BAC Information

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BAC

Clone NameB6Ng01-143P12
Chromosome12 (Build37)
Map Location 12,843,632 - 12,940,163
singlet/doubletdoublet
Overlap geneLOC100043215
Upstream geneLOC627110, LOC100043209, D12Ertd553e
Downstream geneMycn, EG668473, LOC628449, Ddx1, LOC627199, LOC627189, LOC100043243, LOC100042396, LOC238091, EG633789, LOC668481
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-143P12.bB6Ng01-143P12.g
ACCDH941766DH941767
length486331
definitionDH941766|Mus musculus domesticus DNA, BAC clone: B6Ng01-143P12, 5' end.DH941767|Mus musculus domesticus DNA, BAC clone: B6Ng01-143P12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(12,939,672 - 12,940,163)(12,843,632 - 12,843,962)
sequence
aagattgccaccagaggggatggggagccaggccagtgcagatgcacctg
gtccttggacctgtggaggaaaacgcaaggtgactgacagggctgctcag
ccaccagagcaagctgctcaggttctccatttagtccgtctcccctcctc
acaccctggacatgcgtgttccctactacgtcctttgcctatctgctgaa
agcgaagcatcaaactatgatgcagctgcagtctgattccctgggactga
gtcccacagttaacacagttcctcatattgtggtgacccccagccataaa
agcatttttgttgctacttcataactatgattttgctactgttatgaatc
gtagtgtaaatatctgatatgtaaaatatctgatatgaaaccccagtgaa
agggctgttcaaccccacaactgtttccacccacagactgagagtctctg
ctacagagaaaggtgtgtgtgtgtgtgggggggggg
caaagctgtgagccaaaattcaccatttttcttgataaattaactctccc
aagcattttgttatagtgaagggaagctgactacccttatgcccatctct
aaattatgagtattgtcaaaatttttaacagagaaccattgacagccagg
tgtggagttatgagccacaaatcccagcagcttaagaggtacggggtata
gggtgaggatgggggtgggcggcagggagctgcatagtgagaacctggtt
taaaaaaaaaaaaaaaaaacaagcaaaagtttggtatgctaacccaggcc
tgaacccctaactgctccccgaatggagata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_12939672_12940163
seq2: B6Ng01-143P12.b_50_541 (reverse)

seq1  CCCCCCCCCCACACACACACACACCTTTCTCTGTAGCAGAGACTCTCAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCCCCCACACACACACACACCTTTCTCTGTAGCAGAGACTCTCAGT  50

seq1  CTGTGGGTGGAAACAGTTGTGGGGTTGAACAGCCCTTTCACTGGGGTTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGGTGGAAACAGTTGTGGGGTTGAACAGCCCTTTCACTGGGGTTTC  100

seq1  ATATCAGATATTTTACATATCAGATATTTACACTACGATTCATAACAGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCAGATATTTTACATATCAGATATTTACACTACGATTCATAACAGTA  150

seq1  GCAAAATCATAGTTATGAAGTAGCAACAAAAATGCTTTTATGGCTGGGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAATCATAGTTATGAAGTAGCAACAAAAATGCTTTTATGGCTGGGGG  200

seq1  TCACCACAATATGAGGAACTGTGTTAACTGTGGGACTCAGTCCCAGGGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCACAATATGAGGAACTGTGTTAACTGTGGGACTCAGTCCCAGGGAA  250

seq1  TCAGACTGCAGCTGCATCATAGTTTGATGCTTCGCTTTCAGCAGATAGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGACTGCAGCTGCATCATAGTTTGATGCTTCGCTTTCAGCAGATAGGC  300

seq1  AAAGGACGTAGTAGGGAACACGCATGTCCAGGGTGTGAGGAGGGGAGACG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGACGTAGTAGGGAACACGCATGTCCAGGGTGTGAGGAGGGGAGACG  350

seq1  GACTAAATGGAGAACCTGAGCAGCTTGCTCTGGTGGCTGAGCAGCCCTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAAATGGAGAACCTGAGCAGCTTGCTCTGGTGGCTGAGCAGCCCTGT  400

seq1  CAGTCACCTTGCGTTTTCCTCCACAGGTCCAAGGACCAGGTGCATCTGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCACCTTGCGTTTTCCTCCACAGGTCCAAGGACCAGGTGCATCTGCA  450

seq1  CTGGCCTGGCTCCCCATCCCCTCTGGTGGCAATCTTGAATTC  492
      ||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCCTGGCTCCCCATCCCCTCTGGTGGCAATCTTGAATTC  492

seq1: chr12_12843632_12843962
seq2: B6Ng01-143P12.g_76_406

seq1  CAAAGCTGTGAGCCAAAATTCACCATTTTTCTTGATAAATTAACTCTCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGCTGTGAGCCAAAATTCACCATTTTTCTTGATAAATTAACTCTCCC  50

seq1  AAGCATTTTGTTATAGTGAAGGGAAGCTGACTACCCTTATGCCCATCTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCATTTTGTTATAGTGAAGGGAAGCTGACTACCCTTATGCCCATCTCT  100

seq1  AAATTATGAGTATTGTCAAAATTTTTAACAGAGAACCATTGACAGCCAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTATGAGTATTGTCAAAATTTTTAACAGAGAACCATTGACAGCCAGG  150

seq1  TGTGGAGTTATGAGCCACAAATCCCAGCAGCTTAAGAGGTACGGGGTATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGAGTTATGAGCCACAAATCCCAGCAGCTTAAGAGGTACGGGGTATA  200

seq1  GGGTGAGGATGGGGGTGGGCGGCAGGGAGCTGCATAGTGAGAACCTGGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGAGGATGGGGGTGGGCGGCAGGGAGCTGCATAGTGAGAACCTGGTT  250

seq1  TAAAAAAAAAAAAAAAAAACAAGCAAAAGTTTGGTATGCTAACCCAGGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAAAAAAAAAAAAAACAAGCAAAAGTTTGGTATGCTAACCCAGGCC  300

seq1  TGAACCCCTAACTGCTCCCCGAATGGAGAGA  331
      ||||||||||||||||||||||||||||| |
seq2  TGAACCCCTAACTGCTCCCCGAATGGAGATA  331