACTTAAACTGAGCACTGAATGGCCACTCTTCCTCTATTCTAAGTCA  782

seq1  TCAAAAACAAAAGGAATTAGGGAATGTGAACGTACAGGGCTTTTTCATTC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAACAAAAGGAATTAGGGAATGTGAACGTACAGGGCTTTTTCATTC  832

seq1  TTTTGAATTTTTCCTTAATTTAGGTTGAATTTTTTTATTGTATAACATTA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGAATTTTTCCTTAATTTAGGTTGAATTTTTTTATTGTATAACATTA  882

seq1  AAGCACAGCATGGTCCTGTAAGGTATAGCGAAGGAACACCAATTCACAGA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCACAGCATGGTCCTGTAAGGTATAGCGAAGGAACACCAATTCACAGA  932

seq1  TCTGTCAGTTGGCATGATGAATGAATTAAGAGAAACACAGGCAAAGTGCA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCAGTTGGCATGATGAATGAATTAAGAGAAACACAGGCAAAGTGCA  982

seq1  ACCCCGGTTGGGAAGCCTTTTATGCTCATATACCACATTCCTACCTCACC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCGGTTGGGAAGCCTTTTATGCTCATATACCACATTCCTACCTCACC  1032

seq1  ACCATGTCTTTTTCCTTGGCTGCTACCTCTCCATATCTACAAAGTATTTG  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGTCTTTTTCCTTGGCTGCTACCTCTCCATATCTACAAAGTATTTG  1082

seq1  AGCACGTGAATTC  1111
      |||||||||||||
seq2  AGCACGTGAATTC  1095