BAC Information

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BAC

Clone NameB6Ng01-132K06
Chromosome12 (Build37)
Map Location 8,964,564 - 9,106,856
singlet/doubletdoublet
Overlap geneMatn3, Wdr35, Ttc32
Upstream geneApob, 1110057K04Rik, Gdf7, Hs1bp3, BC106175, Rhob, Slc7a15, LOC100043154, Pum2, F730043H23, Sdc1, Laptm4a
Downstream geneLOC633030, LOC100042238, Osr1, LOC382567
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-132K06.bB6Ng01-132K06.g
ACCDH933393DH933394
length178815
definitionDH933393|Mus musculus domesticus DNA, BAC clone: B6Ng01-132K06, 5' end.DH933394|Mus musculus domesticus DNA, BAC clone: B6Ng01-132K06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(9,106,679 - 9,106,856)(8,964,564 - 8,965,378)
sequence
aagatgtatgcaaaacaggaagaaccacactgggtatcttctggaatcct
ggagaggtggcaggacttgttttagcctatctggcaaaaaaaagaaaaaa
gaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaaga
aagaagaagaagaagaagaaggaggagg
gaattctgctcactggtatttaaacaccacacagagttaacgaagaatag
agtttagactttttttctttcagatttttttccctttaattctaggagag
attttgtgaggaagaaaactgatcatttaggtcaaactgctaattttatg
gatagggaagctgagatgcaaagaagggaagggatatatgtatcagtgtt
aggatccgaaaatccaaaacaacccaagcagtcgcaagagtctagcaaag
caagacctttatttgcattaggcataaaaacctgagtagtcagtgacaac
aacacacactcaggggttgactgcatccttgaacagtcatcttaggaagt
atttaaccagatggcaaaagttactgtactcaggctgctagcgatcgatc
gggccgcagaacaggcttgggagttgaactgcaacctggagcaagagtgt
tacagaatttttaagcctgaaatctacaaacatctatgccaagttatccc
actaatcaggatttagggatagaagacgtccttaggaacatgactttgtg
gtacgcttatcctgttcccattggttgggttattcaactgtggtggggca
acttgcctagcattctcaaccaggatgtcggttacccacggaagtcctgg
gaactaaagctttatttgacccctactcaagatggaagttctgttcaaaa
tggcttcagtttggttccttacatcagtgagtttgttggtggaagaacaa
gaccagaaattccatcagttccctttcctgtgcccactccctccattctc
tctccctctccctcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_9106679_9106856
seq2: B6Ng01-132K06.b_54_231 (reverse)

seq1  CCTCCTCCTTCTTCTTCTTCTTCTTCTTTCTTTCTTTCTTTCTTTCTTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTCCTTCTTCTTCTTCTTCTTCTTTCTTTCTTTCTTTCTTTCTTTC  50

seq1  TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTTCTTTTTTTTGCCAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTTCTTTTTTTTGCCAGAT  100

seq1  AGGCTAAAACAAGTCCTGCCACCTCTCCAGGATTCCAGAAGATACCCAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTAAAACAAGTCCTGCCACCTCTCCAGGATTCCAGAAGATACCCAGT  150

seq1  GTGGTTCTTCCTGTTTTGCATACATCTT  178
      ||||||||||||||||||||||||||||
seq2  GTGGTTCTTCCTGTTTTGCATACATCTT  178

seq1: chr12_8964564_8965378
seq2: B6Ng01-132K06.g_66_880

seq1  GAATTCTGCTCACTGGTATTTAAACACCACACAGAGTTAACGAAGAATAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGCTCACTGGTATTTAAACACCACACAGAGTTAACGAAGAATAG  50

seq1  AGTTTAGACTTTTTTTCTTTCAGATTTTTTTCCCTTTAATTCTAGGAGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTAGACTTTTTTTCTTTCAGATTTTTTTCCCTTTAATTCTAGGAGAG  100

seq1  ATTTTGTGAGGAAGAAAACTGATCATTTAGGTCAAACTGCTAATTTTATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGTGAGGAAGAAAACTGATCATTTAGGTCAAACTGCTAATTTTATG  150

seq1  GATAGGGAAGCTGAGATGCAAAGAAGGGAAGGGATATATGTATCAGTGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGGGAAGCTGAGATGCAAAGAAGGGAAGGGATATATGTATCAGTGTT  200

seq1  AGGATCCGAAAATCCAAAACAACCCAAGCAGTCGCAAGAGTCTAGCAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATCCGAAAATCCAAAACAACCCAAGCAGTCGCAAGAGTCTAGCAAAG  250

seq1  CAAGACCTTTATTTGCATTAGGCATAAAAACCTGAGTAGTCAGTGACAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGACCTTTATTTGCATTAGGCATAAAAACCTGAGTAGTCAGTGACAAC  300

seq1  AACACACACTCAGGGGTTGACTGCATCCTTGAACAGTCATCTTAGGAAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACACACTCAGGGGTTGACTGCATCCTTGAACAGTCATCTTAGGAAGT  350

seq1  ATTTAACCAGATGGCAAAAGTTACTGTACTCAGGCTGCTAGCGATCGATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAACCAGATGGCAAAAGTTACTGTACTCAGGCTGCTAGCGATCGATC  400

seq1  GGGCCGCAGAACAGGCTTGGGAGTTGAACTGCAACCTGGAGCAAGAGTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCGCAGAACAGGCTTGGGAGTTGAACTGCAACCTGGAGCAAGAGTGT  450

seq1  TACAGAATTTTTAAGCCTGAAATCTACAAACATCTATGCCAAGTTATCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGAATTTTTAAGCCTGAAATCTACAAACATCTATGCCAAGTTATCCC  500

seq1  ACTAATCAGGATTTAGGGATAGAAGACGTCCTTAGGAACATGACTTTGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAATCAGGATTTAGGGATAGAAGACGTCCTTAGGAACATGACTTTGTG  550

seq1  GTACGCTTATCCTGTTCCCATTGGTTGGGTTATTCAACTGTGGTGGGGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACGCTTATCCTGTTCCCATTGGTTGGGTTATTCAACTGTGGTGGGGCA  600

seq1  ACTTGCCTAGCATTCTCAACCAGGATGTCGGTTACCCACGGAAGTCCTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGCCTAGCATTCTCAACCAGGATGTCGGTTACCCACGGAAGTCCTGG  650

seq1  GAACTAAAGCTTTATTTGACCCCTACTCAAGATGGAAGTTCTGTTCAAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTAAAGCTTTATTTGACCCCTACTCAAGATGGAAGTTCTGTTCAAAA  700

seq1  TGGCTTCAGTTTGGTTCCTTACATCAGTGAGTTTGTTGGTGGAAGAACAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTCAGTTTGGTTCCTTACATCAGTGAGTTTGTTGGTGGAAGAACAA  750

seq1  GACCAGAAATTCCATCAGTTCCCTTTCCTGTGCCCACTCCCTCCATTCTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAGAAATTCCATCAGTTCCCTTTCCTGTGCCCACTCCCTCCATTCTC  800

seq1  TCTCCCTCTCCCTCC  815
      |||||||||||||||
seq2  TCTCCCTCTCCCTCC  815