BAC Information

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BAC

Clone NameB6Ng01-136A21
Chromosome12 (Build37)
Map Location 7,438,355 - 7,588,124
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100042118, LOC668380
Downstream geneEG668388, Apob, 1110057K04Rik, Gdf7, Hs1bp3, BC106175, Rhob, Slc7a15
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-136A21.bB6Ng01-136A21.g
ACCDH935938DH935939
length1,0531,156
definitionDH935938|Mus musculus domesticus DNA, BAC clone: B6Ng01-136A21, 5' end.DH935939|Mus musculus domesticus DNA, BAC clone: B6Ng01-136A21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(7,438,355 - 7,439,415)(7,586,951 - 7,588,124)
sequence
gaattcacatattaacatataaacaaggttatctgctctttacaatattt
aaagttccttccagggcccttatcttcccttccctccctcttttcttccc
ccctctcccttctgtccctcctcctctttcattctcctccccatcctccc
tcaccatctctcctttctttctttttattttcttaccattttgacatcaa
attaagttcatttcctgcacaacatagaaactcttaaactctctacagag
agttttctaaacccatagaagcattctgttcaatcccgtggactgtccta
gtggggcagtctgctgcttgcattgcttaacttctgctcgtcacatctcg
agtgattgtggggtcctctcagcctctggactatgatgtcctggggtaga
cactgtgaagccactctttcctctgtaagtaatcccagcagggtgtgagc
ttcaaaccagatgcgtgactgtttggagcaattaaatcatactttatccc
agtctccatttgcttcttccttgggatgcatagcctacattctttgggcc
attagacttctctttttttattagatattttcttcatttacatttcaaat
gctatcctgaaagtcccctatacgctcccactcacaccgcaccctgctcc
ccaacccacccactcccacttcatggccctggtattcccctgaattgggg
catataatcttcgcaagaccaaggggcctctcttctcaatgatggccgac
tgactaggccatcttctgctacatatgcagcaagagtcacaagctctggg
ggtattggttagttcatattgttgtttctcctatagggtttcagcccctt
tcagcccctggggtactttctctagctcctctattggagccctgtgttcc
atccatagatgactgtgagcatccacttgtggcatagccaggcacttggc
atagcctcccagaggcagctatatcagggtcctttcatggaaatcttgct
ggcgtatgcatactgtttgggtttggtgctttttatgggaggatcctggg
tgg

gaattcttcaggaagtcaaaaggaaaagaaagatgaaaatggcatctctg
ataagagacagaggaagataaaggatgacatttacatgtcataggatatc
tagagagtccaaatgtagagaacagaaataagaagagaaaatatgatgaa
ggacaacagctgagaaaggatccaggctttgaaatcatgaatgaacactg
tttcagataaatgccataaataccaaaagaaagctggcatggactcagtc
ctgtggagttttctaattgcagaatacaaagaattgtagcacatgttcag
gaatgtggaggggcactgagtatgctatgtatgcctatggactccaagga
cacaggcttgtgttctaagctctacaaagtaaacatttttgggagtcggg
taagctaattaacttgcatgaatctcagtttatccaaatctagaatgaaa
ttagcaactgctattttataaggatttttctgatgattagcacataatta
acttgtggttgatgaatgaccatcacttaataaacaaaaccaaactccag
caaatggaatcacactaataagaagcagaaaaagcaaagccaagataatt
gctttaaatcatttgcaatatttaccaattactttatcctttgtctttga
agtagactttacctagaattaaataaattttaaaaagaacatagtgtaat
gtaaaaattgaataatactatttctatttcttagttgtccccaaaagcat
aaatatataatctaaatatttgacatgaaaaaggatgagatgcaaagaaa
taatagttgaatcactaaatagaaaatataacaaagtagtgaatactata
aagaaaaagtacttaaaaatcaacaaaaggaatagagaagaaaactcaag
gaaagcctcagagcacctaaaccagtgatttttatatatatatttcttta
tttatatttcaaatgtatccccttctgggttcccttcaaaacaccctatc
ccttcacccctcgcctgctcacacccaccacactgcttcccggaactggc
attcactacactggtgcaagggctcttctttcatgaatgtctggaactag
tcatctctgctaaattaaagcctgagcatggtcaccatcaatggttactc
tttggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_7438355_7439415
seq2: B6Ng01-136A21.b_45_1097

seq1  GAATTCACATATTAACATATAAACAAGGTTATCTGCTCTTTACAATATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACATATTAACATATAAACAAGGTTATCTGCTCTTTACAATATTT  50

seq1  AAAGTTCCTTCCAGGGCCCTTATCTTCCCTTCCCTCCCTCTTTTCTTCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTCCTTCCAGGGCCCTTATCTTCCCTTCCCTCCCTCTTTTCTTCCC  100

seq1  CCCTCTCCCTTCTGTCCCTCCTCCTCTTTCATTCTCCTCCCCATCCTCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCTCCCTTCTGTCCCTCCTCCTCTTTCATTCTCCTCCCCATCCTCCC  150

seq1  TCACCATCTCTCCTTTCTTTCTTTTTATTTTCTTACCATTTTGACATCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCATCTCTCCTTTCTTTCTTTTTATTTTCTTACCATTTTGACATCAA  200

seq1  ATTAAGTTCATTTCCTGCACAACATAGAAACTCTTAAACTCTCTACAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGTTCATTTCCTGCACAACATAGAAACTCTTAAACTCTCTACAGAG  250

seq1  AGTTTTCTAAACCCATAGAAGCATTCTGTTCAATCCCGTGGACTGTCCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTCTAAACCCATAGAAGCATTCTGTTCAATCCCGTGGACTGTCCTA  300

seq1  GTGGGGCAGTCTGCTGCTTGCATTGCTTAACTTCTGCTCGTCACATCTCG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGGCAGTCTGCTGCTTGCATTGCTTAACTTCTGCTCGTCACATCTCG  350

seq1  AGTGATTGTGGGGTCCTCTCAGCCTCTGGACTATGATGTCCTGGGGTAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGATTGTGGGGTCCTCTCAGCCTCTGGACTATGATGTCCTGGGGTAGA  400

seq1  CACTGTGAAGCCACTCTTTCCTCTGTAAGTAATCCCAGCAGGGTGTGAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTGAAGCCACTCTTTCCTCTGTAAGTAATCCCAGCAGGGTGTGAGC  450

seq1  TTCAAACCAGATGCGTGACTGTTTGGAGCAATTAAATCATACTTTATCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAACCAGATGCGTGACTGTTTGGAGCAATTAAATCATACTTTATCCC  500

seq1  AGTCTCCATTTGCTTCTTCCTTGGGATGCATAGCCTACATTCTTTGGGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTCCATTTGCTTCTTCCTTGGGATGCATAGCCTACATTCTTTGGGCC  550

seq1  ATTAGACTTCTCTTTTTTTATTAGATATTTTCTTCATTTACATTTCAAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGACTTCTCTTTTTTTATTAGATATTTTCTTCATTTACATTTCAAAT  600

seq1  GCTATCCTGAAAGTCCCCTATACGCTCCCACTCACACCGCACCCTGCTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATCCTGAAAGTCCCCTATACGCTCCCACTCACACCGCACCCTGCTCC  650

seq1  CCAACCCACCCACTCCCACTTCATGGCCCTGGTATTCCCCTGAATTGGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACCCACCCACTCCCACTTCATGGCCCTGGTATTCCCCTGAATTGGGG  700

seq1  CATATAATCTTCGCAAGACCAAGGGGCCTCTCTTCTCAATGATGGCCGAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATAATCTTCGCAAGACCAAGGGGCCTCTCTTCTCAATGATGGCCGAC  750

seq1  TGACTAGGCCATCTTCTGCTACATATGCAGCAAGAGTCACAAGCTCTGGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTAGGCCATCTTCTGCTACATATGCAGCAAGAGTCACAAGCTCTGGG  800

seq1  GGTATTGGTTAGTTCATATTGTTGTTTCTCCTATAGGGTTTCAGCCCCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATTGGTTAGTTCATATTGTTGTTTCTCCTATAGGGTTTCAGCCCCTT  850

seq1  TCAGCCCCTGGGGTACTTTCTCTAGCTCCTCTATTGGGAGCCCTGTGTTC  900
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TCAGCCCCTGGGGTACTTTCTCTAGCTCCTCTATT-GGAGCCCTGTGTTC  899

seq1  CATCCAATAGATGACTGTGAGCATCCACTTGTGGCATAGCCAGGCACTTG  950
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCC-ATAGATGACTGTGAGCATCCACTTGTGGCATAGCCAGGCACTTG  948

seq1  GCATAGCCTCCCAAGAGGCAGCTATATCAGGGTCCTTTCATGGAAAATCT  1000
      |||||||||||| |||||||||||||||||||||||||||||| ||||||
seq2  GCATAGCCTCCC-AGAGGCAGCTATATCAGGGTCCTTTCATGG-AAATCT  996

seq1  TGCTGGCGTATGCAATACTGTTTGGGTTTGGTGGCTTTTTATGGGAAGGA  1050
      ||||||||||||| |||||||||||||||||| |||||||||||| ||||
seq2  TGCTGGCGTATGC-ATACTGTTTGGGTTTGGT-GCTTTTTATGGG-AGGA  1043

seq1  TCCCTGGGTGG  1061
      | |||||||||
seq2  T-CCTGGGTGG  1053


seq1: chr12_7586951_7588124
seq2: B6Ng01-136A21.g_67_1222 (reverse)

seq1  ACCAAAGAGTACACA-TGATGGTGGGACTCATGGCTCCAGCTCTATATGT  49
      |||||||||||  || |||||||  ||| ||| ||||  ||| || || |
seq2  ACCAAAGAGTAACCATTGATGGT--GAC-CAT-GCTCAGGCTTTA-ATTT  45

seq1  AGCAGAGATGACCTAGT--CAGACATCAATGGAAGGAGAGGCCCTTGCAC  97
      ||||||||||| |||||  |||||||  ||| ||| ||| ||||||||||
seq2  AGCAGAGATGA-CTAGTTCCAGACATTCATGAAAGAAGA-GCCCTTGCAC  93

seq1  CAGTGTAGGTGAATGCCAGTTCCGGGAAGCAGGTGTGGGTGGGTTGGTGA  147
      ||||||| ||||||||||||||||||||||| |||| |||||||  ||||
seq2  CAGTGTA-GTGAATGCCAGTTCCGGGAAGCA-GTGT-GGTGGGT--GTGA  138

seq1  GCAGGGCGAGGGGTGAGGGGATAGGGGTGTTTTTGGAGGGGAACCCAGGA  197
      ||| |||||||||||| |||||| |||||||||  || ||||||||||  
seq2  GCA-GGCGAGGGGTGAAGGGATA-GGGTGTTTT--GAAGGGAACCCAG--  182

seq1  AAGGGGATAACATTTGAAATATAAATAAAGAAAATATATAATATAAAAAT  247
      |||||||| ||||||||||||||||||||| |||||||| ||||||||||
seq2  AAGGGGAT-ACATTTGAAATATAAATAAAG-AAATATAT-ATATAAAAAT  229

seq1  CACTGGTTTAGGTGCTCTGAGGCTTTCCTTGAGTTTTCTTCTCTATTCCT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGTTTAGGTGCTCTGAGGCTTTCCTTGAGTTTTCTTCTCTATTCCT  279

seq1  TTTGTTGATTTTTAAGTACTTTTTCTTTATAGTATTCACTACTTTGTTAT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTGATTTTTAAGTACTTTTTCTTTATAGTATTCACTACTTTGTTAT  329

seq1  ATTTTCTATTTAGTGATTCAACTATTATTTCTTTGCATCTCATCCTTTTT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCTATTTAGTGATTCAACTATTATTTCTTTGCATCTCATCCTTTTT  379

seq1  CATGTCAAATATTTAGATTATATATTTATGCTTTTGGGGACAACTAAGAA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTCAAATATTTAGATTATATATTTATGCTTTTGGGGACAACTAAGAA  429

seq1  ATAGAAATAGTATTATTCAATTTTTACATTACACTATGTTCTTTTTAAAA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAAATAGTATTATTCAATTTTTACATTACACTATGTTCTTTTTAAAA  479

seq1  TTTATTTAATTCTAGGTAAAGTCTACTTCAAAGACAAAGGATAAAGTAAT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTAATTCTAGGTAAAGTCTACTTCAAAGACAAAGGATAAAGTAAT  529

seq1  TGGTAAATATTGCAAATGATTTAAAGCAATTATCTTGGCTTTGCTTTTTC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAAATATTGCAAATGATTTAAAGCAATTATCTTGGCTTTGCTTTTTC  579

seq1  TGCTTCTTATTAGTGTGATTCCATTTGCTGGAGTTTGGTTTTGTTTATTA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCTTATTAGTGTGATTCCATTTGCTGGAGTTTGGTTTTGTTTATTA  629

seq1  AGTGATGGTCATTCATCAACCACAAGTTAATTATGTGCTAATCATCAGAA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGATGGTCATTCATCAACCACAAGTTAATTATGTGCTAATCATCAGAA  679

seq1  AAATCCTTATAAAATAGCAGTTGCTAATTTCATTCTAGATTTGGATAAAC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCTTATAAAATAGCAGTTGCTAATTTCATTCTAGATTTGGATAAAC  729

seq1  TGAGATTCATGCAAGTTAATTAGCTTACCCGACTCCCAAAAATGTTTACT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATTCATGCAAGTTAATTAGCTTACCCGACTCCCAAAAATGTTTACT  779

seq1  TTGTAGAGCTTAGAACACAAGCCTGTGTCCTTGGAGTCCATAGGCATACA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAGAGCTTAGAACACAAGCCTGTGTCCTTGGAGTCCATAGGCATACA  829

seq1  TAGCATACTCAGTGCCCCTCCACATTCCTGAACATGTGCTACAATTCTTT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCATACTCAGTGCCCCTCCACATTCCTGAACATGTGCTACAATTCTTT  879

seq1  GTATTCTGCAATTAGAAAACTCCACAGGACTGAGTCCATGCCAGCTTTCT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTCTGCAATTAGAAAACTCCACAGGACTGAGTCCATGCCAGCTTTCT  929

seq1  TTTGGTATTTATGGCATTTATCTGAAACAGTGTTCATTCATGATTTCAAA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTATTTATGGCATTTATCTGAAACAGTGTTCATTCATGATTTCAAA  979

seq1  GCCTGGATCCTTTCTCAGCTGTTGTCCTTCATCATATTTTCTCTTCTTAT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGGATCCTTTCTCAGCTGTTGTCCTTCATCATATTTTCTCTTCTTAT  1029

seq1  TTCTGTTCTCTACATTTGGACTCTCTAGATATCCTATGACATGTAAATGT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTTCTCTACATTTGGACTCTCTAGATATCCTATGACATGTAAATGT  1079

seq1  CATCCTTTATCTTCCTCTGTCTCTTATCAGAGATGCCATTTTCATCTTTC  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTTTATCTTCCTCTGTCTCTTATCAGAGATGCCATTTTCATCTTTC  1129

seq1  TTTTCCTTTTGACTTCCTGAAGAATTC  1174
      |||||||||||||||||||||||||||
seq2  TTTTCCTTTTGACTTCCTGAAGAATTC  1156


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