BAC Information

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BAC

Clone NameB6Ng01-128E13
Chromosome12 (Build37)
Map Location 16,027,048 - 16,211,940
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100042426, LOC217409, Trib2, LOC100043268, EG432636, LOC100043273
Downstream geneLpin1, Ntsr2, Greb1, E2f6, Rock2, Pqlc3, 2410004P03Rik, EG668514, Kcnf1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-128E13.bB6Ng01-128E13.g
ACCDH930175DH930176
length468408
definitionDH930175|Mus musculus domesticus DNA, BAC clone: B6Ng01-128E13, 5' end.DH930176|Mus musculus domesticus DNA, BAC clone: B6Ng01-128E13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(16,027,048 - 16,027,518)(16,211,528 - 16,211,940)
sequence
catatatactgtgctcctgtggaacgggaatgctacaactaattttcctc
aactgcattttctattaacctctgtctccacatgacctcatcttcactct
agtcacctctattccagaaggcaaggccttctcagtagcaacttcatgct
tttaggatggctatcacatgcaaaagccacatgctcacttgtacaccctg
caaaggccaaggtcctataacaatcactggaaccttcaaaaggcctcgag
ggtcactctgaccagaacactggggtcagtacctgctctagctttttttt
tgtgactataccaggcatttaacctatggcctcacatatgctagcaggca
ttctagcgggagttgcatcttttttttttagttctgagctgtttgctgtt
ttttttagttctaacctatccccccccgtcattgcccattcactaggcaa
atgtgtgtggagcctttt
attatttgtctgctgctgtgataaagcaccattaccaaaagcagcttggg
aaagaaagaatgtattgtgagtcatgcttctagagggatacgagtacact
atggtggggagacatgacagcagacagtaggcatttgctccagtggaaat
ctgagcatccatctcttcaattgtgaacacaagcagagagagtgagctag
aaggagagtgaaactatgtactctcaaagcccaatcccactggcacactt
ccttcccgaagtctgtatcacctctccaaagagcacaacaaactggtgag
caagtgttcaagtgcctgagtctatgggtggcattcacatgtaaaccacc
acagtggcatctgcataaaaatcctaaggaggcaatgctgtatttttcac
atctatta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_16027048_16027518
seq2: B6Ng01-128E13.b_49_521

seq1  GAATTCCATATATACTGTGCTCCTGTGTATCGAGAATGCTACAACTAATT  50
      ||||||||||||||||||||||||||| | || |||||||||||||||||
seq2  GAATTCCATATATACTGTGCTCCTGTGGAACGGGAATGCTACAACTAATT  50

seq1  TTCCTCAACTGCATTTTCTATTATCCTCTGTCTCCACATGACCTCATCTT  100
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TTCCTCAACTGCATTTTCTATTAACCTCTGTCTCCACATGACCTCATCTT  100

seq1  CACTCTAGTCACCTCTATTCCAGAAGGCAAGGCCTTCTCAGTAGCAATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CACTCTAGTCACCTCTATTCCAGAAGGCAAGGCCTTCTCAGTAGCAACTT  150

seq1  CATGCTTTTAGGATGGCTATCACATGCAAAAGCCACATGCTCACTTGTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTTTTAGGATGGCTATCACATGCAAAAGCCACATGCTCACTTGTAC  200

seq1  ACCCTGCAAAGGCCAAGGTCCTATAACAATCACTGGAACCTTCAAAAGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTGCAAAGGCCAAGGTCCTATAACAATCACTGGAACCTTCAAAAGGC  250

seq1  CTCGAGGGTCACTCTGACCAGAACACTGGGGTCAGTACCTGCTCTAGCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGAGGGTCACTCTGACCAGAACACTGGGGTCAGTACCTGCTCTAGCTT  300

seq1  TTGTTTTGTGACTATACCAGGCATTTAACCTATGGCCTCACATATGCTAG  350
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTGTGACTATACCAGGCATTTAACCTATGGCCTCACATATGCTAG  350

seq1  CAGGCATTCTAGCGGGAGTTGCATC-CCCTGTTCAAGTTCTGAGCTGTTT  399
      |||||||||||||||||||||||||    | ||  |||||||||||||||
seq2  CAGGCATTCTAGCGGGAGTTGCATCTTTTTTTTTTAGTTCTGAGCTGTTT  400

seq1  GCTGTTATTCTTAATTCTACCCTAT-ATTCTCTGTCATTGCCCATTCACT  448
      |||||| || ||| ||||| |||||    | | |||||||||||||||||
seq2  GCTGTTTTTTTTAGTTCTAACCTATCCCCCCCCGTCATTGCCCATTCACT  450

seq1  TGGCAAATGTGTGTGGAGCCTTT  471
       ||||||||||||||||||||||
seq2  AGGCAAATGTGTGTGGAGCCTTT  473

seq1: chr12_16211528_16211940
seq2: B6Ng01-128E13.g_70_482 (reverse)

seq1  AATAGATGTGAAAAATACAGCATTGCCTCCTTAGGATTTTTATGCAGATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGATGTGAAAAATACAGCATTGCCTCCTTAGGATTTTTATGCAGATG  50

seq1  CCACTGTGGTGGTTTACATGTGAATGCCACCCATAGACTCAGGCACTTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGTGGTGGTTTACATGTGAATGCCACCCATAGACTCAGGCACTTGA  100

seq1  ACACTTGCTCACCAGTTTGTTGTGCTCTTTGGAGAGGTGATACAGACTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTTGCTCACCAGTTTGTTGTGCTCTTTGGAGAGGTGATACAGACTTC  150

seq1  GGGAAGGAAGTGTGCCAGTGGGATTGGGCTTTGAGAGTACATAGTTTCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGGAAGTGTGCCAGTGGGATTGGGCTTTGAGAGTACATAGTTTCAC  200

seq1  TCTCCTTCTAGCTCACTCTCTCTGCTTGTGTTCACAATTGAAGAGATGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTTCTAGCTCACTCTCTCTGCTTGTGTTCACAATTGAAGAGATGGA  250

seq1  TGCTCAGATTTCCACTGGAGCAAATGCCTACTGTCTGCTGTCATGTCTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCAGATTTCCACTGGAGCAAATGCCTACTGTCTGCTGTCATGTCTCC  300

seq1  CCACCATAGTGTACTCGTATCCCTCTAGAAGCATGACTCACAATACATTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCATAGTGTACTCGTATCCCTCTAGAAGCATGACTCACAATACATTC  350

seq1  TTTCTTTCCCAAGCTGCTTTTGGTAATGGTGCTTTATCACAGCAGCAGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTCCCAAGCTGCTTTTGGTAATGGTGCTTTATCACAGCAGCAGAC  400

seq1  AAATAATGAATTC  413
      |||||||||||||
seq2  AAATAATGAATTC  413