BAC Information

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BAC

Clone NameB6Ng01-142I14
Chromosome12 (Build37)9 (Build37)
Map Location 38,485,437 - 38,485,491113,043,312 - 113,044,418
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneMeox2, A530016O06Rik
Downstream geneLOC100043139, Dgkb, LOC668824, LOC100043142
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-142I14.bB6Ng01-142I14.g
ACCDH940711DH940712
length1051,107
definitionDH940711|Mus musculus domesticus DNA, BAC clone: B6Ng01-142I14, 5' end.DH940712|Mus musculus domesticus DNA, BAC clone: B6Ng01-142I14, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(38,485,437 - 38,485,491)(113,043,312 - 113,044,418)
sequence
gaattccatgaccataggaatgtgaggcacctggtcacgaggcaaccaca
gtgaggaaggggagagagagagagagagagagggagagagagagagagag
agaga
gaattcaggacctctggaagagcagtcaggctcataactactaagccatc
tctccagccctacagtatgattttccaagtaaaaggaagaatatgtgcca
ggcgatagtggcacatacttttaatcccagcacttgggaggcagaggcag
gcagatttctgagttcaaggccagcctggtctacagagtgagttccagga
cagccagggctacacagagaaagcctgtctcgaaacaaacaaacaaaaac
agacaaacaaaaaaagaaaatgtttacacatagcaaatacattatccatc
ttcaatcatatctggtgataactttcctgactgaagaaattccagacact
aaatccaacccttcttgattttatgagttttaagtagttcgatgtggtct
gttattttgcaaagtggctctgttccgaagccactccaaatgtatgcaat
ggtgggtagtagtgagctatggaagttttgagactggttcagcatctcag
atcacagattgctcacctttaactacaagaaaatactgtgagctgtgaag
gatttaatacgaaccaagtaagagcagccatgtggtgtgcttaacataga
acagggccagcagggcccaaagtaactcaccaccacctgctcgcaaagtt
tctcaagagtggtggtagggagttgaagaggtttatatatgtggctttat
tcctagggtgtcacaatcccccatcaacccatcaacttccttgcacagta
caatgtctagatatactggtgctataccaaaaatcagtccatagcagagc
agttgctttccacaaatacaaaccaccccttatatgattttaaaacaagc
tttgcttgaatgacatagtcctgactcacaaatgtgatgacccccaaata
agttgatgatagctgcttccatattagcatctaaactaaaataagatgcc
tccttcgattcttcataagaattaagactaaagactgggtctcatgaaat
tttttcctggaaaggtcaagcagtgtttcaccttatggttttttaagaac
agcattctcataaattcaacgcttacaattcagcttaaacaactggcagg
gatcctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_38485437_38485491
seq2: B6Ng01-142I14.b_100_152 (reverse)

seq1  TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCCACT  50
      |||||||||||||||||||||| |||||||||||||||||||||||  ||
seq2  TCTCTCTCTCTCTCTCTCTCTCCCTCTCTCTCTCTCTCTCTCTCCC--CT  48

seq1  TCCTC  55
      |||||
seq2  TCCTC  53

seq1: chr9_113043312_113044418
seq2: B6Ng01-142I14.g_68_1174

seq1  GAATTCAGGACCTCTGGAAGAGCAGTCAGGCTCATAACTACTAAGCCATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGACCTCTGGAAGAGCAGTCAGGCTCATAACTACTAAGCCATC  50

seq1  TCTCCAGCCCTACAGTATGATTTTCCAAGTAAAAGGAAGAATATGTGCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCAGCCCTACAGTATGATTTTCCAAGTAAAAGGAAGAATATGTGCCA  100

seq1  GGCGATAGTGGCACATACTTTTAATCCCAGCACTTGGGAGGCAGAGGCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGATAGTGGCACATACTTTTAATCCCAGCACTTGGGAGGCAGAGGCAG  150

seq1  GCAGATTTCTGAGTTCAAGGCCAGCCTGGTCTACAGAGTGAGTTCCAGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGATTTCTGAGTTCAAGGCCAGCCTGGTCTACAGAGTGAGTTCCAGGA  200

seq1  CAGCCAGGGCTACACAGAGAAAGCCTGTCTCGAAACAAACAAACAAAAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCAGGGCTACACAGAGAAAGCCTGTCTCGAAACAAACAAACAAAAAC  250

seq1  AGACAAACAAAAAAAGAAAATGTTTACACATAGCAAATACATTATCCATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAAACAAAAAAAGAAAATGTTTACACATAGCAAATACATTATCCATC  300

seq1  TTCAATCATATCTGGTGATAACTTTCCTGACTGAAGAAATTCCAGACACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATCATATCTGGTGATAACTTTCCTGACTGAAGAAATTCCAGACACT  350

seq1  AAATCCAACCCTTCTTGATTTTATGAGTTTTAAGTAGTTCGATGTGGTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCAACCCTTCTTGATTTTATGAGTTTTAAGTAGTTCGATGTGGTCT  400

seq1  GTTATTTTGCAAAGTGGCTCTGTTCCGAAGCCACTCCAAATGTATGCAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTTTGCAAAGTGGCTCTGTTCCGAAGCCACTCCAAATGTATGCAAT  450

seq1  GGTGGGTAGTAGTGAGCTATGGAAGTTTTGAGACTGGTTCAGCATCTCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGGTAGTAGTGAGCTATGGAAGTTTTGAGACTGGTTCAGCATCTCAG  500

seq1  ATCACAGATTGCTCACCTTTAACTACAAGAAAATACTGTGAGCTGTGAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACAGATTGCTCACCTTTAACTACAAGAAAATACTGTGAGCTGTGAAG  550

seq1  GATTTAATACGAACCAAGTAAGAGCAGCCATGTGGTGTGCTTAACATAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTAATACGAACCAAGTAAGAGCAGCCATGTGGTGTGCTTAACATAGA  600

seq1  ACAGGGCCAGCAGGGCCCAAAGTAACTCACCACCACCTGCTCGCAAAGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGGCCAGCAGGGCCCAAAGTAACTCACCACCACCTGCTCGCAAAGTT  650

seq1  TCTCAAGAGTGGTGGTAGGGAGTTGAAGAGGTTTATATATGTGGC-TTAT  699
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TCTCAAGAGTGGTGGTAGGGAGTTGAAGAGGTTTATATATGTGGCTTTAT  700

seq1  TCCTAGGGTGTCACAATCCCCCATCAACCCATCAACTTCCTTGCACAGTA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAGGGTGTCACAATCCCCCATCAACCCATCAACTTCCTTGCACAGTA  750

seq1  CAATGTCTAGATATACTGGTGCTATACCAAAAATCAGTCCATAGCAGAGC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGTCTAGATATACTGGTGCTATACCAAAAATCAGTCCATAGCAGAGC  800

seq1  AGTTGCTTTCCACAAATACAAACCACCCCTTATATGAATTTTAAAACAAG  849
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  AGTTGCTTTCCACAAATACAAACCACCCCTTATATG-ATTTTAAAACAAG  849

seq1  CTTTGCTTGAATGACATAGTCCTGACTCACAAATGTGATGACCCCCAAAA  899
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CTTTGCTTGAATGACATAGTCCTGACTCACAAATGTGATGACCCCC-AAA  898

seq1  TAAGTTGATGATAGCTGCTTCCATATTAGCATCTAAACTAAAAT-AGATG  948
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TAAGTTGATGATAGCTGCTTCCATATTAGCATCTAAACTAAAATAAGATG  948

seq1  CCTCCTTCGATTCTCCATAAGAATT-AGACTAGAGACT-GGTCTCATGAA  996
      |||||||||||||| |||||||||| |||||| ||||| |||||||||||
seq2  CCTCCTTCGATTCTTCATAAGAATTAAGACTAAAGACTGGGTCTCATGAA  998

seq1  ATTTTTTCCT-GAAATGTCAAGCAGTGTCTCAACCTTATGGTTTTTTAAG  1045
      |||||||||| |||| |||||||||||| || ||||||||||||||||||
seq2  ATTTTTTCCTGGAAAGGTCAAGCAGTGTTTC-ACCTTATGGTTTTTTAAG  1047

seq1  -ACAGCATCTCTCACTAAATCCAACGCTCACCAATTCAGCTAGACCAACT  1094
       ||||||| ||||| ||||| ||||||| | ||||||||||  | |||||
seq2  AACAGCAT-TCTCA-TAAATTCAACGCTTA-CAATTCAGCTTAAACAACT  1094

seq1  GCCAGGGATCCTC  1107
      | |||||||||||
seq2  GGCAGGGATCCTC  1107