BAC Information

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BAC

Clone NameB6Ng01-129H10
Chromosome12 (Build37)
Map Location 58,926,886 - 58,928,071
singlet/doubletsinglet
Overlap genenone
Upstream geneSlc25a21, AU021838, LOC100040044, Foxa1, 4921506M07Rik, EG217600, BC042761
Downstream geneSstr1, Clec14a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-129H10.bB6Ng01-129H10.g
ACCDH931040DH931041
length1,149836
definitionDH931040|Mus musculus domesticus DNA, BAC clone: B6Ng01-129H10, 5' end.DH931041|Mus musculus domesticus DNA, BAC clone: B6Ng01-129H10, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgagcacagataactccccactgctctaagttgtttgtatcacg
gtattttatcacagcgataagaaatgaaattaagacagccttcaagcatc
ctctgtcccttgttaattttatcatcaatgcatagataaagggaaacatt
tcctgactcgaatacagacagagtatattatatttttattatacacacaa
gcatagctaaaaagcaagatgccttaaatagagctgtggaggcattgatg
agctgtttactttatcatgtcatcaattatcacagccagaaagtcaattg
tactgatcggctccccacactactgtgtaggatacatcccatctcacatt
gatatactgccatttatcattacctctagttatcatcgtatggccaattt
ccagtatctagtaactggacattcttcaaaagaaaactagtatgaaatcc
tcctttgtccgtttttatgcaattcatgtgttttctttattatgatcact
actgcttaggtttttggctatgatatcacaattctttcacaacaaaacag
gcataaatacataagctaatgttcatgaaacactgtggtggcaacaccat
acagtggcagacagaggcagaggacaggattatgcttctatctgagaaga
tcaaggacgatttcctggaggactgaggtctgagcttgtctatggcagca
agtagcttttgtcaaggtgaagccagagcttcaggaaggaagaaaattcc
caatagactgaaaacacagaggacaaaacaggtgactgtccatacataac
aagtagcagagctgaacaaagtgtggagtagtaaagacatatgggaatgc
agttagagaatgtaagtcagaaataagtcaagaaaacagcaactaaaggg
ttgaggttttcttttataacgtctcctgaaataaaataaacttagaatat
tgcttcctttaaattacagctagactctctatatctgtatgcatccctac
gtacaggacatactttcagtttttcagactgatgtttatctacactatca
acgggtgcttcaaaaataatcatgattcttgttattgagtgcattttatg
tcatacagcgacctatgctatattgttgcagccaactctgtaacctggg

gaattctctgtctagctttgtaccccatattttaattaggttatttgggg
ttttggagattaacttcttgagttctgtatatattttggatattagccct
ctgtcagatgtagggttagtgaagattttcttcaagatttcctgtaggtt
gccaatttgttctgctgatggtgtcttttgccttatagaagcttttcagt
ttcatgaggtcccatttatcaattcttgatcttagagcctgagtcattgg
tgttctgttcaggaaatactcccccccccccgcctgtgccaatgagttcg
aggctctttcctactttctcttctattaggttcagtgtatcttatttaag
gttcaggtccttgatccacttgaacttgagctttgtgcaaggtgataaat
acacatctatttttattctcctacaaacagactgccaattagaccagcat
catttattgaagatgatttcttttttccactttatgtttttggcttcttt
gtcaaagatcaagtgtccataggtgtatgagtttacttctgggtctttga
ttctattccatcgatgaacctgtctgtctctgtgccaataccatgttgct
ttttttttttttaaatcactattgctttgtagtacaatttgagatcagag
atggtgattccctcagacgttcttttattgttgagaattgttttggctat
ccttgtattttttgttgttccatatgaagttgagaattgctattttcatg
tatttgaagaattgtgttggaattttggtgggcattgtattgagcagcct
catagaggcagtggagagggaggagggagtgggatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_58926886_58928071
seq2: B6Ng01-129H10.b_48_1196 (reverse)

seq1  CCCAAGTTACAGAGTTGGCTGCAAAACAATATATTACCATTAGGTGTCGC  50
      |||| |||||||||||||||||  |||||||||  |    |||  |||||
seq2  CCCAGGTTACAGAGTTGGCTGC--AACAATATAGCA----TAG--GTCGC  42

seq1  TGTATGACATAAAATGCACTCAAATAACAAGGAAATCATTTGGATGTATT  100
      ||||||||||||||||||||| |||||||||  ||||||   ||| ||||
seq2  TGTATGACATAAAATGCACTC-AATAACAAG--AATCAT---GAT-TATT  85

seq1  TTTGAAAAGCACCCGTTTGATAGTGTAAGATAAAAACATCAAGTCTGAAA  150
      ||||  ||||||||| |||||||||| ||||  ||||||| |||||||||
seq2  TTTG--AAGCACCCG-TTGATAGTGT-AGAT--AAACATC-AGTCTGAAA  128

seq1  AAACTTGAAAGTATTGGTTCCTGTACGTAAGGGATGCATACAGAATAATT  200
      ||   |||||||||    |||||||||| |||||||||||||| |||  |
seq2  AA--CTGAAAGTAT---GTCCTGTACGT-AGGGATGCATACAG-ATA--T  169

seq1  AGAGAAGTCTTAAGCTGTAATTTAAAGGAAGCAATATTTCTAAGTTTATT  250
      |||| |||||  |||||||||||||||||||||||| |||||||||||||
seq2  AGAG-AGTCT--AGCTGTAATTTAAAGGAAGCAATA-TTCTAAGTTTATT  215

seq1  TTATTTTCAGGAGACGTTATAAAAGAAAACCTCAACCCTTTAGTTGCTGT  300
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTA-TTTCAGGAGACGTTATAAAAGAAAACCTCAACCCTTTAGTTGCTGT  264

seq1  TTTCTTGACTTATTTCTGACTTACATTCTCTAACTGCATTCCCATATGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTGACTTATTTCTGACTTACATTCTCTAACTGCATTCCCATATGTC  314

seq1  TTTACTACTCCACACTTTGTTCAGCTCCTGCTACTTGTTATGTATGGACA  400
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TTTACTACTCCACACTTTGTTCAGCT-CTGCTACTTGTTATGTATGGACA  363

seq1  GTCACCTGTTTTGTCCTCTGTGTTTTCAGTCTATTGGGAATTTTCTTCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACCTGTTTTGTCCTCTGTGTTTTCAGTCTATTGGGAATTTTCTTCCT  413

seq1  TCCTGAAGCTCTGGCTTCACCTTGACAAAAGCTACTTGCTGCCATAGACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGAAGCTCTGGCTTCACCTTGACAAAAGCTACTTGCTGCCATAGACA  463

seq1  AGCTCAGACCTCAGTCCTCCAGGAAATCGTCCTTGATCTTCTCAGATAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCAGACCTCAGTCCTCCAGGAAATCGTCCTTGATCTTCTCAGATAGA  513

seq1  AGCATAATCCTGTCCTCTGCCTCTGTCTGCCACTGTATGGTGTTGCCACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATAATCCTGTCCTCTGCCTCTGTCTGCCACTGTATGGTGTTGCCACC  563

seq1  ACAGTGTTTCATGAACATTAGCTTATGTATTTATGCCTGTTTTGTTGTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGTTTCATGAACATTAGCTTATGTATTTATGCCTGTTTTGTTGTGA  613

seq1  AAGAATTGTGATATCATAGCCAAAAACCTAAGCAGTAGTGATCATAATAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATTGTGATATCATAGCCAAAAACCTAAGCAGTAGTGATCATAATAA  663

seq1  AGAAAACACATGAATTGCATAAAAACGGACAAAGGAGGATTTCATACTAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAACACATGAATTGCATAAAAACGGACAAAGGAGGATTTCATACTAG  713

seq1  TTTTCTTTTGAAGAATGTCCAGTTACTAGATACTGGAAATTGGCCATACG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTTGAAGAATGTCCAGTTACTAGATACTGGAAATTGGCCATACG  763

seq1  ATGATAACTAGAGGTAATGATAAATGGCAGTATATCAATGTGAGATGGGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATAACTAGAGGTAATGATAAATGGCAGTATATCAATGTGAGATGGGA  813

seq1  TGTATCCTACACAGTAGTGTGGGGAGCCGATCAGTACAATTGACTTTCTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATCCTACACAGTAGTGTGGGGAGCCGATCAGTACAATTGACTTTCTG  863

seq1  GCTGTGATAATTGATGACATGATAAAGTAAACAGCTCATCAATGCCTCCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGATAATTGATGACATGATAAAGTAAACAGCTCATCAATGCCTCCA  913

seq1  CAGCTCTATTTAAGGCATCTTGCTTTTTAGCTATGCTTGTGTGTATAATA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTCTATTTAAGGCATCTTGCTTTTTAGCTATGCTTGTGTGTATAATA  963

seq1  AAAATATAATATACTCTGTCTGTATTCGAGTCAGGAAATGTTTCCCTTTA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATAATATACTCTGTCTGTATTCGAGTCAGGAAATGTTTCCCTTTA  1013

seq1  TCTATGCATTGATGATAAAATTAACAAGGGACAGAGGATGCTTGAAGGCT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATGCATTGATGATAAAATTAACAAGGGACAGAGGATGCTTGAAGGCT  1063

seq1  GTCTTAATTTCATTTCTTATCGCTGTGATAAAATACCGTGATACAAACAA  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTAATTTCATTTCTTATCGCTGTGATAAAATACCGTGATACAAACAA  1113

seq1  CTTAGAGCAGTGGGGAGTTATCTGTGCTCAGAATTC  1186
      ||||||||||||||||||||||||||||||||||||
seq2  CTTAGAGCAGTGGGGAGTTATCTGTGCTCAGAATTC  1149


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