BAC Information

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BAC

Clone NameB6Ng01-138F15
Chromosome12 (Build37)
Map Location 91,669,720 - 91,670,694
singlet/doubletsinglet
Overlap genenone
Upstream geneNrxn3, LOC100039498
Downstream geneLOC100039287, Dio2, LOC100039295, 4930544I03Rik, 4930534B04Rik, 5430427M07Rik, Tshr
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-138F15.bB6Ng01-138F15.g
ACCDH937636DH937637
length9701,122
definitionDH937636|Mus musculus domesticus DNA, BAC clone: B6Ng01-138F15, 5' end.DH937637|Mus musculus domesticus DNA, BAC clone: B6Ng01-138F15, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcctaactgacaagaaaagctgggcctgtgaacccactagttgt
ctccattcccaaatggagacctctacatgcaaaaataaataaataaataa
ataaataaataaataaataaataaataaataaataaataacagctaaata
aacactctttgcttttgtatactatttaagtctgggatatcatattttgg
caattcttggaccctaacagtataagctttttatattagtccgttttcca
ttactgtaatagaaaacccaatgccatatattcattagaagaaacattta
tttagctcacaattgtatgtacaggattatagctcaagcaacaacaatgt
gttggttctggttatgtttgttctgaccagggtacctctgatgatatcac
ctcatgaaaaatggaatcacaagtgaaggaggtcatgaaggaagaaaaat
taccatcataagattaggagtcacctatggacttggtctcttataatagc
aatctctttttatgaaccctaactgaggggccctctaatcccttaaagat
taatacttgaagatcctaaaccttccctttgtattccacttcttgaaggt
tttgtcacctcccaatatcacggtattgatgacaagcttacaactaatga
accattggaaggccttctcgagccaaattcaacacaaagcaatgtatctc
tctttaatcactattaatgggggttctttgtgccttgtactgtatgaatc
cctgagaatattaacaagttgattgagactaaaccttatcttataataag
gctacaataaatattatcttttaatttatgctcttaattttcattaatgt
atgggggggtgatacttctgtatattcttaatattcattatgtgttgagt
acctgctaaggacaagaacaaagcatgatccatgcatggtggtgcatgcc
tttattccagcactcgggag
gaattccattggctcatgccctaagatcaacaattgataaattagacccc
atgaaactggaaagcttctataaggcaaaatacatattcaataagaccaa
tcggcaacctatagattgggaaaaaaaaaaaaagcaaaacaaaaaacttc
attaagcccatagctgatagaaagctaatatccaaaatataaagaactca
agaacctaccaccaaagaacaaaaacaaaaacaaaaatttaaaaatgtga
tataaaactaaactgagaattcacaacagaagaatcttgaatggctgaga
aacacctaaaaaaatgttcaaagtccttagtgatcagaaaaatgcaaatc
aaaacgatcctgagattctaccttataccaatcagaatggctaagatcaa
aacctcaggcaacagcacatgttggtgaagatgtggagaaagaggaacac
tactccactgctggtaggattgcaaactggtacaaccactctgaaaatca
atctagagcttcctcagaaaattggaaatagatctacctgaagacccagt
aataccagtcttgggaatatacccaaaaggtgccccactatgccacatgg
gcacatattccactacgttcatagcagccttatttataatagccagaagc
aggaaacaacccaaatgtccttcaacggaggaatggatacagaaaatgtc
gtacatttacacaatggagtactactcagctattaaaaacaatgaattcc
tgaaattcctaggcaaatggatggaactagaaaataacatcatgtgtgag
gtaactcagacccaaaaggacatgcatggtatatattcactaacatgtag
atattagctaaacaacaacaaatacagaatacccaagatatagtccacag
agctcacaaaggtcaacagctgaattgctcaagtgaggatacctcagtct
acttgggaggagaagaagcaatcacaaacggagggtctgggagatggaga
tggaggagagggaacatgtctgtattcggtgagaacaagactacaccctt
acttcaaaaacgtttaatagacgacctacgtacgtcagaataggaaacta
ctcgagagtattgctagtgtac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_91669720_91670694
seq2: B6Ng01-138F15.b_47_1016

seq1  GAATTCTCCTAACTGACAAGAAAAGCTGGGCCTGTGAACCCACTAGTTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTAACTGACAAGAAAAGCTGGGCCTGTGAACCCACTAGTTGT  50

seq1  CTCCATTCCCAAATGGAGACCTCTACATGCAAAAATAAATAAATAAATAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATTCCCAAATGGAGACCTCTACATGCAAAAATAAATAAATAAATAA  100

seq1  ATAAATAAATAAATAAATAAATAAATAAATAAATAAATAACAGCTAAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATAAATAAATAAATAAATAAATAAATAAATAAATAACAGCTAAATA  150

seq1  AACACTCTTTGCTTTTGTATACTATTTAAGTCTGGGATATCATATTTTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACTCTTTGCTTTTGTATACTATTTAAGTCTGGGATATCATATTTTGG  200

seq1  CAATTCTTGGACCCTAACAGTATAAGCTTTTTATATTAGTCCGTTTTCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTCTTGGACCCTAACAGTATAAGCTTTTTATATTAGTCCGTTTTCCA  250

seq1  TTACTGTAATAGAAAACCCAATGCCATATATTCATTAGAAGAAACATTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGTAATAGAAAACCCAATGCCATATATTCATTAGAAGAAACATTTA  300

seq1  TTTAGCTCACAATTGTATGTACAGGATTATAGCTCAAGCAACAACAATGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGCTCACAATTGTATGTACAGGATTATAGCTCAAGCAACAACAATGT  350

seq1  GTTGGTTCTGGTTATGTTTGTTCTGACCAGGGTACCTCTGATGATATCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGTTCTGGTTATGTTTGTTCTGACCAGGGTACCTCTGATGATATCAC  400

seq1  CTCATGAAAAATGGAATCACAAGTGAAGGAGGTCATGAAGGAAGAAAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGAAAAATGGAATCACAAGTGAAGGAGGTCATGAAGGAAGAAAAAT  450

seq1  TACCATCATAAGATTAGGAGTCACCTATGGACTTGGTCTCTTATAATAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCATCATAAGATTAGGAGTCACCTATGGACTTGGTCTCTTATAATAGC  500

seq1  AATCTCTTTTTATGAACCCTAACTGAGGGGCCCTCTAATCCCTTAAAGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTCTTTTTATGAACCCTAACTGAGGGGCCCTCTAATCCCTTAAAGAT  550

seq1  TAATACTTGAAGATCCTAAACCTTCCCTTTGTATTCCACTTCTTGAAGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATACTTGAAGATCCTAAACCTTCCCTTTGTATTCCACTTCTTGAAGGT  600

seq1  TTTGTCACCTCCCAATATCACGGTATTGATGACAAGCTTACAACTAATGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCACCTCCCAATATCACGGTATTGATGACAAGCTTACAACTAATGA  650

seq1  ACCATTGGAAGGCCTTCTCGAGCCAAATTCAACACAAAGCAATGTATCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATTGGAAGGCCTTCTCGAGCCAAATTCAACACAAAGCAATGTATCTC  700

seq1  TCTTTAATCACTATTAATTGGGGTTCTTTGTGCCTTGTAACTGTATGAAT  750
      |||||||||||||||||| ||||||||||||||||||| |||||||||||
seq2  TCTTTAATCACTATTAATGGGGGTTCTTTGTGCCTTGT-ACTGTATGAAT  749

seq1  CCCTGAGAATATTAACAAGTTGATTGAGACTAAACCTTATCTTATAATAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGAGAATATTAACAAGTTGATTGAGACTAAACCTTATCTTATAATAA  799

seq1  GGCTACAATAAATATTATCTTTTATTTTATGCTCTTAATTTTCATTATTG  850
      |||||||||||||||||||||||| |||||||||||||||||||||| ||
seq2  GGCTACAATAAATATTATCTTTTAATTTATGCTCTTAATTTTCATTAATG  849

seq1  TATGTGGTGGTGATACTTCTGTATATTCTTAATATTTCATTATGTGTTGA  900
      |||| || |||||||||||||||||||||||||| |||||||||||||||
seq2  TATGGGGGGGTGATACTTCTGTATATTCTTAATA-TTCATTATGTGTTGA  898

seq1  GTACCTGCTAAGGACAAGAACAAAAGCAAGAATCCAGGCATGGTGGTGCA  950
      ||||||||||||||||||||| |||||| | ||||| |||||||||||||
seq2  GTACCTGCTAAGGACAAGAAC-AAAGCATG-ATCCATGCATGGTGGTGCA  946

seq1  TGCCTTTAATTCCAGCACTCGGGAG  975
      ||||||| |||||||||||||||||
seq2  TGCCTTT-ATTCCAGCACTCGGGAG  970