BAC Information

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BAC

Clone NameB6Ng01-136L15
Chromosome12 (Build37)
Map Location 65,056,060 - 65,199,826
singlet/doubletdoublet
Overlap geneLOC435302
Upstream geneEG382606
Downstream geneEG623046, LOC623123, LOC217645, LOC217647, Gm527, Klhl28, A430041B07Rik, Prpf39, Fkbp3, Fancm
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-136L15.bB6Ng01-136L15.g
ACCDH936424DH936425
length1,1601,107
definitionDH936424|Mus musculus domesticus DNA, BAC clone: B6Ng01-136L15, 5' end.DH936425|Mus musculus domesticus DNA, BAC clone: B6Ng01-136L15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(65,198,655 - 65,199,826)(65,056,060 - 65,057,187)
sequence
gaattctgcctgaggtctaatgggctttattttaagcctgctcttcttat
atgaggagtttacatgccaggcttgagattttgaaagctaaccatcatgg
tgtgtacataaaatcctgagtcgtttctacatctgttatctgcttgaaaa
atctgacccgaaggcacaaagcctttgaattacagaccatatggaacatc
tggaaatttcccatttccatttgtgttggcccataactaaagccccatct
cttccctagttcattactccagtagctaatgattagtgctacatcaggtc
tgtttcaattcgcctttctggctcagtagttcttcatgccttttatctcc
tgctgtcttgaactctgcctcacttgctcctctccatttcatgtcctata
atgagaagccaccctctgcacatcattttgcttcagttaagtatctggga
aagccagactaacaggactttagccctctagttagatgactgctcatcat
agacagcacatcacaaacagcaccagtgatgtttctattcacaaggctca
tgctgatgtcagggactatggacattttcacctggaatatatggtacttc
ctgcctaattctatggagatttaacagctaaatgctacacagaattttta
tctcacatatttgaattccacaataaggactggttactttatataatgtt
tccgtactactcgtaaatcttagcaagaggttaaagaaaggggatatggc
agtaagtggctttggagagcttctttcaaacttctgtgactctctacaat
tctctaaggaaagattaaagactctgaaagcttgtgccaagtctctttgc
tcttcacagcagttatatatctgcttttcttttgtaacaggggtccaaaa
tggaggccctatatactagacaagagctgtgtccctgagatacacaccag
aaatccagttagtatgagcattttgcgtagaagcatgtttcagagatgag
tcagtgatacactaaaaggagctgagaggtcattggaagttagagtgctg
aaaatttttcctcctcaggatataagcactgacaactttggtctgatggc
atatgcagaaatcaatttgtatatactgtggttactgaagtttaccctca
ctccaatctc
gaattcaaacatttgtgtatattatgtatttagagaagttcaaattaaaa
tttaaacatgattatgtattttaagccacttattgaaaaccaaatactca
ctgtgcattttttatcctttggaataaatatgcacacatatttatcacat
atatttatatatgggttatttattcagatatatacacatggcagatttta
catttaggataaaaataagaatgacatcattgaatcaaaatagcaacatg
cataggtctttgtatgtttcttcaaatattttgcagtgtattgaaagagc
tgttttaacaactcaagtatgtaatattttgtaaatgcttatggattctc
attatgaggaaaatatgctgtttaacaaataatagggcattatgatcaaa
gctacatttccacattacatgaatctggccattttgtactgactcattat
cccagtggcaggcatatttttaggtgcagcttcattccatctaacctgaa
ttctttgattagtccattttgtgatagcccagagcctcaactgtagttta
tgtcattaatcttccatttatgaatagacattagaactacaaattgttta
tattttttcttagaatgaaaacctcttctaattggtcagtacaagttgct
tgaaattttatcatgtaataatgctttgatcatctgataataaagtctca
gtctcccacataagccttttgatgttattttgctttttctctttctctag
ggcatactatatattctatgcttagtatattttgctatagacattactct
aagcaccttcataaaaatttaatgccatttttacatttctgaaatgttta
cactgatataaaatgtataatcttacgtattttttgaagctaatactttt
cagttatacataagggggtggatctagtcatattcatacatctttcatgg
atcatcattttaattctagaatatttcctttggatgactcatgtacttat
tatatatgattggtactgagatgtttagtgcttttctgtatttctacatg
atttgtagcatgggttttctaggcccttacaggttatcacctagtatgta
caaggtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_65198655_65199826
seq2: B6Ng01-136L15.b_49_1208 (reverse)

seq1  GAGATTGGGAGTGAGGGTAAAACTTCAGTA--CACAGTTATATACAAATG  48
      |||||| ||||||||||| |||||||||||  ||||| ||||||||||| 
seq2  GAGATT-GGAGTGAGGGT-AAACTTCAGTAACCACAG-TATATACAAATT  47

seq1  GATTTCTGCATATGCCATTCAGACCAAAGTTTTGTCAGTGC-TATATCCC  97
      ||||||||||||||||| |||||||||||  |||||||||| ||||| ||
seq2  GATTTCTGCATATGCCA-TCAGACCAAAG--TTGTCAGTGCTTATAT-CC  93

seq1  TGAGGGGGAAAATGTCTCAGCAACTCCTAACTTCCAATGACTTCTTCAGC  147
      ||||| ||||||  | ||||| ||| ||||||||||||||| || |||| 
seq2  TGAGGAGGAAAAATTTTCAGC-ACT-CTAACTTCCAATGACCTC-TCAG-  139

seq1  CTCCTTTTAGTGTATCACTGACTCATCTCTGAAACATTGCTTTCTACGCA  197
      |||||||||||||||||||||||||||||||||||| ||| |||||||||
seq2  CTCCTTTTAGTGTATCACTGACTCATCTCTGAAACA-TGC-TTCTACGCA  187

seq1  AAATGCTCATACTAACTGGATTTCTTGGTTGTGTATCTCAGGGACACAGC  247
      |||||||||||||||||||||||||  | |||||||||||||||||||||
seq2  AAATGCTCATACTAACTGGATTTCT--GGTGTGTATCTCAGGGACACAGC  235

seq1  TCTTGTCTAGTATATAGGGCCTCCATTTTGGACCCCTGTTACAAAAGAAA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTCTAGTATATAGGGCCTCCATTTTGGACCCCTGTTACAAAAGAAA  285

seq1  AGCAGATATATAACTGCTGTGAAGAGCAAAGAGACTTGGCACAAGCTTTC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGATATATAACTGCTGTGAAGAGCAAAGAGACTTGGCACAAGCTTTC  335

seq1  AGAGTCTTTAATCTTTCCTTAGAGAATTGTAGAGAGTCACAGAAGTTTGA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTCTTTAATCTTTCCTTAGAGAATTGTAGAGAGTCACAGAAGTTTGA  385

seq1  AAGAAGCTCTCCAAAGCCACTTACTGCCATATCCCCTTTCTTTAACCTCT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGCTCTCCAAAGCCACTTACTGCCATATCCCCTTTCTTTAACCTCT  435

seq1  TGCTAAGATTTACGAGTAGTACGGAAACATTATATAAAGTAACCAGTCCT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAAGATTTACGAGTAGTACGGAAACATTATATAAAGTAACCAGTCCT  485

seq1  TATTGTGGAATTCAAATATGTGAGATAAAAATTCTGTGTAGCATTTAGCT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTGGAATTCAAATATGTGAGATAAAAATTCTGTGTAGCATTTAGCT  535

seq1  GTTAAATCTCCATAGAATTAGGCAGGAAGTACCATATATTCCAGGTGAAA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAATCTCCATAGAATTAGGCAGGAAGTACCATATATTCCAGGTGAAA  585

seq1  ATGTCCATAGTCCCTGACATCAGCATGAGCCTTGTGAATAGAAACATCAC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCCATAGTCCCTGACATCAGCATGAGCCTTGTGAATAGAAACATCAC  635

seq1  TGGTGCTGTTTGTGATGTGCTGTCTATGATGAGCAGTCATCTAACTAGAG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGCTGTTTGTGATGTGCTGTCTATGATGAGCAGTCATCTAACTAGAG  685

seq1  GGCTAAAGTCCTGTTAGTCTGGCTTTCCCAGATACTTAACTGAAGCAAAA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTAAAGTCCTGTTAGTCTGGCTTTCCCAGATACTTAACTGAAGCAAAA  735

seq1  TGATGTGCAGAGGGTGGCTTCTCATTATAGGACATGAAATGGAGAGGAGC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTGCAGAGGGTGGCTTCTCATTATAGGACATGAAATGGAGAGGAGC  785

seq1  AAGTGAGGCAGAGTTCAAGACAGCAGGAGATAAAAGGCATGAAGAACTAC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGAGGCAGAGTTCAAGACAGCAGGAGATAAAAGGCATGAAGAACTAC  835

seq1  TGAGCCAGAAAGGCGAATTGAAACAGACCTGATGTAGCACTAATCATTAG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCCAGAAAGGCGAATTGAAACAGACCTGATGTAGCACTAATCATTAG  885

seq1  CTACTGGAGTAATGAACTAGGGAAGAGATGGGGCTTTAGTTATGGGCCAA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTGGAGTAATGAACTAGGGAAGAGATGGGGCTTTAGTTATGGGCCAA  935

seq1  CACAAATGGAAATGGGAAATTTCCAGATGTTCCATATGGTCTGTAATTCA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAATGGAAATGGGAAATTTCCAGATGTTCCATATGGTCTGTAATTCA  985

seq1  AAGGCTTTGTGCCTTCGGGTCAGATTTTTCAAGCAGATAACAGATGTAGA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTTTGTGCCTTCGGGTCAGATTTTTCAAGCAGATAACAGATGTAGA  1035

seq1  AACGACTCAGGATTTTATGTACACACCATGATGGTTAGCTTTCAAAATCT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGACTCAGGATTTTATGTACACACCATGATGGTTAGCTTTCAAAATCT  1085

seq1  CAAGCCTGGCATGTAAACTCCTCATATAAGAAGAGCAGGCTTAAAATAAA  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCCTGGCATGTAAACTCCTCATATAAGAAGAGCAGGCTTAAAATAAA  1135

seq1  GCCCATTAGACCTCAGGCAGAATTC  1172
      |||||||||||||||||||||||||
seq2  GCCCATTAGACCTCAGGCAGAATTC  1160

seq1: chr12_65056060_65057187
seq2: B6Ng01-136L15.g_67_1173

seq1  GAATTCAAACATTTGTGTATATTATGTATTTAGAGAAGTTCAAATTAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAACATTTGTGTATATTATGTATTTAGAGAAGTTCAAATTAAAA  50

seq1  TTTAAACATGATTATGTATTTTAAGCCACTTATTGAAAACCAAATACTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAACATGATTATGTATTTTAAGCCACTTATTGAAAACCAAATACTCA  100

seq1  CTGTGCATTTTTTATCCTTTGGAATAAATATGCACACATATTTATCACAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGCATTTTTTATCCTTTGGAATAAATATGCACACATATTTATCACAT  150

seq1  ATATTTATATATGGGTTATTTATTCAGATATATACACATGGCAGATTTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTATATATGGGTTATTTATTCAGATATATACACATGGCAGATTTTA  200

seq1  CATTTAGGATAAAAATAAGAATGACATCATTGAATCAAAATAGCAACATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTAGGATAAAAATAAGAATGACATCATTGAATCAAAATAGCAACATG  250

seq1  CATAGGTCTTTGTATGTTTCTTCAAATATTTTGCAGTGTATTGAAAGAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGGTCTTTGTATGTTTCTTCAAATATTTTGCAGTGTATTGAAAGAGC  300

seq1  TGTTTTAACAACTCAAGTATGTAATATTTTGTAAATGCTTATGGATTCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTAACAACTCAAGTATGTAATATTTTGTAAATGCTTATGGATTCTC  350

seq1  ATTATGAGGAAAATATGCTGTTTAACAAATAATAGGGCATTATGATCAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATGAGGAAAATATGCTGTTTAACAAATAATAGGGCATTATGATCAAA  400

seq1  GCTACATTTCCACATTACATGAATCTGGCCATTTTGTACTGACTCATTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACATTTCCACATTACATGAATCTGGCCATTTTGTACTGACTCATTAT  450

seq1  CCCAGTGGCAGGCATATTTTTAGGTGCAGCTTCATTCCATCTAACCTGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTGGCAGGCATATTTTTAGGTGCAGCTTCATTCCATCTAACCTGAA  500

seq1  TTCTTTGATTAGTCCATTTTGTGATAGCCCAGAGCCTCAACTGTAGTTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTGATTAGTCCATTTTGTGATAGCCCAGAGCCTCAACTGTAGTTTA  550

seq1  TGTCATTAATCTTCCATTTATGAATAGACATTAGAACTACAAATTGTTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATTAATCTTCCATTTATGAATAGACATTAGAACTACAAATTGTTTA  600

seq1  TATTTTTTCTTAGAATGAAAACCTCTTCTAATTGGTCAGTACAAGTTGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTTCTTAGAATGAAAACCTCTTCTAATTGGTCAGTACAAGTTGCT  650

seq1  TGAAATTTTATCATGTAATAATGCTTTGATCATCTGATAATAAAGTCTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATTTTATCATGTAATAATGCTTTGATCATCTGATAATAAAGTCTCA  700

seq1  GTCTCCCACATAAGCCTTTTGATGTTATTTTGCTTTTTCTCTTTCTCTAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCCCACATAAGCCTTTTGATGTTATTTTGCTTTTTCTCTTTCTCTAG  750

seq1  GGCATACTATATATTCTATGCTTAGTATATTTTGCTATAGACATTACTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATACTATATATTCTATGCTTAGTATATTTTGCTATAGACATTACTCT  800

seq1  AAGCACCTTCATAAAAATTTAATGCCATTTTTACATTTCTGAAATGTTTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCACCTTCATAAAAATTTAATGCCATTTTTACATTTCTGAAATGTTTA  850

seq1  CACTGATATAAAATGTATAATCTTACGTATTTTTTGAAGCTAATACTTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGATATAAAATGTATAATCTTACGTATTTTTTGAAGCTAATACTTTT  900

seq1  CAGTTAATACAATAAGGGGTGGATCTAGTCATATTCATACATCTTTCATG  950
      ||||| |||||  | |||||||||||||||||||||||||||||||||||
seq2  CAGTT-ATACATAAGGGGGTGGATCTAGTCATATTCATACATCTTTCATG  949

seq1  GATCAATCATTTTTAATTCTAGAATATTTCCTTTGGAATGAACTCAATGT  1000
      |||| |||| |||||||||||||||||||||||||| ||| |||| ||||
seq2  GATC-ATCA-TTTTAATTCTAGAATATTTCCTTTGG-ATG-ACTC-ATGT  994

seq1  TACCTTTAATTTATTAT-TATGATTGGTACTGAGGATGTTTAGTTGCTTT  1049
              | ||||||| ||||||||||||||| ||||||||| ||||||
seq2  --------ACTTATTATATATGATTGGTACTGA-GATGTTTAG-TGCTTT  1034

seq1  TCTGTATTTCTAACATGATTTGTAGCATGTGTTTTCTAGGCCCTTTACAA  1099
      ||||||||||| ||||||||||||||||| ||||||||||||| ||||| 
seq2  TCTGTATTTCT-ACATGATTTGTAGCATGGGTTTTCTAGGCCC-TTACAG  1082

seq1  GTCTAAATCACCTAGTAATGTACCAGGTT  1128
      ||    |||||||||| |||||| |||||
seq2  GT---TATCACCTAGT-ATGTACAAGGTT  1107