BAC Information

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BAC

Clone NameB6Ng01-128B20
Chromosome12 (Build37)
Map Location 102,113,877 - 102,285,346
singlet/doubletdoublet
Overlap geneGpr68, 0610010D24Rik, LOC100040184, Smek1
Upstream gene2610021K21Rik, Tdp1, LOC100040041, Kcnk13, Psmc1, BC002230, Calm1, Ttc7b, Rps6ka5, LOC100040123, 9030617O03Rik, EG667148
Downstream gene4930463M05Rik, Mylf-ps, 4932415G16Rik, Mtac2d1, Fbln5, Trip11, Atxn3, LOC100040305, LOC100040297, Cpsf2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-128B20.bB6Ng01-128B20.g
ACCDH930053DH930054
length609765
definitionDH930053|Mus musculus domesticus DNA, BAC clone: B6Ng01-128B20, 5' end.DH930054|Mus musculus domesticus DNA, BAC clone: B6Ng01-128B20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(102,113,877 - 102,114,485)(102,284,584 - 102,285,346)
sequence
gaattccaggaatggagactccatccctagatgcataaagcagttggttc
agcttctggctttctctagaacacaagctggtgggaagcagcagatggag
atgtgctctgtgctgaggctctctcctactctcttcgggccaacccacag
tcctgtgtaaacaggaagatgagtccttgtattactaagcaacactgggg
agtaaaaaaggaattttaatggcttctgtcaccttcagtccaaaccagat
ggacgtttgctcccagtccttctcttaggagagaaagcaggattaatcct
taataatattcttgcttagtctgtttggaagaaagagctattcttccata
acactccaaaactccaggagcctgatccatagagggattaagtggtcaaa
atcaaatttatgcttcaataggatgtgggcgatccttagtgataaacacg
gagtctgatgctggtgagaggatgccccggcagacagaggttgtcaacaa
gcaaggtgggcggctgcaagcaaaaccagttggttctggggaaatgccag
agatgagtgaaacaggctcttcttctggtctgatgggggctcacccttgc
ggggggggg
gaattctataagttagatatgcattgtaagtagaaaagacaatgatacat
gcagtatcttatttactgtgcctttttaaaggtttttggggacttttgtg
ttggtgtttagggttagaaaatattgaactcgggctggagaagtgggttg
gtggataaaggcagcttgctgctgagtttagtcccttgaacctacatggt
gggagaggtccaactccttaaagctgtcttctgtcctccatatgtgagcc
acgcatgctaaatggagaacaaaaacagaactctgtaaaaagaatagatt
tcatttaaagctttattgtgaagccagaggcagctcggtggtagagtgct
ttacctggcatactagcatcatgagcccctgactcaatcctgagcatcaa
tgggatgggttggaggagggagcagagcttctattattagttctatgtgt
ggcaatgaaatcttgtgtcaatgtagtacaaaaaatgtgatcagaactga
acacaaagattcctccccttaatgaagatttgccgtgttgtgagcagaaa
cagtgcactttacattaaaaatgccaattgggcataactaggagttttct
catctgctttgaatggctggacttttatagaattgactggtaaccttttg
gaaaacaacttgtttattcagtatcaaagactaatagtattggatatttt
tgatgtggggctattgggtgtgagttaaacaagttattgatgtaaatcaa
gacaaatggaaataa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_102113877_102114485
seq2: B6Ng01-128B20.b_47_655

seq1  GAATTCCAGGAATGGAGACTCCATCCCTAGATGCATAAAGCAGTTGGTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGAATGGAGACTCCATCCCTAGATGCATAAAGCAGTTGGTTC  50

seq1  AGCTTCTGGCTTTCTCTAGAACACAAGCTGGTGGGAAGCAGCAGATGGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTCTGGCTTTCTCTAGAACACAAGCTGGTGGGAAGCAGCAGATGGAG  100

seq1  ATGTGCTCTGTGCTGAGGCTCTCTCCTACTCTCTTCGGGCCAACCCACAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGCTCTGTGCTGAGGCTCTCTCCTACTCTCTTCGGGCCAACCCACAG  150

seq1  TCCTGTGTAAACAGGAAGATGAGTCCTTGTATTACTAAGCAACACTGGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTGTAAACAGGAAGATGAGTCCTTGTATTACTAAGCAACACTGGGG  200

seq1  AGTAAAAAAGGAATTTTAATGGCTTCTGTCACCTTCAGTCCAAACCAGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAAAAAGGAATTTTAATGGCTTCTGTCACCTTCAGTCCAAACCAGAT  250

seq1  GGACGTTTGCTCCCAGTCCTTCTCTTAGGAGAGAAAGCAGGATTAATCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACGTTTGCTCCCAGTCCTTCTCTTAGGAGAGAAAGCAGGATTAATCCT  300

seq1  TAATAATATTCTTGCTTAGTCTGTTTGGAAGAAAGAGCTATTCTTCCATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAATATTCTTGCTTAGTCTGTTTGGAAGAAAGAGCTATTCTTCCATA  350

seq1  ACACTCCAAAACTCCAGGAGCCTGATCCATAGAGGGATTAAGTGGTCAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTCCAAAACTCCAGGAGCCTGATCCATAGAGGGATTAAGTGGTCAAA  400

seq1  ATCAAATTTATGCTTCAATAGGATGTGGGCGATCCTTAGTGATAAACACG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAATTTATGCTTCAATAGGATGTGGGCGATCCTTAGTGATAAACACG  450

seq1  GAGTCTGATGCTGGTGAGAGGATGCCCCGGCAGACAGAGGTTGTCAACAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCTGATGCTGGTGAGAGGATGCCCCGGCAGACAGAGGTTGTCAACAA  500

seq1  GCAAGGTGGGCGGCTGCAAGCAAAACCAGTTGGTTCTGGGGAAATGCCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGGTGGGCGGCTGCAAGCAAAACCAGTTGGTTCTGGGGAAATGCCAG  550

seq1  AGATGAGTGAAACAGGCTCTTCTTCTGGTCTGATGGGGGCTCACCCTTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGAGTGAAACAGGCTCTTCTTCTGGTCTGATGGGGGCTCACCCTTGC  600

seq1  GGGGGGGGG  609
      |||||||||
seq2  GGGGGGGGG  609

seq1: chr12_102284584_102285346
seq2: B6Ng01-128B20.g_69_833 (reverse)

seq1  TTATTTCCATTTGTCCTGATTTACATCAATAACTTGTTTAAACTCACACC  50
      ||||||||||||||| ||||||||||||||||||||||| ||||||||||
seq2  TTATTTCCATTTGTCTTGATTTACATCAATAACTTGTTT-AACTCACACC  49

seq1  CAATAGCCCCACATCAAAAATATCCAATACTATTAGTCTTTGATACTGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAGCCCCACATCAAAAATATCCAATACTATTAGTCTTTGATACTGAA  99

seq1  T-AACAAGTTGTTTTCC-AAAGGTTACCAGTCAATTCTAT-AAAGTCCAG  147
      | ||||||||||||||| |||||||||||||||||||||| |||||||||
seq2  TAAACAAGTTGTTTTCCAAAAGGTTACCAGTCAATTCTATAAAAGTCCAG  149

seq1  CCATTCAAAGCAGATGAGAAAACTCCTAGTTATGCCCAATTGGCATTTTT  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTCAAAGCAGATGAGAAAACTCCTAGTTATGCCCAATTGGCATTTTT  199

seq1  AATGTAAAGTGCACTGTTTCTGCTCACAACACGGCAAATCTTCATTAAGG  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTAAAGTGCACTGTTTCTGCTCACAACACGGCAAATCTTCATTAAGG  249

seq1  GGAGGAATCTTTGTGTTCAGTTCTGATCACATTTTTTGTACTACATTGAC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGAATCTTTGTGTTCAGTTCTGATCACATTTTTTGTACTACATTGAC  299

seq1  ACAAGATTTCATTGCCACACATAGAACTAATAATAGAAGCTCTGCTCCCT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGATTTCATTGCCACACATAGAACTAATAATAGAAGCTCTGCTCCCT  349

seq1  CCTCCAACCCATCCCATTGATGCTCAGGATTGAGTCAGGGGCTCATGATG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCAACCCATCCCATTGATGCTCAGGATTGAGTCAGGGGCTCATGATG  399

seq1  CTAGTATGCCAGGTAAAGCACTCTACCACCGAGCTGCCTCTGGCTTCACA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTATGCCAGGTAAAGCACTCTACCACCGAGCTGCCTCTGGCTTCACA  449

seq1  ATAAAGCTTTAAATGAAATCTATTCTTTTTACAGAGTTCTGTTTTTGTTC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGCTTTAAATGAAATCTATTCTTTTTACAGAGTTCTGTTTTTGTTC  499

seq1  TCCATTTAGCATGCGTGGCTCACATATGGAGGACAGAAGACAGCTTTAAG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTTAGCATGCGTGGCTCACATATGGAGGACAGAAGACAGCTTTAAG  549

seq1  GAGTTGGACCTCTCCCACCATGTAGGTTCAAGGGACTAAACTCAGCAGCA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTGGACCTCTCCCACCATGTAGGTTCAAGGGACTAAACTCAGCAGCA  599

seq1  AGCTGCCTTTATCCACCAACCCACTTCTCCAGCCCGAGTTCAATATTTTC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGCCTTTATCCACCAACCCACTTCTCCAGCCCGAGTTCAATATTTTC  649

seq1  TAACCCTAAACACCAACACAAAAGTCCCCAAAAACCTTTAAAAAGGCACA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCCTAAACACCAACACAAAAGTCCCCAAAAACCTTTAAAAAGGCACA  699

seq1  GTAAATAAGATACTGCATGTATCATTGTCTTTTCTACTTACAATGCATAT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAATAAGATACTGCATGTATCATTGTCTTTTCTACTTACAATGCATAT  749

seq1  CTAACTTATAGAATTC  763
      ||||||||||||||||
seq2  CTAACTTATAGAATTC  765