BAC Information

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BAC

Clone NameB6Ng01-130C05
Chromosome12 (Build37)
Map Location 94,939,527 - 95,064,987
singlet/doubletdoublet
Overlap genenone
Upstream genenone
Downstream gene2610022K04Rik-ps, EG633639
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-130C05.bB6Ng01-130C05.g
ACCDH931529DH931530
length1,0061,099
definitionDH931529|Mus musculus domesticus DNA, BAC clone: B6Ng01-130C05, 5' end.DH931530|Mus musculus domesticus DNA, BAC clone: B6Ng01-130C05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(94,939,527 - 94,940,511)(95,063,862 - 95,064,987)
sequence
gaattccatctcaatctgcacagaagacctcctctctgctggctggcttt
cctggagacaggaactttctagcatctttggagattctttttatcatcat
cttaaatttgtttgtttatttcttctagattatatgctctttgcatatat
aatgtggtttccagtatttgattttcataggagttttgagtgtgtgaaat
tgtttttattcatttatatttgttcttgttttgtttgtttgtttgtttgt
cctatttccattcatttgggttttttcttttgtgtctgtttcattttatt
ttattttttattatttctcagatgcttatttgttttctgaatgggtcatg
agaggtatggatacagatgaaatggagagtcgtgaggaattggatgagta
gcagtttggtgaagagtagtctgaatattttgtaggaaacaatgcatttt
cagtaaaagaggacaaatctcctgtgtatcctctagttatgaagcaaatt
ctaaagtaatactttaaaaggagtgatagaacaaaatcatcttttataca
tgggccatgacattttgaaaagacagggattacacaatgaaaataacatt
ataaggcatgaaatgccccttaatacgttttttgtcaaggagacaccgga
gttcttcaaaacggcttagtcaattgccagtgcgcttagttatcctctat
agcaaccatagaagatctcataccacaccacacactttgcttgcaggaac
agagaattccatctcaatgtgcacagaagacttcttccctgctggctggc
tttcctggagccaggaagtataacacagactgatagagtaaaaaagaagt
cagtgttcagtcagaaccaacttttgaaactgcaaactgagctatgcgtc
aagatgcacctacaacaccatagtggcagaactgttatagatggaagttg
cagcctggtccacaggcatatatttcataacttttattttgatcataatc
aacacc
gaattctcctttgttaaaagtatttattgtcaacttttaaacatatttat
ttttggagaaatttactctttaatatggctattaatagttttagatataa
taaagtaagcttatattatgaatgaatacaaagtatattcctacctttga
gtgatataatgattttgaaatatttttttatgtttgaaaattggcacaat
ttgcaaggtggatgattttatgttctatcaatgttgatcaaaatagcttt
tgttcattaaaatcaaactacatgatgagtaatttacatatgtgacaaca
ctcatgtacaaaaatgttcttatgaaaacttatgttctgcaaaatgaatg
tggggtaaaataaaataaaatgtttatttttttaaaaaagcaataataaa
aattgtatctaaaaagtacaaagattagcctttgaaattactaaacattt
gttttattttatgattattatattaaaaaatgtcttatcatgtacctcaa
tttaaacttcaacaacacacgcaatcaaaacagatacaatcatgttgtct
tcctgcctcagatttgtgggttttacaattgcaaagtttgtgttattaat
atggatgaaactagcaacagcactccttttagcacacccctaaaccagaa
agttaagtatctgcctaaaagcattgctgaaggtggttctgtttaacatt
catccaggtgaagtagccttttattccaaggaacaacctaggatgtcacc
acaaaagagcagctaatgcctgagttcatataggaccctcttttttatga
gaaaactctgcttgtgattttaagttaacacaaatattcattttatagtt
tcaaacatcccaagacaattaagaattacactgaattcactttgcctgta
ttttagtagacaaaactaggatgatagtatgtgtgcttataacgtgttca
ctaaatgtctaaagtagctattaagtatgcttctcagaaaaaaatgcctt
taaattatactttatggtaatgtactgtcatcagattatagtgaagactc
agggagatagtgtctattccatcacacattcatagatcatgataaattc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_94939527_94940511
seq2: B6Ng01-130C05.b_44_1026

seq1  GAATTCCATCTCAATCTGCACAGAAGACCTCCTCTCTGCTGGCTGGCTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATCTCAATCTGCACAGAAGACCTCCTCTCTGCTGGCTGGCTTT  50

seq1  CCTGGAGACAGGAACTTTCTAGCATCTTTGGAGATTCTTTTTATCATCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGAGACAGGAACTTTCTAGCATCTTTGGAGATTCTTTTTATCATCAT  100

seq1  CTTAAATTTGTTTGTTTATTTCTTCTAGATTATATGCTCTTTGCATATAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAATTTGTTTGTTTATTTCTTCTAGATTATATGCTCTTTGCATATAT  150

seq1  AATGTGGTTTCCAGTATTTGATTTTCATAGGAGTTTTGAGTGTGTGAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGGTTTCCAGTATTTGATTTTCATAGGAGTTTTGAGTGTGTGAAAT  200

seq1  TGTTTTTATTCATTTATATTTGTTCTTGTTTTGTTTGTTTGTTTGTTTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTTATTCATTTATATTTGTTCTTGTTTTGTTTGTTTGTTTGTTTGT  250

seq1  CCTATTTCCATTCATTTGGGTTTTTTCTTTTGTGTCTGTTTCATTTTATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATTTCCATTCATTTGGGTTTTTTCTTTTGTGTCTGTTTCATTTTATT  300

seq1  TTATTTTTTATTATTTCTCAGATGCTTATTTGTTTTCTGAATGGGTCATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTTTATTATTTCTCAGATGCTTATTTGTTTTCTGAATGGGTCATG  350

seq1  AGAGGTATGGATACAGATGAAATGGAGAGTCGTGAGGAATTGGATGAGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGTATGGATACAGATGAAATGGAGAGTCGTGAGGAATTGGATGAGTA  400

seq1  GCAGTTTGGTGAAGAGTAGTCTGAATATTTTGTAGGAAACAATGCATTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTTTGGTGAAGAGTAGTCTGAATATTTTGTAGGAAACAATGCATTTT  450

seq1  CAGTAAAAGAGGACAAATCTCCTGTGTATCCTCTAGTTATGAAGCAAATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAAAAGAGGACAAATCTCCTGTGTATCCTCTAGTTATGAAGCAAATT  500

seq1  CTAAAGTAATACTTTAAAAGGAGTGATAGAACAAAATCATCTTTTATACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAGTAATACTTTAAAAGGAGTGATAGAACAAAATCATCTTTTATACA  550

seq1  TGGGCCATGACATTTTGAAAAGACAGGGATTACACAATGAAAATAACATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCCATGACATTTTGAAAAGACAGGGATTACACAATGAAAATAACATT  600

seq1  ATAAGGCATGAAATGCCCCTTAATACGTTTTTTGTCAAGGAGACACCGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGGCATGAAATGCCCCTTAATACGTTTTTTGTCAAGGAGACACCGGA  650

seq1  GTTCTTCAAAACGGCTTAGTCAATTGCCAGTGCGCTTAGTTATCCTCTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTCAAAACGGCTTAGTCAATTGCCAGTGCGCTTAGTTATCCTCTAT  700

seq1  AGCAACCATAGAAGATCTCATACCACACCACACACTTTGCTTGCAGGAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAACCATAGAAGATCTCATACCACACCACACACTTTGCTTGCAGGAAC  750

seq1  AGAGAATTCCATCTCAATGTGCACAGAAGACTTCTTCCCTGCTGGCTGGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAATTCCATCTCAATGTGCACAGAAGACTTCTTCCCTGCTGGCTGGC  800

seq1  TTTCCTGGAGCCAGGAAGTATAACACAGACTGATAGAGTAAAAAAGAAGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTGGAGCCAGGAAGTATAACACAGACTGATAGAGTAAAAAAGAAGT  850

seq1  CAGTGTTCAGTCAGAACCAACTTTTGAAAACTGCAAAACTGAGCTATGCG  900
      |||||||||||||||||||||||||| ||||||| |||||||||||||||
seq2  CAGTGTTCAGTCAGAACCAACTTTTG-AAACTGC-AAACTGAGCTATGCG  898

seq1  TCAAGATGCACCTACAACACCATAGTGGCAGAACTGTTATAGATGGAAGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGATGCACCTACAACACCATAGTGGCAGAACTGTTATAGATGGAAGT  948

seq1  TGCAGCCTGGTCCACAGGCATATATTTCATAACTT  985
      |||||||||||||||||||||||||||||||||||
seq2  TGCAGCCTGGTCCACAGGCATATATTTCATAACTT  983

seq1: chr12_95063862_95064987
seq2: B6Ng01-130C05.g_69_1167 (reverse)

seq1  GAATTTATACATGGATCTATGAATTGTGTTGATTGAAATAGACACTTTAA  50
      |||||||| ||| |||||||||| |||| ||| || ||||||||||   |
seq2  GAATTTAT-CAT-GATCTATGAA-TGTG-TGA-TGGAATAGACACT---A  42

seq1  TCTCACCTGATGTCTTCACTATAATTCTTTGATGACAAGGTACATTACCA  100
      |||| ||||| |||||||||||||   | ||||||||  |||||||||| 
seq2  TCTC-CCTGA-GTCTTCACTATAA---TCTGATGACA--GTACATTACC-  84

seq1  ATAAAAGGTAATAATTTTAAAGGCATTTTTTTTTCTGAGAAGCATACCTT  150
      |||||  || |||| ||||||||||  ||||||||||||||||||| |||
seq2  ATAAA--GT-ATAA-TTTAAAGGCA--TTTTTTTCTGAGAAGCATA-CTT  127

seq1  AATAGCTACTTTAGGACATTTAGTGAAACACGTTATAAGCACACATACTA  200
      ||||||||||||| ||||||||||| ||||||||||||||||||||||||
seq2  AATAGCTACTTTA-GACATTTAGTG-AACACGTTATAAGCACACATACTA  175

seq1  TCATCCTAGTTTTTGGTTCTACTAAAATACAGGCAAAGTGAATTCAGTGT  250
      |||||||||||||    |||||||||||||||||||||||||||||||||
seq2  TCATCCTAGTTTT---GTCTACTAAAATACAGGCAAAGTGAATTCAGTGT  222

seq1  AATTCTTAATTGTCTTGGGATGTTTGAAACTAT-AAATGAATATTTGTGT  299
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  AATTCTTAATTGTCTTGGGATGTTTGAAACTATAAAATGAATATTTGTGT  272

seq1  TAACTTAAAATCACAAGCAGAGTTTTCTCATAAAAAAGAGGGTCCTATAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTAAAATCACAAGCAGAGTTTTCTCATAAAAAAGAGGGTCCTATAT  322

seq1  GAACTCAGGCATTAGCTGCTCTTTTGTGGTGACATCCTAGGTTGTTCCTT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTCAGGCATTAGCTGCTCTTTTGTGGTGACATCCTAGGTTGTTCCTT  372

seq1  GGAATAAAAGGCTACTTCACCTGGATGAATGTTAAACAGAACCACCTTCA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATAAAAGGCTACTTCACCTGGATGAATGTTAAACAGAACCACCTTCA  422

seq1  GCAATGCTTTTAGGCAGATACTTAACTTTCTGGTTTAGGGGTGTGCTAAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATGCTTTTAGGCAGATACTTAACTTTCTGGTTTAGGGGTGTGCTAAA  472

seq1  AGGAGTGCTGTTGCTAGTTTCATCCATATTAATAACACAAACTTTGCAAT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGTGCTGTTGCTAGTTTCATCCATATTAATAACACAAACTTTGCAAT  522

seq1  TGTAAAACCCACAAATCTGAGGCAGGAAGACAACATGATTGTATCTGTTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAAACCCACAAATCTGAGGCAGGAAGACAACATGATTGTATCTGTTT  572

seq1  TGATTGCGTGTGTTGTTGAAGTTTAAATTGAGGTACATGATAAGACATTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTGCGTGTGTTGTTGAAGTTTAAATTGAGGTACATGATAAGACATTT  622

seq1  TTTAATATAATAATCATAAAATAAAACAAATGTTTAGTAATTTCAAAGGC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATATAATAATCATAAAATAAAACAAATGTTTAGTAATTTCAAAGGC  672

seq1  TAATCTTTGTACTTTTTAGATACAATTTTTATTATTGCTTTTTTAAAAAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCTTTGTACTTTTTAGATACAATTTTTATTATTGCTTTTTTAAAAAA  722

seq1  ATAAACATTTTATTTTATTTTACCCCACATTCATTTTGCAGAACATAAGT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACATTTTATTTTATTTTACCCCACATTCATTTTGCAGAACATAAGT  772

seq1  TTTCATAAGAACATTTTTGTACATGAGTGTTGTCACATATGTAAATTACT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATAAGAACATTTTTGTACATGAGTGTTGTCACATATGTAAATTACT  822

seq1  CATCATGTAGTTTGATTTTAATGAACAAAAGCTATTTTGATCAACATTGA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATGTAGTTTGATTTTAATGAACAAAAGCTATTTTGATCAACATTGA  872

seq1  TAGAACATAAAATCATCCACCTTGCAAATTGTGCCAATTTTCAAACATAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAACATAAAATCATCCACCTTGCAAATTGTGCCAATTTTCAAACATAA  922

seq1  AAAAATATTTCAAAATCATTATATCACTCAAAGGTAGGAATATACTTTGT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATATTTCAAAATCATTATATCACTCAAAGGTAGGAATATACTTTGT  972

seq1  ATTCATTCATAATATAAGCTTACTTTATTATATCTAAAACTATTAATAGC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATTCATAATATAAGCTTACTTTATTATATCTAAAACTATTAATAGC  1022

seq1  CATATTAAAGAGTAAATTTCTCCAAAAATAAATATGTTTAAAAGTTGACA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTAAAGAGTAAATTTCTCCAAAAATAAATATGTTTAAAAGTTGACA  1072

seq1  ATAAATACTTTTAACAAAGGAGAATTC  1126
      |||||||||||||||||||||||||||
seq2  ATAAATACTTTTAACAAAGGAGAATTC  1099