BAC Information

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BAC

Clone NameB6Ng01-132O02
Chromosome12 (Build37)
Map Location 90,050,655 - 90,161,941
singlet/doubletdoublet
Overlap geneEG666915
Upstream geneBB287469, LOC100038964, LOC673658, LOC100038992, LOC100038982, LOC674027, LOC100039042, LOC100039052, LOC100039076, LOC100039087, LOC100039100, LOC100039191, LOC100039203, LOC627873, LOC100039162, LOC627881, LOC100039129, LOC636517, LOC544884, LOC100039226, LOC432715, EG667350, LOC546543, EG667388, LOC627971, LOC667395, LOC100039315, EG638008, EG666862, EG435337, LOC100039154, LOC633093, LOC667440, LOC100039383, EG266459, LOC667475, LOC620915, LOC435314, Adck1, LOC100039261
Downstream geneNrxn3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-132O02.bB6Ng01-132O02.g
ACCDH933573DH933574
length1,176317
definitionDH933573|Mus musculus domesticus DNA, BAC clone: B6Ng01-132O02, 5' end.DH933574|Mus musculus domesticus DNA, BAC clone: B6Ng01-132O02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(90,160,749 - 90,161,941)(90,050,655 - 90,050,971)
sequence
gaattctgaacaaacttgtcaaatgagcttgatgctcttattagaaatac
caagacaagcaagaaagtagaaacaaggtagaagaaaagagaagaataac
aagtagatgccagcatttggggaagtacaaaattaaaagtccaaaagtga
gaaacgggaccacatgcaaagaagcctcaagagtcatcacatatataata
atagaagttacctgtaactaaactcaactgacaagcaccattgcatgtgg
tacctcttccagagaggtacctcttccacagagagaggacttctctgagc
cttgttttccttgtctctaaaataggaacaacaaacactgtttacctctc
caaatcctgtacagagtaaacttcatcagttccattccacagctggataa
aacacaatgcaaacaagaatcacaagtgcctggtccccaggcttcataca
ttccagaactagaattggagcctagatcatgactccaagctcagcaccag
actctcagcaccagtgctatccaaaactaatggacaggcttataatctga
gtaagagtaaagcagtgtttactctggaaccctgtcctagcttagaacta
aaccaggacttcatggggttaggatatgacctctcagagctatggctcaa
gtcttccttaggataccccgaaacatcataaatccaatttttggagtttg
gcaactcaccacagttcaatgttctataaaatttatctatgagtttccat
atctccaatttcttacatcctatttctctaagcaaaatctacatctgacc
cctaatatcacacccttactaggggacttgctactgcagtgtccatccct
gccttgggtgcttgggtaactgctgtggctttctgtattgtcttcatgtg
ctctccagtccttccccgcataaaacatgttttttgtttgttatgttgtt
caattatcaaacctctaagcagcttaatgggataaaggataagaaaacct
gtctaatttagtaggctaaatatgatatttttagcattgatgtcatcctt
tctatggtaaagccgcaaagcatttcttggcaacagattttggaatacag
cttcactgtctagagtgactttattagacattatcagctgtctgtagcag
gacatgtacaaaacttttaacctccc
acttgtgtttgctttatctctacccaggggtggggtgcttgaagaggaag
caaaatgttttattaaggaagtaaaggctgagcctgggctgccggctcgc
tggctcacttccctcctcccatgtctgactctctggggctgagagtgggg
gctgtgcccatgttgcaaatgcttgctctgcagcacagttttccaggaat
ttcaggacacaggaattttcacccagctgtgttgcgtgttgctgttcagc
agtctgaagttgcttatccagcgtaagtcagaatggggagcctagggagg
aggtggggcgggggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_90160749_90161941
seq2: B6Ng01-132O02.b_49_1224 (reverse)

seq1  GGGAGGGGTATAAAGGTTTTGTACATGCTCCTTGCTTACAGACAGCTGAT  50
      ||||||    |||| |||||||||||| ||| ||| ||||||||||||||
seq2  GGGAGG---TTAAAAGTTTTGTACATG-TCC-TGC-TACAGACAGCTGAT  44

seq1  -ATG-CTAATTAAAAGTCACTCCTAGACAGTGAAGCTGGTATTCCAAAAT  98
       ||| |||||  ||||||||| ||||||||||||||| ||||||||||||
seq2  AATGTCTAAT--AAAGTCACT-CTAGACAGTGAAGCT-GTATTCCAAAAT  90

seq1  CTTGTTGCCAAGAAATGCTTTGCGGCTTTTACCATAGGAAAGGATGACAA  148
      | |||||||||||||||||||||||| ||||||||| ||||||||||| |
seq2  C-TGTTGCCAAGAAATGCTTTGCGGC-TTTACCATA-GAAAGGATGAC-A  136

seq1  TCAATGCTTAAAATATCATTATTTAGCCTTACTAAATTAGACAGGTTTTC  198
      |||||||| ||||||||| ||||||||| |||||||||||||||||||||
seq2  TCAATGCTAAAAATATCA-TATTTAGCC-TACTAAATTAGACAGGTTTTC  184

seq1  TTTATCCTTTATCCCATTAAGCTTGCTTAGAGGTTTGATAATTGAACAAC  248
       ||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  -TTATCCTTTATCCCATTAAGC-TGCTTAGAGGTTTGATAATTGAACAAC  232

seq1  AATAACAAACAAAAAACATGTTTTATGCGGGGAAGGACTGGAGAGCACAT  298
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -ATAACAAACAAAAAACATGTTTTATGCGGGGAAGGACTGGAGAGCACAT  281

seq1  GAAGACAATACAGAAAGCCACAGCAGTTACCCAAGCACCCAAGGCAGGGA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGACAATACAGAAAGCCACAGCAGTTACCCAAGCACCCAAGGCAGGGA  331

seq1  TGGACACTGCAGTAGCAAGTCCCCTAGTAAGGGTGTGATATTAGGGGTCA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACACTGCAGTAGCAAGTCCCCTAGTAAGGGTGTGATATTAGGGGTCA  381

seq1  GATGTAGATTTTGCTTAGAGAAATAGGATGTAAGAAATTGGAGATATGGA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTAGATTTTGCTTAGAGAAATAGGATGTAAGAAATTGGAGATATGGA  431

seq1  AACTCATAGATAAATTTTATAGAACATTGAACTGTGGTGAGTTGCCAAAC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCATAGATAAATTTTATAGAACATTGAACTGTGGTGAGTTGCCAAAC  481

seq1  TCCAAAAATTGGATTTATGATGTTTCGGGGTATCCTAAGGAAGACTTGAG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAAAATTGGATTTATGATGTTTCGGGGTATCCTAAGGAAGACTTGAG  531

seq1  CCATAGCTCTGAGAGGTCATATCCTAACCCCATGAAGTCCTGGTTTAGTT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAGCTCTGAGAGGTCATATCCTAACCCCATGAAGTCCTGGTTTAGTT  581

seq1  CTAAGCTAGGACAGGGTTCCAGAGTAAACACTGCTTTACTCTTACTCAGA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGCTAGGACAGGGTTCCAGAGTAAACACTGCTTTACTCTTACTCAGA  631

seq1  TTATAAGCCTGTCCATTAGTTTTGGATAGCACTGGTGCTGAGAGTCTGGT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAGCCTGTCCATTAGTTTTGGATAGCACTGGTGCTGAGAGTCTGGT  681

seq1  GCTGAGCTTGGAGTCATGATCTAGGCTCCAATTCTAGTTCTGGAATGTAT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGCTTGGAGTCATGATCTAGGCTCCAATTCTAGTTCTGGAATGTAT  731

seq1  GAAGCCTGGGGACCAGGCACTTGTGATTCTTGTTTGCATTGTGTTTTATC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCCTGGGGACCAGGCACTTGTGATTCTTGTTTGCATTGTGTTTTATC  781

seq1  CAGCTGTGGAATGGAACTGATGAAGTTTACTCTGTACAGGATTTGGAGAG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGTGGAATGGAACTGATGAAGTTTACTCTGTACAGGATTTGGAGAG  831

seq1  GTAAACAGTGTTTGTTGTTCCTATTTTAGAGACAAGGAAAACAAGGCTCA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAACAGTGTTTGTTGTTCCTATTTTAGAGACAAGGAAAACAAGGCTCA  881

seq1  GAGAAGTCCTCTCTCTGTGGAAGAGGTACCTCTCTGGAAGAGGTACCACA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGTCCTCTCTCTGTGGAAGAGGTACCTCTCTGGAAGAGGTACCACA  931

seq1  TGCAATGGTGCTTGTCAGTTGAGTTTAGTTACAGGTAACTTCTATTATTA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAATGGTGCTTGTCAGTTGAGTTTAGTTACAGGTAACTTCTATTATTA  981

seq1  TATATGTGATGACTCTTGAGGCTTCTTTGCATGTGGTCCCGTTTCTCACT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGTGATGACTCTTGAGGCTTCTTTGCATGTGGTCCCGTTTCTCACT  1031

seq1  TTTGGACTTTTAATTTTGTACTTCCCCAAATGCTGGCATCTACTTGTTAT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGACTTTTAATTTTGTACTTCCCCAAATGCTGGCATCTACTTGTTAT  1081

seq1  TCTTCTCTTTTCTTCTACCTTGTTTCTACTTTCTTGCTTGTCTTGGTATT  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTCTTTTCTTCTACCTTGTTTCTACTTTCTTGCTTGTCTTGGTATT  1131

seq1  TCTAATAAGAGCATCAAGCTCATTTGACAAGTTTGTTCAGAATTC  1193
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAATAAGAGCATCAAGCTCATTTGACAAGTTTGTTCAGAATTC  1176

seq1: chr12_90050655_90050971
seq2: B6Ng01-132O02.g_75_391

seq1  ACTTGTGTTTGCTTTATCTCTACCCAGGGGTGGGGTGCTTGAAGAGGAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGTGTTTGCTTTATCTCTACCCAGGGGTGGGGTGCTTGAAGAGGAAG  50

seq1  CAAAATGTTTTATTAAGGAAGTAAAGGCTGAGCCTGGGCTGCCGGCTCGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATGTTTTATTAAGGAAGTAAAGGCTGAGCCTGGGCTGCCGGCTCGC  100

seq1  TGGCTCACTTCCCTCCTCCCATGTCTGACTCTCTGGGGCTGAGAGTGGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTCACTTCCCTCCTCCCATGTCTGACTCTCTGGGGCTGAGAGTGGGG  150

seq1  GCTGTGCCCATGTTGCAAATGCTTGCTCTGCAGCACAGTTTTCCAGGAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGCCCATGTTGCAAATGCTTGCTCTGCAGCACAGTTTTCCAGGAAT  200

seq1  TTCAGGACACAGGAATTTTCACCCAGCTGTGTTGCGTGTTGCTGTTCAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGGACACAGGAATTTTCACCCAGCTGTGTTGCGTGTTGCTGTTCAGC  250

seq1  AGTCTGAAGTTGCTTATCCAGCGTAAGTCAGAATGGGGAGCCTAGGGAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGAAGTTGCTTATCCAGCGTAAGTCAGAATGGGGAGCCTAGGGAGG  300

seq1  AGGTGGGGCGGGGGGGG  317
      |||||||||||||||||
seq2  AGGTGGGGCGGGGGGGG  317