BAC Information

Click to search

BAC

Clone NameB6Ng01-131N20
Chromosome12 (Build37)
Map Location 16,206,294 - 16,355,698
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC217409, Trib2, LOC100043268, EG432636, LOC100043273
Downstream geneLpin1, Ntsr2, Greb1, E2f6, Rock2, Pqlc3, 2410004P03Rik, EG668514, Kcnf1, LOC100043299, Pdia6, Atp6v1c2, Nol10
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-131N20.bB6Ng01-131N20.g
ACCDH932814DH932815
length1,1161,053
definitionDH932814|Mus musculus domesticus DNA, BAC clone: B6Ng01-131N20, 5' end.DH932815|Mus musculus domesticus DNA, BAC clone: B6Ng01-131N20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(16,206,294 - 16,207,417)(16,354,642 - 16,355,698)
sequence
gaattcttcagctgtgtgaagttaaaggttttatttagtacctttgtctg
catccatttcccatagtctggaacaacataccacccctcctctttacctc
tatgaaagggagccaggagcaaaaagggcagtggctgggctagggccaat
atccccttcaagggcttacgtccagttgtctaactgccttccaggagtcc
ccacattgtaaaggtcccaccatctcccatcagtaccactgctggacagt
aagccttcattcaatacatgggcccttagggagacagactaaaataactg
tggcaacatttccagtcttctcatttctttcatggcaatgataagaaaat
atgcaaataggcattataatgtggtaaggatgaaaaatattttataatac
gttatgttaatgagtttgtgagcaacacacactgttaaagattgttggtg
gcagtttaagcatattactcattaagggaaacttcaaaaccagatctcaa
aagaaccaaaatgaaatcattatatcaaagagaaaaatcagatataactt
ttcattcaataatccaggggtttggttgttttttttttttttttggaaaa
tttaatgttactgagaggtttccactaagcacagttccactgtgatgagg
atcacaagggaggacagactcagagggaagagaaattgtcttaaaagtgt
ccagttctaaattcaaatgtgatggtaatgaaaatggaggttgcagacag
gtgatttattgggaactattcatggaatagttccaggtcatttatcctgg
gccagtccgcagagctacacatgatgcatttggtccataactgccttgtg
agcaattacatgctcttcatcagattctcctcctaataagccatatttgt
ctatgggtttcttgtatcttggttcattcctgttcctggatcatttccta
aataagaggtttacctacagtgggtgttcatctgccactcatatctgact
cttcatagaatttcctgtttaagctaaagggatcttgccaccctaagtgg
aacacaatatgaactaccagtaccctcggagcctcggtctctagctgcat
atgtatcgaagatgac
gaattcagaagttgttagtctaatggaaaggctgaacttggagactgtag
accaaggcaggccacaggggacacatgcatccacttactttcttcagtat
ttttttaaaaccataaaataagtttgttacagtgttaaaagtgtactaga
ttctatcccgagaatataattgtctatggccactttgtcttacttgattt
taatctacctttgatttctttctttttcctgtcctttcttgggtgcatag
tgttgcaagattcctgttgtccaggactctgaaggtcttatttgaggagg
attgctttgtctttgagtgctttgtctaggcttctgaaattcaacacacc
taagcacaaactcatattgcatcacccaaacctgactctgccatagatct
tcctctcagatagggctgccatcatctgtagcatttcagagagggattgg
atctatccttcaatcctgccttctggccacctctgctaactagcacaagc
atggcacggtcagatctatggtagtgagcttacaactctgtccttaatac
gtgcatgtttattcattcttactgccaaccaatgcatgacatccacagga
actggtttctgtagctggccagtcctaaccatgatttccaaactcaagga
gatagaagatttttttcttttttatgaccaaatcccaaatcctgatggaa
tagagatacatcaacagaagtaatcagtgtacagcctttcttcatttgct
tagttaagtttcctatcatcagtttacattttctcctaccaaccctgcat
tcttatcaggttttatagttgtgagataaggatccataatatctttaact
cagagaagcagttgaatggtcaatccttccgtcctgatacaggttgtagc
atggtctccacagtacaccagtgatagaacagtgcagactagagccaggt
actccaacatcactaaattgctgaccctgtctatgtaaagtatctcctgc
ctctgtggcttgcccaagtgctcgttctgtcttctgtgggcatcaaggag
gag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_16206294_16207417
seq2: B6Ng01-131N20.b_48_1163

seq1  GAATTCTTCAGCTGTGTGAAGTTAAAGGTTTTATTTAGTACCTTTGTCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCAGCTGTGTGAAGTTAAAGGTTTTATTTAGTACCTTTGTCTG  50

seq1  CATCCATTTCCCATAGTCTGGAACAACATACCACCCCTCCTCTTTACCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCATTTCCCATAGTCTGGAACAACATACCACCCCTCCTCTTTACCTC  100

seq1  TATGAAAGGGAGCCAGGAGCAAAAAGGGCAGTGGCTGGGCTAGGGCCAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAAAGGGAGCCAGGAGCAAAAAGGGCAGTGGCTGGGCTAGGGCCAAT  150

seq1  ATCCCCTTCAAGGGCTTACGTCCAGTTGTCTAACTGCCTTCCAGGAGTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCCTTCAAGGGCTTACGTCCAGTTGTCTAACTGCCTTCCAGGAGTCC  200

seq1  CCACATTGTAAAGGTCCCACCATCTCCCATCAGTACCACTGCTGGACAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATTGTAAAGGTCCCACCATCTCCCATCAGTACCACTGCTGGACAGT  250

seq1  AAGCCTTCATTCAATACATGGGCCCTTAGGGAGACAGACTAAAATAACTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCTTCATTCAATACATGGGCCCTTAGGGAGACAGACTAAAATAACTG  300

seq1  TGGCAACATTTCCAGTCTTCTCATTTCTTTCATGGCAATGATAAGAAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAACATTTCCAGTCTTCTCATTTCTTTCATGGCAATGATAAGAAAAT  350

seq1  ATGCAAATAGGCATTATAATGTGGTAAGGATGAAAAATATTTTATAATAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAAATAGGCATTATAATGTGGTAAGGATGAAAAATATTTTATAATAC  400

seq1  GTTATGTTAATGAGTTTGTGAGCAACACACACTGTTAAAGATTGTTGGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATGTTAATGAGTTTGTGAGCAACACACACTGTTAAAGATTGTTGGTG  450

seq1  GCAGTTTAAGCATATTACTCATTAAGGGAAACTTCAAAACCAGATCTCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTTTAAGCATATTACTCATTAAGGGAAACTTCAAAACCAGATCTCAA  500

seq1  AAGAACCAAAATGAAATCATTATATCAAAGAGAAAAATCAGATATAACTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACCAAAATGAAATCATTATATCAAAGAGAAAAATCAGATATAACTT  550

seq1  TTCATTCAATAATCCAGGGGTTTGGTTGTTTTTTTTTTTTTTTTGGAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTCAATAATCCAGGGGTTTGGTTGTTTTTTTTTTTTTTTTGGAAAA  600

seq1  TTTAATGTTACTGAGAGGTTTCCACTAAGCACAGTTCCACTGTGATGAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATGTTACTGAGAGGTTTCCACTAAGCACAGTTCCACTGTGATGAGG  650

seq1  ATCACAAGGGAGGACAGACTCAGAGGGAAGAGAAATTGTCTTAAAAGTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACAAGGGAGGACAGACTCAGAGGGAAGAGAAATTGTCTTAAAAGTGT  700

seq1  CCAGTTCTAAATTCAAATGTGATGGTAATGAAAATGGAGGTTGCAGACAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTTCTAAATTCAAATGTGATGGTAATGAAAATGGAGGTTGCAGACAG  750

seq1  GTGATTTATTGGGAACTATTCATGGAATAGTTCCAGGTCATTTATCCTGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATTTATTGGGAACTATTCATGGAATAGTTCCAGGTCATTTATCCTGG  800

seq1  GCCAGTCCGCAGAGCTACACATGATGCATTTGGTCCATAACTGCCTTGTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGTCCGCAGAGCTACACATGATGCATTTGGTCCATAACTGCCTTGTG  850

seq1  AGCAATTACATGCTCTTCATCAGATTCTCCTCCTAATAAGCCAATATTTG  900
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  AGCAATTACATGCTCTTCATCAGATTCTCCTCCTAATAAGCC-ATATTTG  899

seq1  TCTTATGGTTTCTTGTATCTTGGTTCATTCCTGTTCCTGGATCATTTCCT  950
      |||   ||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATGGGTTTCTTGTATCTTGGTTCATTCCTGTTCCTGGATCATTTCCT  949

seq1  AAAT-AGAGGTTTACCTACAGTTGAGTGTTTCATCTGCCACTCATATCTG  999
      |||| |||||||||||||||| || ||| |||||||||||||||||||||
seq2  AAATAAGAGGTTTACCTACAG-TGGGTG-TTCATCTGCCACTCATATCTG  997

seq1  ACTCTTCATAGAATTTTCCTGTTTAAGCTAAAGGGATC-TGCAACCCTAT  1048
      ||||||||||||| |||||||||||||||||||||||| ||| ||||  |
seq2  ACTCTTCATAGAA-TTTCCTGTTTAAGCTAAAGGGATCTTGCCACCC--T  1044

seq1  AGGTGGAACAACAATATGAACTACCCAGTACCCCCCGGAG-CTCGTGTCT  1097
      | ||||||| ||||||||||||| |||||| ||| ||||| |||| ||||
seq2  AAGTGGAAC-ACAATATGAACTA-CCAGTA-CCCTCGGAGCCTCG-GTCT  1090

seq1  CTAGCTGCATATGTATCAGAAGATGAC  1124
      ||||||||||||||||| |||||||||
seq2  CTAGCTGCATATGTATC-GAAGATGAC  1116

seq1: chr12_16354642_16355698
seq2: B6Ng01-131N20.g_70_1122 (reverse)

seq1  CTCCT-TTTGATGGCCACAGAAGACCAGGACGGAGCACTTGGGCAAGCCA  49
      |||||  |||||| |||||||||| ||| || ||||||||||||||||||
seq2  CTCCTCCTTGATGCCCACAGAAGA-CAGAAC-GAGCACTTGGGCAAGCCA  48

seq1  CAGAGGCAGGAGATACTTTACATAGACAGGGTCAGCAATTTAGTGATGTT  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGCAGGAGATACTTTACATAGACAGGGTCAGCAATTTAGTGATGTT  98

seq1  GGAGTACCTGGCTCTAGTCTGGCACTGTTCTATCACTGGTTGTACTGTGG  149
      |||||||||||||||||||| |||||||||||||||||| ||||||||||
seq2  GGAGTACCTGGCTCTAGTCT-GCACTGTTCTATCACTGG-TGTACTGTGG  146

seq1  AGTACCATGCTACAACCTGTATCAGGACGGAAGGATTGACCATTTCAACT  199
      || ||||||||||||||||||||||||||||||||||||||| |||||||
seq2  AG-ACCATGCTACAACCTGTATCAGGACGGAAGGATTGACCA-TTCAACT  194

seq1  GCTTCTCTGAGTTAAAGATATTATGGATCCTTATCTCACAACTATAAAAC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GCTTCTCTGAGTTAAAGATATTATGGATCCTTATCTCACAACTATAAAA-  243

seq1  CCTGATAAGAATGCAGGGTTGGTAGGAGAAAATGT-AACTGATGATAGGA  298
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  CCTGATAAGAATGCAGGGTTGGTAGGAGAAAATGTAAACTGATGATAGGA  293

seq1  AACTTAACTAAGCAAATGAAGAAAGGCTGTACACTGATTACTTCTGTTGA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTAACTAAGCAAATGAAGAAAGGCTGTACACTGATTACTTCTGTTGA  343

seq1  TGTATCTCTATTCCATCAGGATTTGGGATTTGGTCAT-AAAAAGAAAAAA  397
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TGTATCTCTATTCCATCAGGATTTGGGATTTGGTCATAAAAAAGAAAAAA  393

seq1  ATCTTCTATCTCCTTGAGTTTGGAAATCATGGTTAGGACTGGCCAGCTAC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCTATCTCCTTGAGTTTGGAAATCATGGTTAGGACTGGCCAGCTAC  443

seq1  AGAAACCAGTTCCTGTGGATGTCATGCATTGGTTGGCAGTAAGAATGAAT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACCAGTTCCTGTGGATGTCATGCATTGGTTGGCAGTAAGAATGAAT  493

seq1  AAACATGCACGTATTAAGGACAGAGTTGTAAGCTCACTACCATAGATCTG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATGCACGTATTAAGGACAGAGTTGTAAGCTCACTACCATAGATCTG  543

seq1  ACCGTGCCATGCTTGTGCTAGTTAGCAGAGGTGGCCAGAAGGCAGGATTG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGTGCCATGCTTGTGCTAGTTAGCAGAGGTGGCCAGAAGGCAGGATTG  593

seq1  AAGGATAGATCCAATCCCTCTCTGAAATGCTACAGATGATGGCAGCCCTA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATAGATCCAATCCCTCTCTGAAATGCTACAGATGATGGCAGCCCTA  643

seq1  TCTGAGAGGAAGATCTATGGCAGAGTCAGGTTTGGGTGATGCAATATGAG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGAGGAAGATCTATGGCAGAGTCAGGTTTGGGTGATGCAATATGAG  693

seq1  TTTGTGCTTAGGTGTGTTGAATTTCAGAAGCCTAGACAAAGCACTCAAAG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGCTTAGGTGTGTTGAATTTCAGAAGCCTAGACAAAGCACTCAAAG  743

seq1  ACAAAGCAATCCTCCTCAAATAAGACCTTCAGAGTCCTGGACAACAGGAA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGCAATCCTCCTCAAATAAGACCTTCAGAGTCCTGGACAACAGGAA  793

seq1  TCTTGCAACACTATGCACCCAAGAAAGGACAGGAAAAAGAAAGAAATCAA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGCAACACTATGCACCCAAGAAAGGACAGGAAAAAGAAAGAAATCAA  843

seq1  AGGTAGATTAAAATCAAGTAAGACAAAGTGGCCATAGACAATTATATTCT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAGATTAAAATCAAGTAAGACAAAGTGGCCATAGACAATTATATTCT  893

seq1  CGGGATAGAATCTAGTACACTTTTAACACTGTAACAAACTTATTTTATGG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGATAGAATCTAGTACACTTTTAACACTGTAACAAACTTATTTTATGG  943

seq1  TTTTAAAAAAATACTGAAGAAAGTAAGTGGATGCATGTGTCCCCTGTGGC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAAAAAATACTGAAGAAAGTAAGTGGATGCATGTGTCCCCTGTGGC  993

seq1  CTGCCTTGGTCTACAGTCTCCAAGTTCAGCCTTTCCATTAGACTAACAAC  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTTGGTCTACAGTCTCCAAGTTCAGCCTTTCCATTAGACTAACAAC  1043

seq1  TTCTGAATTC  1057
      ||||||||||
seq2  TTCTGAATTC  1053