BAC Information

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BAC

Clone NameB6Ng01-142J04
Chromosome12 (Build37)
Map Location 40,382,215 - 40,490,234
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC668824, LOC100043142, Etv1, LOC100043145
Downstream geneLOC100043148, Arl4a, LOC100043606, Scin, Gm889, Ifrd1, EG629820, Zfp277, Dock4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-142J04.bB6Ng01-142J04.g
ACCDH940735DH940736
length957774
definitionDH940735|Mus musculus domesticus DNA, BAC clone: B6Ng01-142J04, 5' end.DH940736|Mus musculus domesticus DNA, BAC clone: B6Ng01-142J04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(40,382,215 - 40,383,173)(40,489,461 - 40,490,234)
sequence
gaattctcaaagaaccaatccaagaaacaattatcctatatttaagacca
ttcttgtgtaaaaactatttgcagaactctattataatcttaagactcat
tttactaataaccgccaatgctaatccgtcagcttttgccagttcgacaa
acaccacaagtgccagtgaaattattatcaaaacaactttcagagatttc
tctgtcctaacaaaagccccactttaacttggttctctggatactctgca
gcattctggcttatgcataatatccctgcttctttgttcattcccaaatg
aaagttcctttattgaactttttctctatagtttaactttcaatataaaa
aacattgatatataggatgaggctctgcctcctaaaatttccaccacctt
cttaaataggaccaactaggaagcaagtattcaaattcatgaacctaaaa
ggggggaggaattcctcaccaaaatcttcacattcagccctgtgctctcc
aaaagttcaaggccatttcatagtgtaaaatgcacatagtaccgctttaa
aagtccctgataatttcctgctgaaagactacacttcccaggttcccttg
cagactatggaagttatttccacccttataagaggccacatccatcttct
tctgtaggcattttggacatctacacacatgggcgataaggatgtctgtc
ctcttcccataaacatttccacctgaggttaggccaagcctctctttccc
ccttcccatctctctccagctgctttagataatctaatatgatgatccca
aaagacccaggaaggcatctcctaaccctaccccttcctatggcaaagat
ctttaagcttttattccaggacctgagggtttttcagacctctgatttgt
ctcagctgtcttctctctctctctctctctccctctctctctctctctct
ctctctc
gaattcaaattattcttcattctttgatggagaggtggtattacatgatt
acaaatgtcacctttgacttttctgggttaagctgtgactagcaagcaat
gaaacttacacaaacaaatggcccttattatgtttctgttgggttacagt
gcatgaaaatgaattgaattcacattcagacagtttaaaaaaggttttat
ttcagtatttctgatctttccaacctgcggtggaaatttgtaatacatat
tttaatttttactatgcaattagtatgcatttgatattttactgataaga
atactaggtaattgtacctgaatgcattttttgattatctgtgtattgaa
gaaatgtcttcttcatgaatatagaaaatgaagagtgtaaaaaccagttg
tatgctgaaaccctgatacagtcactgttagcatagtgatagtttctctt
tgtagcacaagatcctaattgaactaaataaaaacagaagtgaatatatt
aaaaaaaaccattaaaaggaaaattcaccaagcacagcactatcacagta
aaaattaaaactatggaacagaaagtgttcgcaataaatgtcagttttca
taggggtgtaggaagaaatatttggagccataagcaatgggaaatgccag
catgcagatattgtttaaaagtagttcttttaaggattatcattgtgtga
atgtgcatatgcaagcatgcatacctctgtgtatgtgtgtgaatgtgtgt
gtgtgtgtgtctgtgtgtgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_40382215_40383173
seq2: B6Ng01-142J04.b_44_1000

seq1  GAATTCTCAAAGAACCAATCCAAGAAACAATTATCCTATATTTAAGACCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAAAGAACCAATCCAAGAAACAATTATCCTATATTTAAGACCA  50

seq1  TTCTTGTGTAAAAACTATTTGCAGAACTCTATTATAATCTTAAGACTCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGTGTAAAAACTATTTGCAGAACTCTATTATAATCTTAAGACTCAT  100

seq1  TTTACTAATAACCGCCAATGCTAATCCGTCAGCTTTTGCCAGTTCGACAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTAATAACCGCCAATGCTAATCCGTCAGCTTTTGCCAGTTCGACAA  150

seq1  ACACCACAAGTGCCAGTGAAATTATTATCAAAACAACTTTCAGAGATTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCACAAGTGCCAGTGAAATTATTATCAAAACAACTTTCAGAGATTTC  200

seq1  TCTGTCCTAACAAAAGCCCCACTTTAACTTGGTTCTCTGGATACTCTGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCCTAACAAAAGCCCCACTTTAACTTGGTTCTCTGGATACTCTGCA  250

seq1  GCATTCTGGCTTATGCATAATATCCCTGCTTCTTTGTTCATTCCCAAATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTCTGGCTTATGCATAATATCCCTGCTTCTTTGTTCATTCCCAAATG  300

seq1  AAAGTTCCTTTATTGAACTTTTTCTCTATAGTTTAACTTTCAATATAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTCCTTTATTGAACTTTTTCTCTATAGTTTAACTTTCAATATAAAA  350

seq1  AACATTGATATATAGGATGAGGCTCTGCCTCCTAAAATTTCCACCACCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTGATATATAGGATGAGGCTCTGCCTCCTAAAATTTCCACCACCTT  400

seq1  CTTAAATAGGACCAACTAGGAAGCAAGTATTCAAATTCATGAACCTAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAATAGGACCAACTAGGAAGCAAGTATTCAAATTCATGAACCTAAAA  450

seq1  GGGGGGAGGAATTCCTCACCAAAATCTTCACATTCAGCCCTGTGCTCTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGGAGGAATTCCTCACCAAAATCTTCACATTCAGCCCTGTGCTCTCC  500

seq1  AAAAGTTCAAGGCCATTTCATAGTGTAAAATGCACATAGTACCGCTTTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTTCAAGGCCATTTCATAGTGTAAAATGCACATAGTACCGCTTTAA  550

seq1  AAGTCCCTGATAATTTCCTGCTGAAAGACTACACTTCCCAGGTTCCCTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCCCTGATAATTTCCTGCTGAAAGACTACACTTCCCAGGTTCCCTTG  600

seq1  CAGACTATGGAAGTTATTTCCACCCTTATAAGAGGCCACATCCATCTTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACTATGGAAGTTATTTCCACCCTTATAAGAGGCCACATCCATCTTCT  650

seq1  TCTGTAGGCATTTTGGACATCTACACACATGGGCGATAAGGATGTCTGTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTAGGCATTTTGGACATCTACACACATGGGCGATAAGGATGTCTGTC  700

seq1  CTCTTCCCATAAACATTTCCACCTGAGGTTAGGCCAAGCCTCTCTTTCCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCCCATAAACATTTCCACCTGAGGTTAGGCCAAGCCTCTCTTTCCC  750

seq1  CCTTCCCATCTCTCTCCAGCTGCTTTAGATAATCTAATATGATGATCCCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCCATCTCTCTCCAGCTGCTTTAGATAATCTAATATGATGATCCCA  800

seq1  AAAGACCCAGGAAGGCATCTCCTAACCCTACCCCTTCCTATGGCAAAGAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACCCAGGAAGGCATCTCCTAACCCTACCCCTTCCTATGGCAAAGAT  850

seq1  CTTTAAGCTTTTATTCCAGGACCTGAGGGTTTTTCAGGACCTCTGATTTG  900
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CTTTAAGCTTTTATTCCAGGACCTGAGGGTTTTTCA-GACCTCTGATTTG  899

seq1  TCTCAGGCTGTCTTCTCTCTCTCTCTCTCTCTCCCTCTCTCTCTCTCTCT  950
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCA-GCTGTCTTCTCTCTCTCTCTCTCTCTCCCTCTCTCTCTCTCTCT  948

seq1  CTCTCTCTC  959
      |||||||||
seq2  CTCTCTCTC  957

seq1: chr12_40489461_40490234
seq2: B6Ng01-142J04.g_65_838 (reverse)

seq1  ACACACACACACAGACACACACACACACACATTCACACACATACACAGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACAGACACACACACACACACATTCACACACATACACAGAG  50

seq1  GTATGCATGCTTGCATATGCACATTCACACAATGATAATCCTTAAAAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGCATGCTTGCATATGCACATTCACACAATGATAATCCTTAAAAGAA  100

seq1  CTACTTTTAAACAATATCTGCATGCTGGCATTTCCCATTGCTTATGGCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTTTTAAACAATATCTGCATGCTGGCATTTCCCATTGCTTATGGCTC  150

seq1  CAAATATTTCTTCCTACACCCCTATGAAAACTGACATTTATTGCGAACAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATATTTCTTCCTACACCCCTATGAAAACTGACATTTATTGCGAACAC  200

seq1  TTTCTGTTCCATAGTTTTAATTTTTACTGTGATAGTGCTGTGCTTGGTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGTTCCATAGTTTTAATTTTTACTGTGATAGTGCTGTGCTTGGTGA  250

seq1  ATTTTCCTTTTAATGGTTTTTTTTAATATATTCACTTCTGTTTTTATTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCCTTTTAATGGTTTTTTTTAATATATTCACTTCTGTTTTTATTTA  300

seq1  GTTCAATTAGGATCTTGTGCTACAAAGAGAAACTATCACTATGCTAACAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAATTAGGATCTTGTGCTACAAAGAGAAACTATCACTATGCTAACAG  350

seq1  TGACTGTATCAGGGTTTCAGCATACAACTGGTTTTTACACTCTTCATTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTGTATCAGGGTTTCAGCATACAACTGGTTTTTACACTCTTCATTTT  400

seq1  CTATATTCATGAAGAAGACATTTCTTCAATACACAGATAATCAAAAAATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATTCATGAAGAAGACATTTCTTCAATACACAGATAATCAAAAAATG  450

seq1  CATTCAGGTACAATTACCTAGTATTCTTATCAGTAAAATATCAAATGCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCAGGTACAATTACCTAGTATTCTTATCAGTAAAATATCAAATGCAT  500

seq1  ACTAATTGCATAGTAAAAATTAAAATATGTATTACAAATTTCCACCGCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAATTGCATAGTAAAAATTAAAATATGTATTACAAATTTCCACCGCAG  550

seq1  GTTGGAAAGATCAGAAATACTGAAATAAAACCTTTTTTAAACTGTCTGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGAAAGATCAGAAATACTGAAATAAAACCTTTTTTAAACTGTCTGAA  600

seq1  TGTGAATTCAATTCATTTTCATGCACTGTAACCCAACAGAAACATAATAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAATTCAATTCATTTTCATGCACTGTAACCCAACAGAAACATAATAA  650

seq1  GGGCCATTTGTTTGTGTAAGTTTCATTGCTTGCTAGTCACAGCTTAACCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCATTTGTTTGTGTAAGTTTCATTGCTTGCTAGTCACAGCTTAACCC  700

seq1  AGAAAAGTCAAAGGTGACATTTGTAATCATGTAATACCACCTCTCCATCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAGTCAAAGGTGACATTTGTAATCATGTAATACCACCTCTCCATCA  750

seq1  AAGAATGAAGAATAATTTGAATTC  774
      ||||||||||||||||||||||||
seq2  AAGAATGAAGAATAATTTGAATTC  774