BAC Information

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BAC

Clone NameB6Ng01-134P18
Chromosome12 (Build37)
Map Location 115,225,214 - 115,328,186
singlet/doubletdoublet
Overlap geneIgh, Ighv14-2, Ighv4-2, Ighv3-2, Ighv11-2, Ighv14-3, EG629812, Ighv6-2
Upstream geneBrf1, Pacs2, Tex22, Mta1, Crip2, Crip1, 4930427A07Rik, LOC676349, Tmem121, Igh-2, Gm900, Igh-1b, Igh-3, Ighg1, AI324046, LOC668370, LOC668375, EG382645, Igh-5, Igh-6, Ighj4, Ighj3, Ighj2, Ighj1, Ighd4-1, Ighd3-2, Ighd5-6, Ighd2-8, Ighd5-5, Ighd2-7, Ighd5-8, Ighd5-4, Ighd2-6, Ighd5-7, Ighd5-3, Ighd2-5, Ighd5-2, Ighd2-4, Ighd6-2, Ighd2-3, Ighd6-1, Ighd1-1, 4930523C11Rik, Ighd3-1, Ighd5-1, Adam6, Ighv5-1, Ighv2-1, Ighv5-2, Ighv2-2, Ighv5-3, Ighv5-4, Ighv6-1, Ighv2-3, Ighv5-5, Ighv5-6, Ankrd12-like, Ighv5-7, EG668389, Ighv5-8, Ighv5-9, Ighv5-10, Ighv2-5, Ighv5-11, Ighv5-12, Ighv2-6, Ighv5-9-1, EG628098, Ighv2-9-1, Ighv5-13, Ighv2-6-8, EG629785, Ighv2-7, LOC668405, Ighv5-15, Ighv5-16, Ighv5-17, Ighv5-18, Ighv2-8, Ighv2-9, Ighv5-19, Ighv7-1, Ighv7-2, Ighv14-1, Ighv4-1, Ighv3-1, Ighv11-1
Downstream geneIghv9-1, Ighv12-1, EG629818, Ighv12-2, Ighv9-3, Ighv7-3, Ighv15-1, Ighv14-4, EG668438, Ighv7-4, EG629833, EG633457, Ighv13-1, Ighv3-6, EG636260, Ighv3-7, Ighv5-21, Ighv3-8, Ighv8-1, Ighv1-1, Ighv13-2, EG435321, Ighv6-3, EG628398, EG639510, Ighv6-6, EG432701, EG629849, Ighv1-2, Ighv10-1, Ighv1-3, Ighv1-4, Ighv10-2, EG668469, EG380809, Ighv1-6, EG668474, Ighv10-4, Ighv1-8, Ighv15-2, Ighv1-9, Ighv1-10, Ighv1-11, EG629860, Ighv1-13, Ighv1-14, Ighv1-15, EG629866, Ighv1-17-1, Ighv1-17, Ighv1-18, EG668493, Ighv1-19, EG668497, Ighv1-21-1, Ighv1-21, Ighv1-22, Ighv1-23, Ighv1-24, Ighv1-25, Ighv1-26, Ighv1-27, Ighv1-28, Ighv1-29, Ighv1-30, Ighv1-31, Ighv1-32, Ighv1-33, Ighv1-34, EG668515, Ighv1-36, Ighv1-37, Ighv1-38, Ighv1-39, Ighv1-40, Ighv1-41, EG629906, EG629908, Ighv1-44, Ighv1-45, Ighv1-46, Ighv1-47, Ighv8-3, EG629919, Ighv1-48, Ighv1-49, EG640506
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-134P18.bB6Ng01-134P18.g
ACCDH935147DH935148
length1,1681,080
definitionDH935147|Mus musculus domesticus DNA, BAC clone: B6Ng01-134P18, 5' end.DH935148|Mus musculus domesticus DNA, BAC clone: B6Ng01-134P18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(115,327,019 - 115,328,186)(115,225,214 - 115,226,300)
sequence
gaattcactgtctataaatcattaacaagacaaattctttaccctgacta
ttactcacctcaaggtttctacttgcttgtcagtctatagcagcaggata
cacaaatagggctagactatgactattaaatccagtttaacactgaccct
gtagctctggcagaagagtccaaatttagattcccatgttcccattctgt
gattatcactggcagtagttattattaggaggatcagtgcacatctcttt
gagtacctagaccagaattatatgtatttataggtgtataatatgagttg
cagcttatggagtcttggggaagcttgttaaagctccagggttctgtaag
acattcttgtgcagccgctggattcactttcagagaatactatatcagat
gggtcctgtagattttagaaaaagatcttgagtccttgatttaattacaa
acacagctggggggtgattacagagtatgcttcctatgtgagaagggcac
ttcccatttcaagagatcatacaaaaaataaaatttcatgcctccaaata
aacagattggagacttcttttttccctgagaagaaatggagaaggcaact
ggggagggatcaataagggcttgagtaggagcagagaagggattgagata
taatgtgagtaaaaaattaaataagggagaaaatgagatacagactatac
tatccaacttctgaacaacagggaaactgatgtcatttcattctgagcct
ggagtcaaacttccatgaaggattctcaggaacattgtgtggtttctcag
ttcagacagggttcttggtcaaccaaaaaccaaatataagcataatagac
atggttttagcttctctgggctgcttctccatctgaaattttcctttgga
tcatttccacatttaagttgtaggatcctatgttatcttgaaagattata
ttcttggatgtaagttatacataataataagatgagtaaatttgctggtg
agtgcagaaataactgtccaggagcatcagatgccaaagagctcatgaaa
ctgatgttagacctttccattatgaactcaagacaatagcctaaggtgta
ttcctctggaaagacatgtttcctgaattcgagagataccaagagggaag
gtgggtcaagttcattgt
gaattcatttctttatgaatagcaaatattaacacttaacttcttttact
atacccaaccttactttgtctgagattccgaaataatcaacttttataag
cttagaaaacgcacaactctaattgaagttattttctcttccatgctcct
gattaatgaatgcatatgtatttgttttatgataatcacttgctaaaaag
aaaaaaataggattaaaaaaccttatgaaacaaataccaaaaattgttga
aaataccatatgggtattggttgataaataatgtgtttgtagtatttttt
attacttgggtcagttggatgagtaaaaaggaatcacccttttaaaacta
agctaacgatacctataaagtatttttccagggtatttactatgttgtcc
aatgcatacagagtaaagttctttgttaaggggaatacacatacacagag
atagcagagggggtgagggagagaaagagacaagagaccaaatacgtgca
agatactaattggaaaaaaagacacagggagaatgaaatagagaattcaa
atctgaacttgccctttttaaaatgatataaagtgacttctcattttgac
tctaaattgctttcactgtggggaattcacccatttctgaagtttctgta
cctgcacagaaggaacaaaagttatgtaaatgaattggagtcaaagagta
atgaagataaccctatccactcttgattattaccaagaaatgtccttggc
gtccagagcatgggactcattcaggatcttgcacaaaagttaatgattaa
tgacctggttaatgagagcagttttactaaatcattgactactctgggtt
cagggttgaactagccatacagccttaataagagaaagaaattacgagaa
atctgtctttctattgaatcttttacatctagtctacatgattcactgac
gaattttaatgcattatgtgaaccacatcattcaaatacttttttataga
tattttctttatttatatttcaaatgctatcccttccctgatcgcctctt
gaaatccctacctaacacttttcccttccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_115327019_115328186
seq2: B6Ng01-134P18.b_49_1216 (reverse)

seq1  ACAATGACCCTGACCACACC-TCCCTCTTGGTACTCTCT-GAATCCAGAA  48
      ||||||| | ||||| |||| |||||||||||| ||||| |||| ||| |
seq2  ACAATGAACTTGACC-CACCTTCCCTCTTGGTA-TCTCTCGAATTCAGGA  48

seq1  CAC-TGTCCTTTCAGA-GAATACCACTTAGGCTA-TGTCCTGAGTTTCAT  95
       || |||| || |||| ||||||  ||||||||| |||| |||| |||||
seq2  AACATGTCTTTCCAGAGGAATACACCTTAGGCTATTGTCTTGAG-TTCAT  97

seq1  AATGGAAAGGTCT-ACATCAGTTTCATGAGCTCTTTTGGCATCTGATGCT  144
      ||||||||||||| ||||||||||||||||||| ||||||||||||||||
seq2  AATGGAAAGGTCTAACATCAGTTTCATGAGCTC-TTTGGCATCTGATGCT  146

seq1  CCTGGACAGTTATTTCTGCACTCACCAGCAAATTTACTCATCTTATTATT  194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGACAGTTATTTCTGCACTCACCAGCAAATTTACTCATCTTATTATT  196

seq1  ATGTAATAACTTACATCCAAGAATATAATCTTTCAAGATAACATAGGATC  244
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGT-ATAACTTACATCCAAGAATATAATCTTTCAAGATAACATAGGATC  245

seq1  CTACAACCTTAAATGTGGAAATGATCCAAAGGAAAATTTCAGATGGAGAA  294
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAA-CTTAAATGTGGAAATGATCCAAAGGAAAATTTCAGATGGAGAA  294

seq1  GCAGCCCAGAGAAGCTAAAACCATGTCTATTATGCTTATATTTGGTTTTT  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCCCAGAGAAGCTAAAACCATGTCTATTATGCTTATATTTGGTTTTT  344

seq1  GGTTGACCAAGAACCCTGTCTGAACTGAGAAACCACACAATGTTCCTGAG  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGACCAAGAACCCTGTCTGAACTGAGAAACCACACAATGTTCCTGAG  394

seq1  AATCCTTCATGGAAGTTTGACTCCAGGCTCAGAATGAAATGACATCAGTT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCTTCATGGAAGTTTGACTCCAGGCTCAGAATGAAATGACATCAGTT  444

seq1  TCCCTGTTGTTCAGAAGTTGGATAGTATAGTCTGTATCTCATTTTCTCCC  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGTTGTTCAGAAGTTGGATAGTATAGTCTGTATCTCATTTTCTCCC  494

seq1  TTATTTAATTTTTTACTCACATTATATCTCAATCCCTTCTCTGCTCCTAC  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTAATTTTTTACTCACATTATATCTCAATCCCTTCTCTGCTCCTAC  544

seq1  TCAAGCCCTTATTGATCCCTCCCCAGTTGCCTTCTCCATTTCTTCTCAGG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGCCCTTATTGATCCCTCCCCAGTTGCCTTCTCCATTTCTTCTCAGG  594

seq1  GAAAAAAGAAGTCTCCAATCTGTTTATTTGGAGGCATGAAATTTTATTTT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAAGAAGTCTCCAATCTGTTTATTTGGAGGCATGAAATTTTATTTT  644

seq1  TTGTATGATCTCTTGAAATGGGAAGTGCCCTTCTCACATAGGAAGCATAC  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATGATCTCTTGAAATGGGAAGTGCCCTTCTCACATAGGAAGCATAC  694

seq1  TCTGTAATCACCCCCCAGCTGTGTTTGTAATTAAATCAAGGACTCAAGAT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTAATCACCCCCCAGCTGTGTTTGTAATTAAATCAAGGACTCAAGAT  744

seq1  CTTTTTCTAAAATCTACAGGACCCATCTGATATAGTATTCTCTGAAAGTG  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTCTAAAATCTACAGGACCCATCTGATATAGTATTCTCTGAAAGTG  794

seq1  AATCCAGCGGCTGCACAAGAATGTCTTACAGAACCCTGGAGCTTTAACAA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCAGCGGCTGCACAAGAATGTCTTACAGAACCCTGGAGCTTTAACAA  844

seq1  GCTTCCCCAAGACTCCATAAGCTGCAACTCATATTATACACCTATAAATA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCCCCAAGACTCCATAAGCTGCAACTCATATTATACACCTATAAATA  894

seq1  CATATAATTCTGGTCTAGGTACTCAAAGAGATGTGCACTGATCCTCCTAA  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATAATTCTGGTCTAGGTACTCAAAGAGATGTGCACTGATCCTCCTAA  944

seq1  TAATAACTACTGCCAGTGATAATCACAGAATGGGAACATGGGAATCTAAA  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAACTACTGCCAGTGATAATCACAGAATGGGAACATGGGAATCTAAA  994

seq1  TTTGGACTCTTCTGCCAGAGCTACAGGGTCAGTGTTAAACTGGATTTAAT  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGACTCTTCTGCCAGAGCTACAGGGTCAGTGTTAAACTGGATTTAAT  1044

seq1  AGTCATAGTCTAGCCCTATTTGTGTATCCTGCTGCTATAGACTGACAAGC  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATAGTCTAGCCCTATTTGTGTATCCTGCTGCTATAGACTGACAAGC  1094

seq1  AAGTAGAAACCTTGAGGTGAGTAATAGTCAGGGTAAAGAATTTGTCTTGT  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAGAAACCTTGAGGTGAGTAATAGTCAGGGTAAAGAATTTGTCTTGT  1144

seq1  TAATGATTTATAGACAGTGAATTC  1168
      ||||||||||||||||||||||||
seq2  TAATGATTTATAGACAGTGAATTC  1168

seq1: chr12_115225214_115226300
seq2: B6Ng01-134P18.g_69_1148

seq1  GAATTCATTTCTTTATGAATAGCAAATATTAACACTTAACTTCTTTTACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTCTTTATGAATAGCAAATATTAACACTTAACTTCTTTTACT  50

seq1  ATACCCAACCTTACTTTGTCTGAGATTCCGAAATAATCAACTTTTATAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCCAACCTTACTTTGTCTGAGATTCCGAAATAATCAACTTTTATAAG  100

seq1  CTTAGAAAACGCACAACTCTAATTGAAGTTATTTTCTCTTCCATGCTCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGAAAACGCACAACTCTAATTGAAGTTATTTTCTCTTCCATGCTCCT  150

seq1  GATTAATGAATGCATATGTATTTGTTTTATGATAATCACTTGCTAAAAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAATGAATGCATATGTATTTGTTTTATGATAATCACTTGCTAAAAAG  200

seq1  AAAAAAATAGGATTAAAAAACCTTATGAAACAAATACCAAAAATTGTTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAATAGGATTAAAAAACCTTATGAAACAAATACCAAAAATTGTTGA  250

seq1  AAATACCATATGGGTATTGGTTGATAAATAATGTGTTTGTAGTATTTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACCATATGGGTATTGGTTGATAAATAATGTGTTTGTAGTATTTTTT  300

seq1  ATTACTTGGGTCAGTTGGATGAGTAAAAAGGAATCACCCTTTTAAAACTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACTTGGGTCAGTTGGATGAGTAAAAAGGAATCACCCTTTTAAAACTA  350

seq1  AGCTAACGATACCTATAAAGTATTTTTCCAGGGTATTTACTATGTTGTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAACGATACCTATAAAGTATTTTTCCAGGGTATTTACTATGTTGTCC  400

seq1  AATGCATACAGAGTAAAGTTCTTTGTTAAGGGGAATACACATACACAGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCATACAGAGTAAAGTTCTTTGTTAAGGGGAATACACATACACAGAG  450

seq1  ATAGCAGAGGGGGTGAGGGAGAGAAAGAGACAAGAGACCAAATACGTGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCAGAGGGGGTGAGGGAGAGAAAGAGACAAGAGACCAAATACGTGCA  500

seq1  AGATACTAATTGGAAAAAAAGACACAGGGAGAATGAAATAGAGAATTCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATACTAATTGGAAAAAAAGACACAGGGAGAATGAAATAGAGAATTCAA  550

seq1  ATCTGAACTTGCCCTTTTTAAAATGATATAAAGTGACTTCTCATTTTGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGAACTTGCCCTTTTTAAAATGATATAAAGTGACTTCTCATTTTGAC  600

seq1  TCTAAATTGCTTTCACTGTGGGGAATTCACCCATTTCTGAAGTTTCTGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAATTGCTTTCACTGTGGGGAATTCACCCATTTCTGAAGTTTCTGTA  650

seq1  CCTGCACAGAAGGAACAAAAGTTATGTAAATGAATTGGAGTCAAAGAGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCACAGAAGGAACAAAAGTTATGTAAATGAATTGGAGTCAAAGAGTA  700

seq1  ATGAAGATAACCCTATCCACTCTTGATTATTACCAAGAAATGTCCTTGGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGATAACCCTATCCACTCTTGATTATTACCAAGAAATGTCCTTGGC  750

seq1  GTCCAGAGCATGGGACTCATTCAGGATCTTGCACAAAAGTTAATGATTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAGAGCATGGGACTCATTCAGGATCTTGCACAAAAGTTAATGATTAA  800

seq1  TGACCTGGTTAATGAGAGCAGTTTTACTAAATCATTGACTACTCTGGGTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTGGTTAATGAGAGCAGTTTTACTAAATCATTGACTACTCTGGGTT  850

seq1  CA-GGTTGAACTAGCCATACAGCCTTAATAAGAGAAAGAAATTACGAGAA  899
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGTTGAACTAGCCATACAGCCTTAATAAGAGAAAGAAATTACGAGAA  900

seq1  ATCTGTCTTTCTATTGAATCTTTTACATCTAGTCTACATGATTCACTGAC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTCTTTCTATTGAATCTTTTACATCTAGTCTACATGATTCACTGAC  950

seq1  GAATTTTAATGCATTATGTGAACCACATTCATTCAAATACTTTTTTATTA  999
      ||||||||||||||||||||||||||| ||||||||||||||||||| ||
seq2  GAATTTTAATGCATTATGTGAACCACA-TCATTCAAATACTTTTTTA-TA  998

seq1  GATATTTTCTTTATTTATATTTCAAATGCTATCCCCTTTCCTGATTCGCC  1049
      |||||||||||||||||||||||||||||||| ||||| ||||| ||| |
seq2  GATATTTTCTTTATTTATATTTCAAATGCTAT-CCCTTCCCTGA-TCG-C  1045

seq1  CTCTGAAAATCCCCTACCCTTACACCTTTTCCCCTCCC  1087
      ||||  |||| ||||| ||| ||| |||||||| ||||
seq2  CTCTTGAAAT-CCCTA-CCTAACA-CTTTTCCCTTCCC  1080