BAC Information

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BAC

Clone NameB6Ng01-132B14
Chromosome12 (Build37)
Map Location 8,383,987 - 8,493,382
singlet/doubletdoublet
Overlap geneBC106175
Upstream geneLOC668380, EG668388, Apob, 1110057K04Rik, Gdf7, Hs1bp3
Downstream geneRhob, Slc7a15, LOC100043154, Pum2, F730043H23, Sdc1, Laptm4a, Matn3, Wdr35, Ttc32, LOC633030, LOC100042238
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-132B14.bB6Ng01-132B14.g
ACCDH932989DH932990
length4951,024
definitionDH932989|Mus musculus domesticus DNA, BAC clone: B6Ng01-132B14, 5' end.DH932990|Mus musculus domesticus DNA, BAC clone: B6Ng01-132B14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(8,383,987 - 8,384,487)(8,492,345 - 8,493,382)
sequence
cactatattttttcttaaatctccttgatgcatttgtcagatggtttcca
gaagagctgcctctggcttgagtgcctccctttgtgagaactcttgtctg
ctccaatttagggtaataccataaagagaatcttattagctgggctgtgg
tgactcacacctttgatcccagcactttgggaggcagagccaggcggata
tctgagttcaaggccagcctggtctacagagtgagtttcaggacagccaa
ggctacacagagaaaccctgtctcaaaaaacaaacaaaaaaaaagagaga
gagaatcttattatctgaaagacaaataatggccctgacaagtgggtcag
agggcctttgcctcttcttcatttctctattttgggtaacttttgagaaa
acatccttttcctaaatatgttttcctgggaacatatgggttgttcttgc
ctttttcctcctccctagagactagaatgttgaggggggagggga
gaattctttgaggcagagtcttctgaatgtctgaggtcttaataaacaga
ataataacaatacatacattaagaatcttatatggttttttcccttggaa
aaaaacataaaatttagagggcaagattctctgtaggtagtaactttttt
tttttttttttttttaaagatttatttatttattatatgtaagtacactg
tagctgtcttcagacactccagaagagggcgtcagatcttgttacagatg
gttgtgagccaccatgtggttgctgggatttgaactcctgaccttcggaa
gagcagtcaggtgctcttacccactgagccatctcaccagccccgtagta
actttttctctggacttttagggtctgggaggggcaagtttctgatgctt
cagaacttgggacaactatcattcaatttctatggcagctttccttgatc
tttcaagactggagcgagttggtccggtttctgtggttaactgggcagtg
ctatagcctgggtaaattataaggcaaaaggcccctggctctggaggttt
aagaataagaggtacatttgatgatggttttctagtcccaagagagcaca
agacatcacatggcaagagaaaggaaaacacacacacacacacacacaca
cacacacacacacacacacacgtatgtatatgtacatgtatgagtgtgtg
tatatcttttagtttttctctttcacaaagccaccagtaattcaagcatt
actctactctgatgacattatctaatcctattcaccacccagaagcccct
tatagctggtatatagtcataccttcttaattccttacacggttattata
tttcaaaaccttaactcctgggaaagatggagggaagatgctccagtcac
gcagtatcatataaatactaggaagttgtgttagctcatagctacatcca
gtgaagctcgaatgttgctgtgaatggaagaaatgagctattgtagctca
tctgctttctctcttctctctccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_8383987_8384487
seq2: B6Ng01-132B14.b_48_548

seq1  GAATTCCACTATATTTTTTCTTAAATCTCCTTGATGCATTTGTCAGATGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACTATATTTTTTCTTAAATCTCCTTGATGCATTTGTCAGATGG  50

seq1  TTTCCAGAAGAGCTGCCTCTGGCTTGAGTGCCTCCCTTTGTGAGAACTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAGAAGAGCTGCCTCTGGCTTGAGTGCCTCCCTTTGTGAGAACTCT  100

seq1  TGTCTGCTCCAATTTAGGGTAATACCATAAAGAGAATCTTATTAGCTGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGCTCCAATTTAGGGTAATACCATAAAGAGAATCTTATTAGCTGGG  150

seq1  CTGTGGTGACTCACACCTTTGATCCCAGCACTTTGGGAGGCAGAGCCAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGTGACTCACACCTTTGATCCCAGCACTTTGGGAGGCAGAGCCAGG  200

seq1  CGGATATCTGAGTTCAAGGCCAGCCTGGTCTACAGAGTGAGTTTCAGGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGATATCTGAGTTCAAGGCCAGCCTGGTCTACAGAGTGAGTTTCAGGAC  250

seq1  AGCCAAGGCTACACAGAGAAACCCTGTCTCAAAAAACAAACAAAAAAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAAGGCTACACAGAGAAACCCTGTCTCAAAAAACAAACAAAAAAAAA  300

seq1  GAGAGAGAGAATCTTATTATCTGAAAGACAAATAATGGCCCTGACAAGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAATCTTATTATCTGAAAGACAAATAATGGCCCTGACAAGTG  350

seq1  GGTCAGAGGGCCTTTGCCTCTTCTTCATTTCTCTATTTTGGGTAACTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAGAGGGCCTTTGCCTCTTCTTCATTTCTCTATTTTGGGTAACTTTT  400

seq1  GAGAAAACATCCTTTTCCTAAATATGTTTTCCTGGGAACATATGGGTTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAACATCCTTTTCCTAAATATGTTTTCCTGGGAACATATGGGTTGT  450

seq1  TCTTGCCTTTTTCCTCCTCCCTAGAGACTAGAATGTTGAGGGGGGAGGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGCCTTTTTCCTCCTCCCTAGAGACTAGAATGTTGAGGGGGGAGGGG  500

seq1  A  501
      |
seq2  A  501

seq1: chr12_8492345_8493382
seq2: B6Ng01-132B14.g_68_1091 (reverse)

seq1  GGGAGAGAGAAGAGGAGGAGAAGGCAGATGAAGGCTACAATAGCTCAATT  50
      |||||||||||||    ||||| ||||||||  ||||||||||||| |||
seq2  GGGAGAGAGAAGA----GAGAAAGCAGATGA--GCTACAATAGCTC-ATT  43

seq1  TCTTCCATTCCACAAGCAACATTCGAGCTTCACTGGATGTAGCTATGAAG  100
      ||||||||| ||| ||||||||||||||||||||||||||||||||| ||
seq2  TCTTCCATT-CAC-AGCAACATTCGAGCTTCACTGGATGTAGCTATG-AG  90

seq1  CTAAACACAACCTTCCTAGTATTTATATGATACCTGCGTGACTGGGGCAT  150
      || ||||||| ||||||||||||||||||||| |||||||||||| ||||
seq2  CT-AACACAA-CTTCCTAGTATTTATATGATA-CTGCGTGACTGGAGCAT  137

seq1  CTTCCCTCCATCTTTCCCAGGAGTTAAGGTTTTGAAATATAATGACCGTT  200
      ||||||||||||||||||||||||||||||||||||||||||| |||| |
seq2  CTTCCCTCCATCTTTCCCAGGAGTTAAGGTTTTGAAATATAATAACCG-T  186

seq1  GTAAGGAATTAAGAAGGTATGACTATATACCAGCTATAAGGGGCTTCTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGGAATTAAGAAGGTATGACTATATACCAGCTATAAGGGGCTTCTGG  236

seq1  GTGGTGAATAGGATTAGATAATGTCATCAGAGTAGAGTAATGCTTGAATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTGAATAGGATTAGATAATGTCATCAGAGTAGAGTAATGCTTGAATT  286

seq1  ACTGGTGGCTTTGTGAAAGAGAAAAACTAAAAGATATACACACACTCATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGTGGCTTTGTGAAAGAGAAAAACTAAAAGATATACACACACTCATA  336

seq1  CATGTACATATACATACGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTACATATACATACGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  386

seq1  TGTGTGTGTGTTTTCCTTTCTCTTGCCATGTGATGTCTTGTGCTCTCTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTTTTCCTTTCTCTTGCCATGTGATGTCTTGTGCTCTCTTG  436

seq1  GGACTAGAAAACCATCATCAAATGTACCTCTTATTCTTAAACCTCCAGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTAGAAAACCATCATCAAATGTACCTCTTATTCTTAAACCTCCAGAG  486

seq1  CCAGGGGCCTTTTGCCTTATAATTTACCCAGGCTATAGCACTGCCCAGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGGGCCTTTTGCCTTATAATTTACCCAGGCTATAGCACTGCCCAGTT  536

seq1  AACCACAGAAACCGGACCAACTCGCTCCAGTCTTGAAAGATCAAGGAAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCACAGAAACCGGACCAACTCGCTCCAGTCTTGAAAGATCAAGGAAAG  586

seq1  CTGCCATAGAAATTGAATGATAGTTGTCCCAAGTTCTGAAGCATCAGAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCATAGAAATTGAATGATAGTTGTCCCAAGTTCTGAAGCATCAGAAA  636

seq1  CTTGCCCCTCCCAGACCCTAAAAGTCCAGAGAAAAAGTTACTACGGGGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCCCCTCCCAGACCCTAAAAGTCCAGAGAAAAAGTTACTACGGGGCT  686

seq1  GGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTGCTCTTCCGAAGGTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTGCTCTTCCGAAGGTCA  736

seq1  GGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAACAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAACAA  786

seq1  GATCTGACGCCCTCTTCTGGAGTGTCTGAAGACAGCTACAGTGTACTTAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTGACGCCCTCTTCTGGAGTGTCTGAAGACAGCTACAGTGTACTTAC  836

seq1  ATATAATAAATAAATAAATCTTTAAAAAAAAAAAAAAAAAAAAAGTTACT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAATAAATAAATAAATCTTTAAAAAAAAAAAAAAAAAAAAAGTTACT  886

seq1  ACCTACAGAGAATCTTGCCCTCTAAATTTTATGTTTTTTTCCAAGGGAAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTACAGAGAATCTTGCCCTCTAAATTTTATGTTTTTTTCCAAGGGAAA  936

seq1  AAACCATATAAGATTCTTAATGTATGTATTGTTATTATTCTGTTTATTAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCATATAAGATTCTTAATGTATGTATTGTTATTATTCTGTTTATTAA  986

seq1  GACCTCAGACATTCAGAAGACTCTGCCTCAAAGAATTC  1038
      ||||||||||||||||||||||||||||||||||||||
seq2  GACCTCAGACATTCAGAAGACTCTGCCTCAAAGAATTC  1024