BAC Information

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BAC

Clone NameB6Ng01-139D01
Chromosome8 (Build37)12 (Build37)
Map Location 51,862,137 - 51,862,17369,389,669 - 69,390,810
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC100039919, EG667495, LOC100039954, LOC100039966
Downstream geneLOC667517
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-139D01.bB6Ng01-139D01.g
ACCDH938240DH938241
length1441,134
definitionDH938240|Mus musculus domesticus DNA, BAC clone: B6Ng01-139D01, 5' end.DH938241|Mus musculus domesticus DNA, BAC clone: B6Ng01-139D01, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(51,862,137 - 51,862,173)(69,389,669 - 69,390,810)
sequence
atggctctagctgcatatgtagcagaggatggcctagttggtcatcaatg
ggaggagaggcccttggttctgtgaaggttctatgccccagtataaggga
atgctagggccaagaagcaggagtgggtgggttggggagcaggg
gaattcacttatcttagaaggagtctaatggggagaatgaataaggcaaa
gtgtatttcctcaaagaacaagatgatatgactgaataagtttcaaaaga
ggattatgttttccaagaaatccaggggttcttaagtttgaaggtccaaa
atttttattttgttttttaaatcttaaaacaaatgaattgtactctacct
cacaagaagtaagaaaatgttactctatagagatgaaatagaatggagtg
ttttgtatattaaagtaataaacatttaaagatccagaccaattggctgg
ttaataatgggcaccggcaaatcagttcgttgtcttgaatgctttttttt
cttgttttctaaatgacaggactgtttccactctatgcaaacacattgtt
tttaaccttgtaaaaccaatagcttctaatttctccagcttctttctccc
tttctgttttaatggagttctttcagtctcttatgtggacaactctttct
ctcattccaccatccagactgcaaagctcaggccatgatgggccatgttt
ctatagtcatattggggtcattgatgaactgcaagtattacataagggcc
agtaattccaaggtctatctatagaggggactacttcccaccatccttgg
catatatatacatttatatgggaatgttctactttgtctctaaggtatat
tcactttaagagaccaaagatacctttttaggtttttctccatcttgctg
ctttttcatcttattttgaattttctgtgctaagaaagactcagttttcc
tggcaacgaagttggaatttgggaagtcattttcaacctcctacatctta
ctccagtggatcatcatgtacctgatggatataaatcttaataaatgacc
tgtccgctactcttatttataaatcatcttattgtacctcaagagctggg
tttgagaaatatgcctgctgcacacattctgcagtgctacaatgtctaag
aactatcatgactgctgtctgttctagactacaagtctttatttactcaa
tagaatcatcctcaatggcggctccctattaactaggatatatattatat
cacagaaaggggagtttactttatacgggtagtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_51862137_51862173
seq2: B6Ng01-139D01.b_157_193 (reverse)

seq1  CCCTGCTCACCAACCCACCCACTCCTGCTTCCTGGCC  37
      |||||||| |||||||||||||||||||||| |||||
seq2  CCCTGCTCCCCAACCCACCCACTCCTGCTTCTTGGCC  37

seq1: chr12_69389669_69390810
seq2: B6Ng01-139D01.g_65_1198 (reverse)

seq1  AACTACCTGATTAAAGTAAACCTCCCTTTCTGTGAATATATATATATATA  50
      ||||||| |  ||||||||||  ||||||||||| ||||| |||||||| 
seq2  AACTACCCGTATAAAGTAAACTCCCCTTTCTGTG-ATATA-ATATATATC  48

seq1  CTAGTTAATAGTGAAGCCG-CATTGAGGATGGATTCTATTGGGAGTAAAT  99
      ||||||||||| | ||||| |||||||||| |||||||||  ||||||||
seq2  CTAGTTAATAG-GGAGCCGCCATTGAGGAT-GATTCTATT--GAGTAAAT  94

seq1  AAAGACTTGTAGTCTGAGAACAGACAGCAGTCATGATAGTTCTTAGACAA  149
      ||||||||||||||| ||||||||||||||||||||||||||||||||| 
seq2  AAAGACTTGTAGTCT-AGAACAGACAGCAGTCATGATAGTTCTTAGACAT  143

seq1  TGTAGCACTGCAGAATGTGTGGCAGCAGGCATATTTTCTCAAA-CCAGCT  198
      |||||||||||||||||||| |||||||||||| ||||||||| ||||||
seq2  TGTAGCACTGCAGAATGTGT-GCAGCAGGCATA-TTTCTCAAACCCAGCT  191

seq1  CTTTGAGGTACAATAAGATGATTTATAAATAAGAGTAGCGGACAGGTCAT  248
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  C-TTGAGGTACAATAAGATGATTTATAAATAAGAGTAGCGGACAGGTCAT  240

seq1  TTATTAAGATTAATATCCATCAGGTACATGATGATCCACTGGAGTAAGAT  298
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TTATTAAGATTTATATCCATCAGGTACATGATGATCCACTGGAGTAAGAT  290

seq1  GTAGGAGGTTGAAAATGACTTCCCAAATTCCAACTTCGTTGCCAGGAAAA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGAGGTTGAAAATGACTTCCCAAATTCCAACTTCGTTGCCAGGAAAA  340

seq1  CTGAGTCTTTCTTAGCACAGAAAATTCAAAATAAGATGAAAAAGCAGCAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTCTTTCTTAGCACAGAAAATTCAAAATAAGATGAAAAAGCAGCAA  390

seq1  GATGGAGAAAAACCTAAAAAGGTATCTTTGGTCTCTTAAAGTGAATATAC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGAGAAAAACCTAAAAAGGTATCTTTGGTCTCTTAAAGTGAATATAC  440

seq1  CTTAGAGACAAAGTAGAACATTCCCATATAAATGTATATATATGCCAAGG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGAGACAAAGTAGAACATTCCCATATAAATGTATATATATGCCAAGG  490

seq1  ATGGTGGGAAGTAGTCCCCTCTATAGATAGACCTTGGAATTACTGGCCCT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTGGGAAGTAGTCCCCTCTATAGATAGACCTTGGAATTACTGGCCCT  540

seq1  TATGTAATACTTGCAGTTCATCAATGACCCCAATATGACTATAGAAACAT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTAATACTTGCAGTTCATCAATGACCCCAATATGACTATAGAAACAT  590

seq1  GGCCCATCATGGCCTGAGCTTTGCAGTCTGGATGGTGGAATGAGAGAAAG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCATCATGGCCTGAGCTTTGCAGTCTGGATGGTGGAATGAGAGAAAG  640

seq1  AGTTGTCCACATAAGAGACTGAAAGAACTCCATTAAAACAGAAAGGGAGA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGTCCACATAAGAGACTGAAAGAACTCCATTAAAACAGAAAGGGAGA  690

seq1  AAGAAGCTGGAGAAATTAGAAGCTATTGGTTTTACAAGGTTAAAAACAAT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGCTGGAGAAATTAGAAGCTATTGGTTTTACAAGGTTAAAAACAAT  740

seq1  GTGTTTGCATAGAGTGGAAACAGTCCTGTCATTTAGAAAACAAGAAAAAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTGCATAGAGTGGAAACAGTCCTGTCATTTAGAAAACAAGAAAAAA  790

seq1  AAGCATTCAAGACAACGAACTGATTTGCCGGTGCCCATTATTAACCAGCC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCATTCAAGACAACGAACTGATTTGCCGGTGCCCATTATTAACCAGCC  840

seq1  AATTGGTCTGGATCTTTAAATGTTTATTACTTTAATATACAAAACACTCC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGGTCTGGATCTTTAAATGTTTATTACTTTAATATACAAAACACTCC  890

seq1  ATTCTATTTCATCTCTATAGAGTAACATTTTCTTACTTCTTGTGAGGTAG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTATTTCATCTCTATAGAGTAACATTTTCTTACTTCTTGTGAGGTAG  940

seq1  AGTACAATTCATTTGTTTTAAGATTTAAAAAACAAAATAAAAATTTTGGA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACAATTCATTTGTTTTAAGATTTAAAAAACAAAATAAAAATTTTGGA  990

seq1  CCTTCAAACTTAAGAACCCCTGGATTTCTTGGAAAACATAATCCTCTTTT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCAAACTTAAGAACCCCTGGATTTCTTGGAAAACATAATCCTCTTTT  1040

seq1  GAAACTTATTCAGTCATATCATCTTGTTCTTTGAGGAAATACACTTTGCC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTTATTCAGTCATATCATCTTGTTCTTTGAGGAAATACACTTTGCC  1090

seq1  TTATTCATTCTCCCCATTAGACTCCTTCTAAGATAAGTGAATTC  1142
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCATTCTCCCCATTAGACTCCTTCTAAGATAAGTGAATTC  1134