BAC Information

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BAC

Clone NameB6Ng01-141E02
Chromosome12 (Build37)
Map Location 110,097,180 - 110,224,404
singlet/doubletdoublet
Overlap geneWars, Wdr25
Upstream geneBcl11b, Setd3, Ccnk, EG668158, 1600002O04Rik, Cyp46a1, Eml1, Evl, Degs2, LOC668164, Yy1, Slc25a29, AI132487
Downstream geneBM948371, LOC668194, Dlk1, Gtl2, Rtl1, 6430411K18Rik, B830012L14Rik, LOC100040715, LOC100040724, LOC675987, LOC100041509, LOC100040746
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-141E02.bB6Ng01-141E02.g
ACCDH939758DH939759
length718656
definitionDH939758|Mus musculus domesticus DNA, BAC clone: B6Ng01-141E02, 5' end.DH939759|Mus musculus domesticus DNA, BAC clone: B6Ng01-141E02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(110,223,689 - 110,224,404)(110,097,180 - 110,097,835)
sequence
gaattcatctgtggttaaattaaaagctaaagccaagggatgctgggttt
taaccatgggaaccttaagagactaatgactgctgggctttcccgggagg
cctggagaacacagcaggcctgggctgccttgcacctttgctgaggagcc
ttgcagaaaggaaaggcgggagataagtcagcaaggagaagcttgaccaa
gagcactggccgctctgaggtgaaggtctttctcctggaatccgtggcac
tctctcacctcccccaaacggtcgcctgtctatcagttctccccctgggc
ggggcttcttcttgggctagctgtaacagacctttcaccttgggactatc
ttgcttgtctgcttgttataggaatttctgtttattcactgcaggcttat
aggaaattgagctttaaaatatgtaatccattggcacttggctgtattga
tctggttataatgagctcaaccagtataaaaactgtttggatcttcttgg
agttaagaaaaattacttcttttcccttttggatcgataatgatacaaat
agaaactatgtttctgggcttgggggggggggtgtcagcacagagtcctt
gcttatgagtctgaggctccaagttcaatccacagccctagaataaaccg
tccttttaaagcaaagccatgggttcagggttccacagaaactctgagta
ttcacttccctaaacact
gaattctctgaaccatttggtactggacactattccaggctgccccatta
aatagcctgcataactttcagggagctcagagagaccacaggtttttggc
gaatgtggcagtggatgttgcagacttgaggctaccttcactctgaggag
cagcagccttgggcatcacctttgtatttttacatggaggagatggagct
cgcaggaggacaagtgactcacccagttgtggctgacgggggatgggatg
gcctgggccctcattcctccctgggcccaggatcccacctaagccatcag
acgacagcaatgtctttctcacctccacactagaacgttccatgggtgca
atggtgcttcaatgtcagggcattatttgagtggcattggtcatcttgga
ccacagcaagagagcaaggcaatcctctctctgtttggccacctttggcc
acacccaggtaggtgaggtgttggcctgggaagtgtggtcagtctaatgg
gagggggccacctccacgccacactttgacactctcaggctctgagtcca
agagcttggcttcccagggttccgtacttagtgttcttaggattaagcca
gaacagactgctcagcagtaaactcactgtctggccttggacaggtcatg
tctggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_110223689_110224404
seq2: B6Ng01-141E02.b_46_763 (reverse)

seq1  AGTGTTT-GGAGAGTGAGTACTCAGAGTTTCTGTGGAACCCTTGAACCAT  49
      ||||||| ||  ||||| ||||||||||||||||||||||||  | ||||
seq2  AGTGTTTAGGGAAGTGAATACTCAGAGTTTCTGTGGAACCCTGAACCCAT  50

seq1  GGCTTTGCTTT-AAAGGACGGTTTATTCTAGGGCTGTGGATTGAACTTGG  98
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  GGCTTTGCTTTAAAAGGACGGTTTATTCTAGGGCTGTGGATTGAACTTGG  100

seq1  AGCCTCAGACTCATAAGCAAGGACTCTGTGCTGACACCCCCCCCCCCAAG  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTCAGACTCATAAGCAAGGACTCTGTGCTGACACCCCCCCCCCCAAG  150

seq1  CCCAGAAACATAGTTTCTATTTGTATCATTATCGATCCAAAAGGGAAAAG  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGAAACATAGTTTCTATTTGTATCATTATCGATCCAAAAGGGAAAAG  200

seq1  AAGTAATTTTTCTTAACTCCAAGAAGATCCAAACAGTTTTTATACTGGTT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAATTTTTCTTAACTCCAAGAAGATCCAAACAGTTTTTATACTGGTT  250

seq1  GAGCTCATTATAACCAGATCAATACAGCCAAGTGCCAATGGATTACATAT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTCATTATAACCAGATCAATACAGCCAAGTGCCAATGGATTACATAT  300

seq1  TTTAAAGCTCAATTTCCTATAAGCCTGCAGTGAATAAACAGAAATTCCTA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAGCTCAATTTCCTATAAGCCTGCAGTGAATAAACAGAAATTCCTA  350

seq1  TAACAAGCAGACAAGCAAGATAGTCCCAAGGTGAAAGGTCTGTTACAGCT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAAGCAGACAAGCAAGATAGTCCCAAGGTGAAAGGTCTGTTACAGCT  400

seq1  AGCCCAAGAAGAAGCCCCGCCCAGGGGGAGAACTGATAGACAGGCGACCG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCAAGAAGAAGCCCCGCCCAGGGGGAGAACTGATAGACAGGCGACCG  450

seq1  TTTGGGGGAGGTGAGAGAGTGCCACGGATTCCAGGAGAAAGACCTTCACC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGGGAGGTGAGAGAGTGCCACGGATTCCAGGAGAAAGACCTTCACC  500

seq1  TCAGAGCGGCCAGTGCTCTTGGTCAAGCTTCTCCTTGCTGACTTATCTCC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGCGGCCAGTGCTCTTGGTCAAGCTTCTCCTTGCTGACTTATCTCC  550

seq1  CGCCTTTCCTTTCTGCAAGGCTCCTCAGCAAAGGTGCAAGGCAGCCCAGG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCTTTCCTTTCTGCAAGGCTCCTCAGCAAAGGTGCAAGGCAGCCCAGG  600

seq1  CCTGCTGTGTTCTCCAGGCCTCCCGGGAAAGCCCAGCAGTCATTAGTCTC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCTGTGTTCTCCAGGCCTCCCGGGAAAGCCCAGCAGTCATTAGTCTC  650

seq1  TTAAGGTTCCCATGGTTAAAACCCAGCATCCCTTGGCTTTAGCTTTTAAT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGGTTCCCATGGTTAAAACCCAGCATCCCTTGGCTTTAGCTTTTAAT  700

seq1  TTAACCACAGATGAATTC  716
      ||||||||||||||||||
seq2  TTAACCACAGATGAATTC  718

seq1: chr12_110097180_110097835
seq2: B6Ng01-141E02.g_68_723

seq1  GAATTCTCTGAACCATTTGGTACTGGACACTATTCCAGGCTGCCCCATTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGAACCATTTGGTACTGGACACTATTCCAGGCTGCCCCATTA  50

seq1  AATAGCCTGCATAACTTTCAGGGAGCTCAGAGAGACCACAGGTTTTTGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGCCTGCATAACTTTCAGGGAGCTCAGAGAGACCACAGGTTTTTGGC  100

seq1  GAATGTGGCAGTGGATGTTGCAGACTTGAGGCTACCTTCACTCTGAGGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTGGCAGTGGATGTTGCAGACTTGAGGCTACCTTCACTCTGAGGAG  150

seq1  CAGCAGCCTTGGGCATCACCTTTGTATTTTTACATGGAGGAGATGGAGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGCCTTGGGCATCACCTTTGTATTTTTACATGGAGGAGATGGAGCT  200

seq1  CGCAGGAGGACAAGTGACTCACCCAGTTGTGGCTGACGGGGGATGGGATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCAGGAGGACAAGTGACTCACCCAGTTGTGGCTGACGGGGGATGGGATG  250

seq1  GCCTGGGCCCTCATTCCTCCCTGGGCCCAGGATCCCACCTAAGCCATCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGGGCCCTCATTCCTCCCTGGGCCCAGGATCCCACCTAAGCCATCAG  300

seq1  ACGACAGCAATGTCTTTCTCACCTCCACACTAGAACGTTCCATGGGTGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGACAGCAATGTCTTTCTCACCTCCACACTAGAACGTTCCATGGGTGCA  350

seq1  ATGGTGCTTCAATGTCAGGGCATTATTTGAGTGGCATTGGTCATCTTGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTGCTTCAATGTCAGGGCATTATTTGAGTGGCATTGGTCATCTTGGA  400

seq1  CCACAGCAAGAGAGCAAGGCAATCCTCTCTCTGTTTGGCCACCTTTGGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGCAAGAGAGCAAGGCAATCCTCTCTCTGTTTGGCCACCTTTGGCC  450

seq1  ACACCCAGGTAGGTGAGGTGTTGGCCTGGGAAGTGTGGTCAGTCTAATGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCCAGGTAGGTGAGGTGTTGGCCTGGGAAGTGTGGTCAGTCTAATGG  500

seq1  GAGGGGGCCACCTCCACGCCACACTTTGACACTCTCAGGCTCTGAGTCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGGGCCACCTCCACGCCACACTTTGACACTCTCAGGCTCTGAGTCCA  550

seq1  AGAGCTTGGCTTCCCAGGGTGCAAATCTTAGTGTTCTCAGGATTAAGCCA  600
      |||||||||||||||||||| |    ||||||||||| ||||||||||||
seq2  AGAGCTTGGCTTCCCAGGGTTCCGTACTTAGTGTTCTTAGGATTAAGCCA  600

seq1  GAACAGACTGCTCAGCAGTAAACTCACTGTCTGGCCTTGGACAGGTCATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAGACTGCTCAGCAGTAAACTCACTGTCTGGCCTTGGACAGGTCATG  650

seq1  TCTGCC  656
      |||| |
seq2  TCTGGC  656