BAC Information

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BAC

Clone NameB6Ng01-130G08
Chromosome12 (Build37)
Map Location 32,290,066 - 32,432,104
singlet/doubletdoublet
Overlap geneBcap29, Dus4l, LOC100043081, Gpr22
Upstream geneLOC100043055, Acp1, Sh3yl1, LOC629656, 9030611O19Rik, LOC668781, LOC100043065, LOC100043514, EG629667, LOC100043068, Lamb1-1, Dld, LOC668786, Slc26a3, Cbll1, Slc26a4, LOC100043531
Downstream geneHbp1, Prkar2b, Pik3cg, 2010109K11Rik, LOC100043548
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-130G08.bB6Ng01-130G08.g
ACCDH931721DH931722
length1,091690
definitionDH931721|Mus musculus domesticus DNA, BAC clone: B6Ng01-130G08, 5' end.DH931722|Mus musculus domesticus DNA, BAC clone: B6Ng01-130G08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,431,006 - 32,432,104)(32,290,066 - 32,290,755)
sequence
gaattcttatagaataagagaaatgtgggcagagacacgcagagaaaatg
acatatgaagacagaaagagatggaatgatccatccataagtcaagcaac
tccaaaggttgctagagtcatgaaagctataaaaggcaaggcaggaatct
ctaagagaagtcaaagccctggcaaccaccttcttccaaactttcaactc
cagaactgtgagacagtacttctgttgctttagcaaactcagtttgcagg
caactaaaacatcttctctttaatatgttcactacttttcaccttcagtc
accccccactttaagcctgaagctacataccaaaagaaataattgaaaat
taaagtccatggacattccacatccacagcaactgcaggagccatttaat
cttgcacaaatgagtgctccctgacatattaccagcaagttctcagactc
tcacagcttaaaagttcttgagctactaaatagggctttttgaaatagat
atttgtaaagaaaaaaataatatttgtaaagagaagttagagatgtggaa
caaaaaattatttggacttgaaatgcaaacatgagatagtttgctaaata
aaatggacactgatatgtcaactcaaacattagtctttctcttgtatcct
ctccttgtctttaaaagattcaagagcatgacaaatgaactgtacaataa
aagacactaaatagatattactaagtgtcattcaaaattttaccttaaaa
ccttgcctgtcccttcctatagaagagctttatagaatattttgatcttt
cagaggactaagaaactgaccttgcaaagttctgagaatatagcatgagt
agcaaagactaagcagggactattatgggcctatatacttctgcttttct
agacatagagtgactactgtcactggcttgagttgcaccttccctagtga
ctataagactgacatttcatgtaattatttgctactttgcttatctcttt
gtagactgtctattcaaattcttacttgtttatctagattatgctaattt
ctgagttgtaagatcctttaataattctgcatttagtactt
gaattcctttttcaaagttttccgctgctctcctcacctgtttcacagca
tacatagagtattaatattttttacatttattagttttgcttgtgtgtat
aatggggaggaggtcacttaggtgtgaccacccacacgtggaggtcagaa
gacaacttgtgggaatgtgttctcttcttctaccacgtgggtcctaggga
ccaaactcaggtcatcaggctaggcagcaagcgtctttaatcactacatt
acacacaggagtggctagaagacactaggcactaagtaactaagtactaa
gtaagtactaagtaactgataacttatcataatgaccaaaatttctttaa
tgaaatgaattactgaggggggtgggcatcaagacaaggtttctttgtgt
agtcctggctgtcctggaacttcctctgtcgattagggctagccttgaac
tcacagagatccatctgcctccgtctcccaagggctgggattaaaggcat
gtgccactactgcccagcctgaaataaatacatttttattttaaataaaa
catttgtgtcatgttttctaaagttttgaatgatattagaagtgaagtat
ctattttatgtgctccaaggcatcgattattcaaacaatggactcccaag
aaatccccccaggtcccgtggggtgtggggtgtggggtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_32431006_32432104
seq2: B6Ng01-130G08.b_50_1140 (reverse)

seq1  AAGTACTTAAATGCAGAATATATAAAGGATTCTTACAACTCAGAAATAAA  50
      |||||| ||||||||||||   ||||||| |||||||||||||||||  |
seq2  AAGTAC-TAAATGCAGAATTATTAAAGGA-TCTTACAACTCAGAAAT-TA  47

seq1  GCATAATCTAGATAAAACAAGTAAAGAATTTGAATAGACAGTCTTACAAA  100
      ||||||||||||| |||||||| |||||||||||||||||||| ||||||
seq2  GCATAATCTAGAT-AAACAAGT-AAGAATTTGAATAGACAGTC-TACAAA  94

seq1  GAGATAAGCAAAGTAGCAAATAATTACATGAAAATTGTCAGTCTTATTAG  150
      |||||||||||||||||||||||||||||||||  ||||||||||| |||
seq2  GAGATAAGCAAAGTAGCAAATAATTACATGAAA--TGTCAGTCTTA-TAG  141

seq1  TCACTAGGG-AGGTGCAACTCAAGCCAGTGACAGTAGTCACTCTATGTCT  199
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TCACTAGGGAAGGTGCAACTCAAGCCAGTGACAGTAGTCACTCTATGTCT  191

seq1  AGAAAAGCAGAAGTATATAGGCCCATAATAGTCCCTGCTTAGTCTTTGCT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAGCAGAAGTATATAGGCCCATAATAGTCCCTGCTTAGTCTTTGCT  241

seq1  ACTCATGCTATATTCTCAGAACTTTGCAAGGTCAGTTTCTTAGTCCTCTG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCATGCTATATTCTCAGAACTTTGCAAGGTCAGTTTCTTAGTCCTCTG  291

seq1  AAAGATCAAAATATTCTATAAAGCTCTTCTATAGGAAGGGACAGGCAAGG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATCAAAATATTCTATAAAGCTCTTCTATAGGAAGGGACAGGCAAGG  341

seq1  TTTTAAGGTAAAATTTTGAATGACACTTAGTAATATCTATTTAGTGTCTT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAGGTAAAATTTTGAATGACACTTAGTAATATCTATTTAGTGTCTT  391

seq1  TTATTGTACAGTTCATTTGTCATGCTCTTGAATCTTTTAAAGACAAGGAG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGTACAGTTCATTTGTCATGCTCTTGAATCTTTTAAAGACAAGGAG  441

seq1  AGGATACAAGAGAAAGACTAATGTTTGAGTTGACATATCAGTGTCCATTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATACAAGAGAAAGACTAATGTTTGAGTTGACATATCAGTGTCCATTT  491

seq1  TATTTAGCAAACTATCTCATGTTTGCATTTCAAGTCCAAATAATTTTTTG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTAGCAAACTATCTCATGTTTGCATTTCAAGTCCAAATAATTTTTTG  541

seq1  TTCCACATCTCTAACTTCTCTTTACAAATATTATTTTTTTCTTTACAAAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCACATCTCTAACTTCTCTTTACAAATATTATTTTTTTCTTTACAAAT  591

seq1  ATCTATTTCAAAAAGCCCTATTTAGTAGCTCAAGAACTTTTAAGCTGTGA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATTTCAAAAAGCCCTATTTAGTAGCTCAAGAACTTTTAAGCTGTGA  641

seq1  GAGTCTGAGAACTTGCTGGTAATATGTCAGGGAGCACTCATTTGTGCAAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCTGAGAACTTGCTGGTAATATGTCAGGGAGCACTCATTTGTGCAAG  691

seq1  ATTAAATGGCTCCTGCAGTTGCTGTGGATGTGGAATGTCCATGGACTTTA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAATGGCTCCTGCAGTTGCTGTGGATGTGGAATGTCCATGGACTTTA  741

seq1  ATTTTCAATTATTTCTTTTGGTATGTAGCTTCAGGCTTAAAGTGGGGGGT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCAATTATTTCTTTTGGTATGTAGCTTCAGGCTTAAAGTGGGGGGT  791

seq1  GACTGAAGGTGAAAAGTAGTGAACATATTAAAGAGAAGATGTTTTAGTTG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGAAGGTGAAAAGTAGTGAACATATTAAAGAGAAGATGTTTTAGTTG  841

seq1  CCTGCAAACTGAGTTTGCTAAAGCAACAGAAGTACTGTCTCACAGTTCTG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCAAACTGAGTTTGCTAAAGCAACAGAAGTACTGTCTCACAGTTCTG  891

seq1  GAGTTGAAAGTTTGGAAGAAGGTGGTTGCCAGGGCTTTGACTTCTCTTAG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTGAAAGTTTGGAAGAAGGTGGTTGCCAGGGCTTTGACTTCTCTTAG  941

seq1  AGATTCCTGCCTTGCCTTTTATAGCTTTCATGACTCTAGCAACCTTTGGA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTCCTGCCTTGCCTTTTATAGCTTTCATGACTCTAGCAACCTTTGGA  991

seq1  GTTGCTTGACTTATGGATGGATCATTCCATCTCTTTCTGTCTTCATATGT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCTTGACTTATGGATGGATCATTCCATCTCTTTCTGTCTTCATATGT  1041

seq1  CATTTTCTCTGCGTGTCTCTGCCCACATTTCTCTTATTCTATAAGAATTC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTCTCTGCGTGTCTCTGCCCACATTTCTCTTATTCTATAAGAATTC  1091

seq1: chr12_32290066_32290755
seq2: B6Ng01-130G08.g_70_759

seq1  GAATTCCTTTTTCAAAGTTTTCCGCTGCTCTCCTCACCTGTTTCACAGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTTTTCAAAGTTTTCCGCTGCTCTCCTCACCTGTTTCACAGCA  50

seq1  TACATAGAGTATTAATATTTTTTACATTTATTAGTTTTGCTTGTGTGTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATAGAGTATTAATATTTTTTACATTTATTAGTTTTGCTTGTGTGTAT  100

seq1  AATGGGGAGGAGGTCACTTAGGTGTGACCACCCACACGTGGAGGTCAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGGGAGGAGGTCACTTAGGTGTGACCACCCACACGTGGAGGTCAGAA  150

seq1  GACAACTTGTGGGAATGTGTTCTCTTCTTCTACCACGTGGGTCCTAGGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAACTTGTGGGAATGTGTTCTCTTCTTCTACCACGTGGGTCCTAGGGA  200

seq1  CCAAACTCAGGTCATCAGGCTAGGCAGCAAGCGTCTTTAATCACTACATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAACTCAGGTCATCAGGCTAGGCAGCAAGCGTCTTTAATCACTACATT  250

seq1  ACACACAGGAGTGGCTAGAAGACACTAGGCACTAAGTAACTAAGTACTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACAGGAGTGGCTAGAAGACACTAGGCACTAAGTAACTAAGTACTAA  300

seq1  GTAAGTACTAAGTAACTGATAACTTATCATAATGACCAAAATTTCTTTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGTACTAAGTAACTGATAACTTATCATAATGACCAAAATTTCTTTAA  350

seq1  TGAAATGAATTACTGAGGGGGGTGGGCATCAAGACAAGGTTTCTTTGTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATGAATTACTGAGGGGGGTGGGCATCAAGACAAGGTTTCTTTGTGT  400

seq1  AGTCCTGGCTGTCCTGGAACTTCCTCTGTCGATTAGGGCTAGCCTTGAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCTGGCTGTCCTGGAACTTCCTCTGTCGATTAGGGCTAGCCTTGAAC  450

seq1  TCACAGAGATCCATCTGCCTCCGTCTCCCAAGGGCTGGGATTAAAGGCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGAGATCCATCTGCCTCCGTCTCCCAAGGGCTGGGATTAAAGGCAT  500

seq1  GTGCCACTACTGCCCAGCCTGAAATAAATACATTTTTATTTTAAATAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCACTACTGCCCAGCCTGAAATAAATACATTTTTATTTTAAATAAAA  550

seq1  CATTTGTGTCATGTTTTCTAAAGTTTTGAATGATATTAGAAGTGAAGTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGTGTCATGTTTTCTAAAGTTTTGAATGATATTAGAAGTGAAGTAT  600

seq1  CTATTTTATGTGCTCCAAGGCATCGATTATTCAAACAATGGACTCCCAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTTATGTGCTCCAAGGCATCGATTATTCAAACAATGGACTCCCAAG  650

seq1  AAATCCCCCCAGGTCCCGTGGGGTGTGGGGTGTGGGGTGT  690
      ||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCCCCCAGGTCCCGTGGGGTGTGGGGTGTGGGGTGT  690