BAC Information

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BAC

Clone NameB6Ng01-131P21
Chromosome12 (Build37)
Map Location 37,878,605 - 37,989,960
singlet/doubletdoublet
Overlap geneMeox2, A530016O06Rik
Upstream geneBzw2, Ankmy2, 1700108M19Rik, Sostdc1, 4930579E17Rik, LOC638858
Downstream geneLOC100043139, Dgkb
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-131P21.bB6Ng01-131P21.g
ACCDH932912DH932913
length1,1111,105
definitionDH932912|Mus musculus domesticus DNA, BAC clone: B6Ng01-131P21, 5' end.DH932913|Mus musculus domesticus DNA, BAC clone: B6Ng01-131P21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(37,988,832 - 37,989,960)(37,878,605 - 37,879,724)
sequence
gaattctgaaagcatccaacaagatccccagtactgtgtgaaatgtaact
tgcatgacagaaagcagaattgtcataactgaggctgaggtcgttttcag
gaaaattgagcaaattgcacaaaatttctagttacacaaagagaatagct
tcagcaattattatacaaaatggcaactatcatgaataatgatattgtat
tttgaaattcaatgagatattcctgtctccactacaaagatactgagttt
gtatgcttagtaaatcaaccgagacattggatacatactttgtaagattg
tataatagaaaataactgtacataattaaatacactttacatcaactaac
ttatttttttagaaataggacaaatcagtgtttttaaattaaaatacatt
ttaaataaaggttatccattttaaataacaacaatataaatgacaaccct
tgttatagataataaagttaatcagaaataatggttcaagtatattcatt
catatactaaaattatagagtaaaaccttttattttctaatttccattta
agttattcagtttacaatgaactttaaaataactttttaaataaatatac
tgatttaattcactgctaaatagaatgaaagagatcaaaaatttactgtt
actttgaaaaaccttgttaagtcagattacatttgatgactgagttctgt
gtttactatttacaacttcctggctaaagacacaggtactgtatgacatg
tcttttttaaaacataaccctacacatctgtcgagcacacatctggacat
gtggccaaactcatcatttccttctgtatatccaggaactgtcagatatt
tcaaagaggagagcggaacaaagttacatccctttttctgttcaggtttc
ataaactacttttttttaccttacccccaggatatcatcaatgtaaaaat
agcagtctgcattccttagcttcagagaagcaagctgggagagatgaggt
gtgggctgtaggatcttctgcttgtcaggtgagggggagctttctctgaa
agctcgactcagatattcttgtgagttatagacagaacttaaagtgccat
gtgaatacaaa
gaattcattaactgagaaaatcccttcacacacagtatcagaggttgagt
atggtgcagctgagtctcccaaagactggctccctttgtgcaggagagtg
gtgccgaagacgtgatcacagagaatttcctactgttatcaacagacaaa
gttggtgttggctgccagagctaaacccccaggttgcttgcaattaagag
caatattttaccctgttacttttatgtatcatttataactttatataatt
tgactttggtgttaagactttaaagcaaaatacatatacaattacatggt
tattaattttccaatgattattttagtgcctaaaatagctaatacttttg
aataaaactgtgaacaaattgtatttttttttaaaaaatgtatatgtaga
atgggcttacaaatgctgtgttaataactatttctgatctgagttttaaa
aaatttattgttactcaaacattttctatgccttattgttttcctaaatc
gatgctgtttttgctggaatttttaaaaataagaaacacacacacacaca
atctcctgtttcttgtatataacagatctggagaagagtcaagtttctta
taaaatattcagagaaaatgaaacttattgtcccaagatgtctttttttt
tctattgtttcttcataatgtttttttttactattattaattattctatt
catgtacatcacaaatgatatcccacttcccggttacccccttcaccaat
tcccatcccatgatatcccacttccagcttacccctccaacaacccccaa
tcccacatctgcctcccccctttgtctgtatgagggtgctatcccaccca
cccacactctccagcccaactgctactttggggtatccaacctccccggg
accaaggacctccctcccattgcaaggccatcctctgctacatatgtatc
tggagccatagatctatccaggtatacacttggttgatggtctagaagtt
tggggcatccagttctagataataataataggcaaaaatatgactgatgg
atacaaaatgcactgttcccagatcaaggcagtgtagtagccctttaata
ttcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_37988832_37989960
seq2: B6Ng01-131P21.b_47_1157 (reverse)

seq1  TTTGTATTCACATTGCACTTTTTTAAAGTCTTGTCTTATAACTTCAC-AG  49
      ||||||||||||| |||||||    ||||  |||| |||||| |||| ||
seq2  TTTGTATTCACATGGCACTTT----AAGTTCTGTC-TATAAC-TCACAAG  44

seq1  AATATCTGAGTCTGAGCCTTTCAGAGAAGGCTCCCCCTTCACCCTGTACA  99
      |||||||||||| ||| ||||||||||| |||||||| ||| |||| |||
seq2  AATATCTGAGTC-GAG-CTTTCAGAGAAAGCTCCCCC-TCA-CCTG-ACA  89

seq1  AGCAGAGATTCCTACAGCCCACACCCTTCATTCTCCTCCCAGCTTGCTTT  149
      ||||||   ||||||||||||||||  ||| ||| |||||||||||| ||
seq2  AGCAGAAGATCCTACAGCCCACACC--TCA-TCT-CTCCCAGCTTGC-TT  134

seq1  CTCTGGAGCTAAGGAATGCAGACTGCTTATTTTTACATTTGATGATATCC  199
      ||||| |||||||||||||||||||| |||||||||| ||||||||||||
seq2  CTCTGAAGCTAAGGAATGCAGACTGC-TATTTTTACA-TTGATGATATCC  182

seq1  TGGGGGTAAAGGTTAAAAAAAAGTAGTTTATGAAACCTGAACAGAAAAA-  248
      |||||||||  | |||||||||||||||||||||||||||||||||||| 
seq2  TGGGGGTAA--GGTAAAAAAAAGTAGTTTATGAAACCTGAACAGAAAAAG  230

seq1  GGATGTAACTTTGTTCCGCTCTCCTCTTTGAAATATCTGACAGTTCCTGG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGTAACTTTGTTCCGCTCTCCTCTTTGAAATATCTGACAGTTCCTGG  280

seq1  ATATACAGAAGGAAATGATGAGTTTGGCCACATGTCCAGATGTGTGCTCG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACAGAAGGAAATGATGAGTTTGGCCACATGTCCAGATGTGTGCTCG  330

seq1  ACAGATGTGTAGGGTTATGTTTTAAAAAAGACATGTCATACAGTACCTGT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATGTGTAGGGTTATGTTTTAAAAAAGACATGTCATACAGTACCTGT  380

seq1  GTCTTTAGCCAGGAAGTTGTAAATAGTAAACACAGAACTCAGTCATCAAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTAGCCAGGAAGTTGTAAATAGTAAACACAGAACTCAGTCATCAAA  430

seq1  TGTAATCTGACTTAACAAGGTTTTTCAAAGTAACAGTAAATTTTTGATCT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATCTGACTTAACAAGGTTTTTCAAAGTAACAGTAAATTTTTGATCT  480

seq1  CTTTCATTCTATTTAGCAGTGAATTAAATCAGTATATTTATTTAAAAAGT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCATTCTATTTAGCAGTGAATTAAATCAGTATATTTATTTAAAAAGT  530

seq1  TATTTTAAAGTTCATTGTAAACTGAATAACTTAAATGGAAATTAGAAAAT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTAAAGTTCATTGTAAACTGAATAACTTAAATGGAAATTAGAAAAT  580

seq1  AAAAGGTTTTACTCTATAATTTTAGTATATGAATGAATATACTTGAACCA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGTTTTACTCTATAATTTTAGTATATGAATGAATATACTTGAACCA  630

seq1  TTATTTCTGATTAACTTTATTATCTATAACAAGGGTTGTCATTTATATTG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTCTGATTAACTTTATTATCTATAACAAGGGTTGTCATTTATATTG  680

seq1  TTGTTATTTAAAATGGATAACCTTTATTTAAAATGTATTTTAATTTAAAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTATTTAAAATGGATAACCTTTATTTAAAATGTATTTTAATTTAAAA  730

seq1  ACACTGATTTGTCCTATTTCTAAAAAAATAAGTTAGTTGATGTAAAGTGT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGATTTGTCCTATTTCTAAAAAAATAAGTTAGTTGATGTAAAGTGT  780

seq1  ATTTAATTATGTACAGTTATTTTCTATTATACAATCTTACAAAGTATGTA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAATTATGTACAGTTATTTTCTATTATACAATCTTACAAAGTATGTA  830

seq1  TCCAATGTCTCGGTTGATTTACTAAGCATACAAACTCAGTATCTTTGTAG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAATGTCTCGGTTGATTTACTAAGCATACAAACTCAGTATCTTTGTAG  880

seq1  TGGAGACAGGAATATCTCATTGAATTTCAAAATACAATATCATTATTCAT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGACAGGAATATCTCATTGAATTTCAAAATACAATATCATTATTCAT  930

seq1  GATAGTTGCCATTTTGTATAATAATTGCTGAAGCTATTCTCTTTGTGTAA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGTTGCCATTTTGTATAATAATTGCTGAAGCTATTCTCTTTGTGTAA  980

seq1  CTAGAAATTTTGTGCAATTTGCTCAATTTTCCTGAAAACGACCTCAGCCT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAAATTTTGTGCAATTTGCTCAATTTTCCTGAAAACGACCTCAGCCT  1030

seq1  CAGTTATGACAATTCTGCTTTCTGTCATGCAAGTTACATTTCACACAGTA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTATGACAATTCTGCTTTCTGTCATGCAAGTTACATTTCACACAGTA  1080

seq1  CTGGGGATCTTGTTGGATGCTTTCAGAATTC  1129
      |||||||||||||||||||||||||||||||
seq2  CTGGGGATCTTGTTGGATGCTTTCAGAATTC  1111

seq1: chr12_37878605_37879724
seq2: B6Ng01-131P21.g_70_1174

seq1  GAATTCATTAACTGAGAAAATCCCTTCACACACAGTATCAGAGGTTGAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTAACTGAGAAAATCCCTTCACACACAGTATCAGAGGTTGAGT  50

seq1  ATGGTGCAGCTGAGTCTCCCAAAGACTGGCTCCCTTTGTGCAGGAGAGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTGCAGCTGAGTCTCCCAAAGACTGGCTCCCTTTGTGCAGGAGAGTG  100

seq1  GTGCCGAAGACGTGATCACAGAGAATTTCCTACTGTTATCAACAGACAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCGAAGACGTGATCACAGAGAATTTCCTACTGTTATCAACAGACAAA  150

seq1  GTTGGTGTTGGCTGCCAGAGCTAAACCCCCAGGTTGCTTGCAATTAAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGTGTTGGCTGCCAGAGCTAAACCCCCAGGTTGCTTGCAATTAAGAG  200

seq1  CAATATTTTACCCTGTTACTTTTATGTATCATTTATAACTTTATATAATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATTTTACCCTGTTACTTTTATGTATCATTTATAACTTTATATAATT  250

seq1  TGACTTTGGTGTTAAGACTTTAAAGCAAAATACATATACAATTACATGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTTGGTGTTAAGACTTTAAAGCAAAATACATATACAATTACATGGT  300

seq1  TATTAATTTTCCAATGATTATTTTAGTGCCTAAAATAGCTAATACTTTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAATTTTCCAATGATTATTTTAGTGCCTAAAATAGCTAATACTTTTG  350

seq1  AATAAAACTGTGAACAAATTGTATTTTTTTTTAAAAAATGTATATGTAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAACTGTGAACAAATTGTATTTTTTTTTAAAAAATGTATATGTAGA  400

seq1  ATGGGCTTACAAATGCTGTGTTAATAACTATTTCTGATCTGAGTTTTAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGCTTACAAATGCTGTGTTAATAACTATTTCTGATCTGAGTTTTAAA  450

seq1  AAATTTATTGTTACTCAAACATTTTCTATGCCTTATTGTTTTCCTAAATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTATTGTTACTCAAACATTTTCTATGCCTTATTGTTTTCCTAAATC  500

seq1  GATGCTGTTTTTGCTGGAATTTTTAAAAATAAGAAACACACACACACACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTGTTTTTGCTGGAATTTTTAAAAATAAGAAACACACACACACACA  550

seq1  ATCTCCTGTTTCTTGTATATAACAGATCTGGAGAAGAGTCAAGTTTCTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCCTGTTTCTTGTATATAACAGATCTGGAGAAGAGTCAAGTTTCTTA  600

seq1  TAAAATATTCAGAGAAAATGAAACTTATTGTCCCAAGATGTCTTTTTTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATATTCAGAGAAAATGAAACTTATTGTCCCAAGATGTCTTTTTTTT  650

seq1  TCTATTGTTTCTTCATAATGTTTTTTTTTACTATTATTAATTATTCTATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTGTTTCTTCATAATGTTTTTTTTTACTATTATTAATTATTCTATT  700

seq1  CATGTACATCACAAATGATATCCCACTTCCCGGTTACCCCCTTCACCAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTACATCACAAATGATATCCCACTTCCCGGTTACCCCCTTCACCAAT  750

seq1  TCCCATCCCATGATATCCCACTTCCAGCTTACCCCTCCAACAACCCCCAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATCCCATGATATCCCACTTCCAGCTTACCCCTCCAACAACCCCCAA  800

seq1  TCCCACATCTGCCTCCCCCCTTTGTCTGTATGAGGGTGCTATCCCACCCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCACATCTGCCTCCCCCCTTTGTCTGTATGAGGGTGCTATCCCACCCA  850

seq1  CCCACACTCTCCAGCCCAACTGCTACTTTGGGGTATCCAACCTCCCCGGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACACTCTCCAGCCCAACTGCTACTTTGGGGTATCCAACCTCCCCGGG  900

seq1  ACCAAGGACCTCCCTCCCATTGCAAGGCCATCCTCTGCTACATATGTATC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAGGACCTCCCTCCCATTGCAAGGCCATCCTCTGCTACATATGTATC  950

seq1  TGGAGCCATAGATCTATCCAGGTATACACCTTGGTTGATGGTCTAG-AGT  999
      |||||||||||||||||||||||||||| ||||||||||||||||| |||
seq2  TGGAGCCATAGATCTATCCAGGTATACA-CTTGGTTGATGGTCTAGAAGT  999

seq1  TTGGGGCATCCAGTTTCTAGATAAATAAATAATAAGGCAAAAAATTATGA  1049
      ||||||||||||| ||||||||||   |||||| |||||||||  |||||
seq2  TTGGGGCATCCAG-TTCTAGATAA--TAATAAT-AGGCAAAAA--TATGA  1043

seq1  CTGAAGGGAATTACAAAAATGCACTGTTTCACAGAATCAAGGCAAGTTGT  1099
      |||| ||    ||| ||||||||||| ||| ||| |||||||||   |||
seq2  CTGATGG---ATAC-AAAATGCACTG-TTCCCAG-ATCAAGGCA--GTGT  1085

seq1  AGTAGCCCTTTTAATATTCTA  1120
      |||||||| ||||||||||||
seq2  AGTAGCCC-TTTAATATTCTA  1105