BAC Information

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BAC

Clone NameB6Ng01-136F17
Chromosome12 (Build37)
Map Location 12,709,563 - 12,851,295
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC628327, LOC627110, LOC100043209, D12Ertd553e
Downstream geneLOC100043215, Mycn, EG668473, LOC628449, Ddx1, LOC627199, LOC627189, LOC100043243, LOC100042396, LOC238091, EG633789, LOC668481
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-136F17.bB6Ng01-136F17.g
ACCDH936148DH936149
length4561,144
definitionDH936148|Mus musculus domesticus DNA, BAC clone: B6Ng01-136F17, 5' end.DH936149|Mus musculus domesticus DNA, BAC clone: B6Ng01-136F17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(12,850,835 - 12,851,295)(12,709,563 - 12,710,706)
sequence
gaattcactatgtggaccaagctagccttgagctcagagatctgcccctc
tccgtctcccagtgctaggataaagggatgtgccaccatgctccacttga
agcaaacttctaaaactagccacagcacagcaggcacagagattcaaaca
taagcctatgtataagagggtttgctgctagggaagggctcaggatcaat
tggctcctatttgggggttcttagccaccagaaagctggagtctgagcta
tgtttttccttgttgctgagagaatttcactgattgctagccctagctgt
aatgtgcccggttttaaattggcccgtttggttaaaagtatggcctagta
ggcaagccttcattttgtgagcaaatgctagattagtcccaagaaggagc
agctccactactggcctgtgccggaccaaggagaagatccccttcggaaa
atcagg
tgacaagcaatcaactgctaagctgtcttcctacctgctcttctcccttc
aaccatataagcccgggaaagtccagaggctgcaggaagggaatggcttg
acccaagaaataaggaacacatttcagtggaaccctgaaatggttcacct
ccccagaacatctatctagccagggaagcagtagccatttgggcaatggc
tctgaccaggtcccagtggtacaggaaccctctgttggagctcgaaggac
cagtgtggtctagggatgtcagagtctctgccaagggtgttataaaggag
atggacttctgttgttacagtttaaatggataaagtttgtgtcaaagatt
tttatatttgtaataatagagcgtattattaattattattaatccagttg
ggcattctgggatcctggggttgctaaagagcacaaagtctgacttccaa
gtaaatcacaattatggcctaaactatatggaaaatggcaaccctccctc
tgcctattttgaaggctaaatccaatattctctctctctctctctctctc
tctctctcatacacacacacacatgcacacacgcacatgtacatactcac
cccaccatgacaacattccaggttggtaaagcatatcctagccccacaga
cagtggccctggtctcatgatttgactgacttgcacaacatgtacagaaa
tgatttgcccacatttgatagagctatatcacgtaatttcctcgtttggt
ctattttctttcatctccttggcttcaagatcaatgtaatggattgttct
tttaaagccagaatgagaaagttctgggatcagagtctcagctgacttgg
taacctgcaggaaaaaaaatgtaaatattttgtcatatttgtcttcctaa
ctcactaaaactctgggtggtggtcattagcataacccacaaggctgaca
ccaagctgatacgcttgcaatgtatcagggaatgtacttcgagaaatgga
gctgctatgaaagtggaatgagggtcggttgcattgggcactgcatagcc
tgggaataagtctgctacttctgccttcgagcatacggccctataagaac
tatgacactctctaattgcctctcctggctgtaggccaatctaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_12850835_12851295
seq2: B6Ng01-136F17.b_46_501 (reverse)

seq1  CCTGATTTCTTCCGAAGGGGATCATTCTCCTTGGTGCCGGCACAGGCCAG  50
      |||||||  |||||||||||||| ||||||||||| ||||||||||||||
seq2  CCTGATT--TTCCGAAGGGGATC-TTCTCCTTGGT-CCGGCACAGGCCAG  46

seq1  TAGTGGAGCTGTCTCCTTCTTGGGACTAATCTAGCATTTGCTCACAAAAT  100
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TAGTGGAGCTG-CTCCTTCTTGGGACTAATCTAGCATTTGCTCACAAAAT  95

seq1  GAAGGCTTGCCTACTAGGCCATACTTTTAACCAAACGGGCCAATTTAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGCTTGCCTACTAGGCCATACTTTTAACCAAACGGGCCAATTTAAAA  145

seq1  CCGGGCACATTACAGCTAGGGCTAGCAATCAGTGAAATTCTCTCAGCAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGGCACATTACAGCTAGGGCTAGCAATCAGTGAAATTCTCTCAGCAAC  195

seq1  AAGGAAAAACATAGCTCAGACTCCAGCTTTCTGGTGGCTAAGAACCCCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAAAACATAGCTCAGACTCCAGCTTTCTGGTGGCTAAGAACCCCCA  245

seq1  AATAGGAGCCAATTGATCCTGAGCCCTTCCCTAGCAGCAAACCCTCTTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGGAGCCAATTGATCCTGAGCCCTTCCCTAGCAGCAAACCCTCTTAT  295

seq1  ACATAGGCTTATGTTTGAATCTCTGTGCCTGCTGTGCTGTGGCTAGTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGGCTTATGTTTGAATCTCTGTGCCTGCTGTGCTGTGGCTAGTTTT  345

seq1  AGAAGTTTGCTTCAAGTGGAGCATGGTGGCACATCCCTTTATCCTAGCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTTTGCTTCAAGTGGAGCATGGTGGCACATCCCTTTATCCTAGCAC  395

seq1  TGGGAGACGGAGAGGGGCAGATCTCTGAGCTCAAGGCTAGCTTGGTCCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGACGGAGAGGGGCAGATCTCTGAGCTCAAGGCTAGCTTGGTCCAC  445

seq1  ATAGTGAATTC  461
      |||||||||||
seq2  ATAGTGAATTC  456

seq1: chr12_12709563_12710706
seq2: B6Ng01-136F17.g_76_1219

seq1  TGACAAGCAATCAACTGCTAAGCTGTCTTCCTACCTGCTCTTCTCCCTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAAGCAATCAACTGCTAAGCTGTCTTCCTACCTGCTCTTCTCCCTTC  50

seq1  AACCATATAAGCCCGGGAAAGTCCAGAGGCTGCAGGAAGGGAATGGCTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATATAAGCCCGGGAAAGTCCAGAGGCTGCAGGAAGGGAATGGCTTG  100

seq1  ACCCAAGAAATAAGGAACACATTTCAGTGGAACCCTGAAATGGTTCACCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAAGAAATAAGGAACACATTTCAGTGGAACCCTGAAATGGTTCACCT  150

seq1  CCCCAGAACATCTATCTAGCCAGGGAAGCAGTAGCCATTTGGGCAATGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAGAACATCTATCTAGCCAGGGAAGCAGTAGCCATTTGGGCAATGGC  200

seq1  TCTGACCAGGTCCCAGTGGTACAGGAACCCTCTGTTGGAGCTCGAAGGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACCAGGTCCCAGTGGTACAGGAACCCTCTGTTGGAGCTCGAAGGAC  250

seq1  CAGTGTGGTCTAGGGATGTCAGAGTCTCTGCCAAGGGTGTTATAAAGGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTGGTCTAGGGATGTCAGAGTCTCTGCCAAGGGTGTTATAAAGGAG  300

seq1  ATGGACTTCTGTTGTTACAGTTTAAATGGATAAAGTTTGTGTCAAAGATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGACTTCTGTTGTTACAGTTTAAATGGATAAAGTTTGTGTCAAAGATT  350

seq1  TTTATATTTGTAATAATAGAGCGTATTATTAATTATTATTAATCCAGTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATATTTGTAATAATAGAGCGTATTATTAATTATTATTAATCCAGTTG  400

seq1  GGCATTCTGGGATCCTGGGGTTGCTAAAGAGCACAAAGTCTGACTTCCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATTCTGGGATCCTGGGGTTGCTAAAGAGCACAAAGTCTGACTTCCAA  450

seq1  GTAAATCACAATTATGGCCTAAACTATATGGAAAATGGCAACCCTCCCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAATCACAATTATGGCCTAAACTATATGGAAAATGGCAACCCTCCCTC  500

seq1  TGCCTATTTTGAAGGCTAAATCCAATATTCTCTCTCTCTCTCTCTCTCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTATTTTGAAGGCTAAATCCAATATTCTCTCTCTCTCTCTCTCTCTC  550

seq1  TCTCTCTCATACACACACACACATGCACACACGCACATGTACATACTCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCATACACACACACACATGCACACACGCACATGTACATACTCAC  600

seq1  CCCACCATGACAACATTCCAGGTTGGTAAAGCATATCCTAGCCCCACAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCATGACAACATTCCAGGTTGGTAAAGCATATCCTAGCCCCACAGA  650

seq1  CAGTGGCCCTGGTCTCATGATTTGACTGACTTGCACAACATGTACAGAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGCCCTGGTCTCATGATTTGACTGACTTGCACAACATGTACAGAAA  700

seq1  TGATTTGCCCACATTTGATAGAGCTATATCACGTAATTTCCTCGTTTGGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTGCCCACATTTGATAGAGCTATATCACGTAATTTCCTCGTTTGGT  750

seq1  CTATTTTCTTTCATCTCCTTGGCTTCAAGATCAATGTAATGGATTGTTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTTCTTTCATCTCCTTGGCTTCAAGATCAATGTAATGGATTGTTCT  800

seq1  TTTAAGGCCAGAATGAGAAAGTTCT-GGATCAGAGTCTCAGCTGACTTGG  849
      ||||| ||||||||||||||||||| ||||||||||||||||||||||||
seq2  TTTAAAGCCAGAATGAGAAAGTTCTGGGATCAGAGTCTCAGCTGACTTGG  850

seq1  TAACCTGCAGGAAAAAAAAATGTAAATA-TTTGTCATATTTGTCTTCCTA  898
      ||||||||||| |||||||||||||||| |||||||||||||||||||||
seq2  TAACCTGCAGG-AAAAAAAATGTAAATATTTTGTCATATTTGTCTTCCTA  899

seq1  ACTCACTAAAACTCT-GGTGATGTTCATTAGCATAACCCAGCAAAGGCTG  947
      ||||||||||||||| |||| || ||||||||||||||||   |||||||
seq2  ACTCACTAAAACTCTGGGTGGTGGTCATTAGCATAACCCA--CAAGGCTG  947

seq1  ACACCAAGCTGATACAGCTTGCAATGTATCAGGAAATGTACTTCGAGGAA  997
      ||||||||||||||| ||||||||||||||||| |||||||||||| |||
seq2  ACACCAAGCTGATAC-GCTTGCAATGTATCAGGGAATGTACTTCGA-GAA  995

seq1  ATGGAGCTGCTATGAAAGT-GAATGAGGGTCGGTTGCATT-GGCACTGCT  1045
      ||||||||||||||||||| |||||||||||||||||||| |||||||| 
seq2  ATGGAGCTGCTATGAAAGTGGAATGAGGGTCGGTTGCATTGGGCACTGCA  1045

seq1  AAGCCTGGGAAT-AGTCTGCCTACTTCTGCCTTCTGCCATACCGTCCTTA  1094
       ||||||||||| |||||| ||||||||||||||   |||| || || ||
seq2  TAGCCTGGGAATAAGTCTG-CTACTTCTGCCTTCGAGCATA-CGGCCCTA  1093

seq1  TAGAACCTATG-CACTCTCTCATTGCCTTCTCCT-GCTGTAGGCCAATCT  1142
      ||  | ||||| |||||||| |||||| |||||| |||||||||||||||
seq2  TAAGAACTATGACACTCTCTAATTGCC-TCTCCTGGCTGTAGGCCAATCT  1142

seq1  AA  1144
      ||
seq2  AA  1144