BAC Information

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BAC

Clone NameB6Ng01-140F04
Chromosome12 (Build37)
Map Location 64,799,348 - 64,800,143
singlet/doubletsinglet
Overlap genenone
Upstream geneTspyl-ps, EG665741, EG382606
Downstream geneLOC435302, EG623046
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-140F04.bB6Ng01-140F04.g
ACCDH939085DH939086
length9651,237
definitionDH939085|Mus musculus domesticus DNA, BAC clone: B6Ng01-140F04, 5' end.DH939086|Mus musculus domesticus DNA, BAC clone: B6Ng01-140F04, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatggtagagaatatttctgtggctaggtaagtatcacaaagaaa
tggagatgggctggtaggaaaaggtgaaagggctgtagcaatgaactagg
agtagcctgggtctgcattaacaggctaagtttccatggaatgaaggtgg
gattgaggaggagctcctgtgtgcaggttgctgtagtaataaatctggag
aatccagaatggaagacaggaattataataaagtttgcctacctgcgtat
agcctaccctagccactgggtcctacacagtacagaataatactgtgggt
aggtgggcacaaaaaagatggacttgaaaggaaggttgttaagaatggat
tctgttggtgggattacaagcttgtacaaccactctggaaaccagtctgg
tggttccttagaaaattggacatagtactaccggaggatccagcaatacc
tcttctgggcatagatccagaagatgtcccaaccggtatgaaggacacat
gctccactatgttcatagcagccttatttataatagccagaagctggaaa
gaacccagatgcccctcaacagaggaatggatacagaaaatgtggtacat
ttacacaatggagtactactcagctattaaaaagaatgaatttatgaaat
tcctaggcaaatggatggacctggagggcataattctgagcgaggtaacc
caatcacaaaggaactcacacaatatgtactcactgataagtggatacta
gcccaaaacttaaagagatctgcaaccttggaggtgcaacaacattatga
actaaccagtaccccggagctcttgactctagctacatatgtatcaaaag
atggcctagtcggccatcactggaaagagaggcccatcagacacacaaac
tttatatgccccagtacaggggacaccagggccaaaaaatgagattgggt
gggtaggggagtggg
gaattctacataaaacaagagatagtgaaatttatagagtagaaagtggg
gaaaaccctcgaagatatgggcacaggggaaaaaatacctaaacagaaca
gcaatggcctgtgctgtaagatcaagaatcaataaatgggacctcataaa
attgcaaagtttctatagcgcaaaagatactgtcaataagacagaaaggc
caccaacagattggaaaagaatttttaccaatcctaaatctgataggaga
ctaatatccaatatatacaaagagctcaatatgctggactccagaaattc
aaataaccccattaaaaaatggggctcagagctgaacaaagaattctcac
ctgaggaataccgaagggctgagaagcacttgaaaaatttttcaatgtcc
ttaatcatcagggaaatgcaaatcaaaacaaccctgagattccacctcac
accagtcagaatggctaatgtcaaaacttcaggtggcagcagatgttggc
aagaatgtggagaaagaggaacactcctccatttgttggtgggattgcaa
gcttgtacaaccactctggaaatcagtctggcggttcctcagaaaattgg
acatagtactaccgaaggatcctacaatacctctcctgggcatataccca
gaagatgttccaaccggtaagaaggacacatgctccactatgttcatagc
agtcctatttataatagccagaagctggaaagaacccagatgtccttcaa
cagaggaatggatacagaaaatgtacatttacacaatggtgtactactca
gctattaaaaaaaaacaatgaatttatgaaattcttgggcaaatggatgt
atctggaggatatcatcctgagtgaggtaatcaatcacaaaagaagtcac
ttgatgtgcactcactgatagtggatttactcagaactagaatactcaga
tagacttaaacacagaaatcaagagagacaggcatagatacttcattcct
tcttagaatacagaataaaatatcatggaggagtgcatgacaagtttgga
tctagatgaatggatggaacattcgagactgcctcaactggaatccactc
taatcgcctacaaccggactatatgctattcaccagtttgctgaagacct
ggaattgtcgttcatgagcttgcagcctgcgaatccaatggaagtctcac
tctcatgaatggtaaacggagactcacgtagctgagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_64799348_64800143
seq2: B6Ng01-140F04.b_399_1011 (reverse)

seq1  CCCACTCCCCTACCCACCCATTCCCACTTTTTGGCCCTGGCGTTCCCCAA  50
      |||||||||||||||||||| || || ||||||||||||| | |||||  
seq2  CCCACTCCCCTACCCACCCAATCTCATTTTTTGGCCCTGGTG-TCCCCTG  49

seq1  AACTGGGGCATATAAAGTTTGCAAGTCCAATGGGCCTCTCTTTCCAGTGA  100
       ||||||||||||||||||||   |||  |||||||||||||||||||||
seq2  TACTGGGGCATATAAAGTTTGTGTGTCTGATGGGCCTCTCTTTCCAGTGA  99

seq1  TGGCAGACTAGGCCATCTTTTGATACATATGCAGCTAGAGTCAAGAGCTC  150
      |||| |||||||||||||||||||||||||| ||||||||||||||||||
seq2  TGGCCGACTAGGCCATCTTTTGATACATATGTAGCTAGAGTCAAGAGCTC  149

seq1  CGGGGTACTGGTTAGTTCATAATGTTGTTGCACATACAGGGTTGCAGATC  200
      ||||||||||||||||||||||||||||||||| | || |||||||||||
seq2  CGGGGTACTGGTTAGTTCATAATGTTGTTGCACCTCCAAGGTTGCAGATC  199

seq1  TCATTAGCTCCTTGGATACTTTCTCTAGCTCCTCCATTGGGGGCCCTGTG  250
      || |||                                            
seq2  TCTTTA--------------------------------------------  205

seq1  ATCCATCCACTGTGAGCTGACTGTGAGCATCCACTTCTGTGTTTGATAGG  300
                                                        
seq2  --------------------------------------------------  205

seq1  CCCAGCCTAGTCTCACAAGAGACAGCTATATCATGGTCCTTGCAACAAAC  350
                                                        
seq2  --------------------------------------------------  205

seq1  GCTTACTAGTGTATGCAATGGTGTCAGTGTTTGGAGGCTGATTATGGGCT  400
                                        ||     || ||||||
seq2  ----------------------------------AG-----TTTTGGGCT  216

seq1  AATATCCACTTATCAGTGAGTACATATCATTTGACTTCTTTTGTGATTGT  450
      | |||||||||||||||||||||||||  | ||| ||| |||||||||| 
seq2  AGTATCCACTTATCAGTGAGTACATATTGTGTGAGTTCCTTTGTGATTGG  266

seq1  GTTACCTCACTCAGGATGATGCCCTCCAGGTCCAACCATTTGCCTAGGAA  500
      |||||||| ||||| || |||||||||||||||| |||||||||||||||
seq2  GTTACCTCGCTCAGAATTATGCCCTCCAGGTCCATCCATTTGCCTAGGAA  316

seq1  TTTCATAAATTCATTCTTTTTAATAGCTGAGTAGTACTCCATTGTGTAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATAAATTCATTCTTTTTAATAGCTGAGTAGTACTCCATTGTGTAAA  366

seq1  TGTACCACATTTTTTGTATCCATTCCTCTGTTGAGGGGCATCTGGGTTCT  600
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TGTACCACATTTTCTGTATCCATTCCTCTGTTGAGGGGCATCTGGGTTCT  416

seq1  TTCCAGCTTCTGGCTACTATAAATAAAGCTGCTATTAACATAGTGGAGCA  650
      |||||||||||||||| ||||||||| |||||||| ||||||||||||||
seq2  TTCCAGCTTCTGGCTATTATAAATAAGGCTGCTATGAACATAGTGGAGCA  466

seq1  TGTGTCCTTTTTACCGGTTGGGACATCTTCTGGATATATGCCCAGGAGAG  700
      |||||||||  |||||||||||||||||||||||| ||||||||| ||||
seq2  TGTGTCCTTCATACCGGTTGGGACATCTTCTGGATCTATGCCCAGAAGAG  516

seq1  GTATTGCAGGATCCTCCAATAGTACTATGTCCAATTTTCTGAGGAACCTC  750
      ||||||| |||||||||  ||||||||||||||||||||| ||||||| |
seq2  GTATTGCTGGATCCTCCGGTAGTACTATGTCCAATTTTCTAAGGAACCAC  566

seq1  CAGACTGATTTCCAGA-TGGTTGTACAAGCTTGCAATCCCACCAACA  796
      ||||||| |||||||| |||||||||||||||| |||||||||||||
seq2  CAGACTGGTTTCCAGAGTGGTTGTACAAGCTTGTAATCCCACCAACA  613