BAC Information

Click to search

BAC

Clone NameB6Ng01-135B19
Chromosome12 (Build37)
Map Location 29,628,145 - 29,628,658
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC669327, 1110015M06Rik, Allc, Colec11, Rps7, Rnaseh1, Adi1, Ttc15, Tssc1
Downstream gene4833405L11Rik, LOC629608, Myt1l, LOC100043496, Pxdn
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-135B19.bB6Ng01-135B19.g
ACCDH935236DH935237
length5071,234
definitionDH935236|Mus musculus domesticus DNA, BAC clone: B6Ng01-135B19, 5' end.DH935237|Mus musculus domesticus DNA, BAC clone: B6Ng01-135B19, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
caggacaaggaagcaggagtgggtaggttagtgagcagggggaggggatg
ggggtgtttcagacgggaaatgaggaaaggggataaaatttgaaatgtaa
ataaagaaaatacataataaaaaaaaaccaagaaaatggtacaaaggatg
tacatactgggaaaggagaataatgaagataacatggttatcttcagagg
aaattttaaggaatttgcaaacaaacctcccagagctaataaactgcagg
atatatgagcaatgtagaaaaatcaagcaatctgcatgtgcaaataagca
cataaaataaaaactgcagatacattagtgtaaacaaatcaaactaatca
aaattgttatgtatttcaaattacaattctatcttatagagttaactatc
aagatttgtgataaaatgaaataattatattaattatatactatatgccc
aacaaaacatatacaagatctaaatactgaaaaagttcagaacattaaca
aataaaa
gaattcatttgttgaattaaacaatgtttggaagagattattttgtgatg
aaaaatcatcaaagagcttggcataaaaagaaaaccaaatagaaatattg
gaacaaatgaattcaacaaataaaatagaaaatctagttgagaacctcaa
gatcagaataaatcaaactaaagaaaatatgtactaactagaagacaaat
ctctgaaaataacccactgttggggctggcctgcggctctcatgtctggg
ttcgagcctggaggcaacctggagctgaaacaaaagagggaaactaggca
gacaagagagagagagatggaaccaagacaggattctgatcaaggctcaa
atttttaatggtggacatgctttataaaggagggggaagcccattcccgc
caaatcatccttggagcccagctgcaggtaaccatgtataggctccagaa
tagctaggcagactcccagcaggtagcagcagctgcagtggctgaacaat
agagtgatctagggaggcaggctccaccctaggtgatctccttagtggga
tagcaaggtcaaggtctgtctccgcctgctttcaggcttgtgggaagcta
caacccaccaagaatcaaaggagtcagaaggaatttaaaaagaatgaagt
ctacacatgtcttacagaaaggaacaagaagtataaaaagaggtagagat
aaaaagggtacaagagtattcatttccaataaaagcctttgaatgtaaac
agttaattctccgattgaaaaaaacataggctagctgaacatattttaaa
aaataaggtccaatgaccatactgcctagaagaaactagtttccacagca
aagacacacaggacctgaaagtgaagagacagaagaaggccatctacaca
aaaagaatcaactgtgatcaggaatcttcagcacctagtcttgtcatgac
agttaaaaaagtgagggagggtagcatctaatgatgaaggtatcaattca
tcaaagaaaatagttagattgatatgtgtgccatgctggagcgctcgatt
ataggaggaagggtaggcccagacaacattcatgcctcttctggatcagt
caatcgtctgatgcagctagcaaaagaactcctagcgaagttcaacaagc
tcgtaaatgtgtgggtacagtctctaaattaactatgaacatggaccaag
ctaacacaccaagatatttattcataatcatgcg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_29628145_29628658
seq2: B6Ng01-135B19.b_43_555

seq1  GAATTCCAGGACAAGGAAGCAGGAGTGGGTAGGTTAGTGAGCAGGGGGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGACAAGGAAGCAGGAGTGGGTAGGTTAGTGAGCAGGGGGAG  50

seq1  GGGATGGGGGTGTTTCAGAGGGGAAATGAGGAAAGGGGATAAAATTTGAA  100
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GGGATGGGGGTGTTTCAGACGGGAAATGAGGAAAGGGGATAAAATTTGAA  100

seq1  ATGTAAATAAAGAAAATACATAATAAAAAAAAACCAAGAAAATGGTACAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAAATAAAGAAAATACATAATAAAAAAAAACCAAGAAAATGGTACAA  150

seq1  AGGATGTACATACTGGGAAAGGAGAATAATGAAGATAACATGGTTATCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATGTACATACTGGGAAAGGAGAATAATGAAGATAACATGGTTATCTT  200

seq1  CAGAGGAAATTTTAAGGAATTTGCAAACAAACCTCCCAGAGCTAATAAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGAAATTTTAAGGAATTTGCAAACAAACCTCCCAGAGCTAATAAAC  250

seq1  TGCAGGATATATGAGCAATGTAGAAAAATCAAGCAATCTGCATGTGCAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGGATATATGAGCAATGTAGAAAAATCAAGCAATCTGCATGTGCAAA  300

seq1  TAAGCACATAAAATAAAAACTGCAGATACATTAGTGTAAACAAATCAAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCACATAAAATAAAAACTGCAGATACATTAGTGTAAACAAATCAAAC  350

seq1  TAATCAAAATTGTTATGTATTTCAAATTACAATTCTATCTTAGAGAGTTA  400
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TAATCAAAATTGTTATGTATTTCAAATTACAATTCTATCTTATAGAGTTA  400

seq1  ACTATCAAGAAAATATGATAAAATGAAATAATTATATTAATTATATACTA  450
      ||||||||| |  | |||||||||||||||||||||||||||||||||||
seq2  ACTATCAAG-ATTTGTGATAAAATGAAATAATTATATTAATTATATACTA  449

seq1  TATGCCCAACAAAACATATACAAGATCTAAATACTGAAAAAGTTCAGAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCCCAACAAAACATATACAAGATCTAAATACTGAAAAAGTTCAGAAC  499

seq1  ATTAACAAATAAAA  514
      ||||||||||||||
seq2  ATTAACAAATAAAA  513