BAC Information

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BAC

Clone NameB6Ng01-144P08
Chromosome12 (Build37)
Map Location 6,770,238 - 6,771,052
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042095, LOC672098, LOC100043137, LOC238049, LOC100042118
Downstream geneLOC668380
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-144P08.bB6Ng01-144P08.g
ACCDH942498DH942499
length1,223819
definitionDH942498|Mus musculus domesticus DNA, BAC clone: B6Ng01-144P08, 5' end.DH942499|Mus musculus domesticus DNA, BAC clone: B6Ng01-144P08, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaccatgataaaagcaatctacagcaaagta
gtagccaacatgaaagtaaatggtgataagctggaagcaatcccactaaa
atcagggactagacaaggctgtccactctctccctacctattcaacattg
tacttgaagtcctagccagagcaattcgacaacaaaagatcaaggggatc
caaagtggaatgggagaagtcaaaatatcactttttgcagatgatatgat
agtatatataagtgacctaaaaattcaactagagaactcctaagcctgac
aaacagcttcaatgaagttgctggataaaaaattaactcaaacaagtcaa
tgtcctttctctacacaaaggataaacaggatgcgaaagaaattagggaa
acaacacccttctcaatagtcacaaataatataaaataccttggcgtgac
tctaacttaggaagtgaaagatctgtatgataaaaacttcaagtgtctga
agaaaaaatttaaagaagatctcagaagttggaaagatctcccatgctca
tggattggcaggatcaatatagtaaaaatggttatcttgccaaaaccaat
ctacagattcaatgcaatccccatcaaaattccaactcaattcttcaatg
aattagaaagggcaatcggcacattcttctagaataacaaataacttagg
ataggaaaaactgttctcaaggataaaagaacctctggtggaatcaccat
gcctgacctaaagctgtactacagagaaattgtgataaaaactgcatggt
actggtatagcaacagacaagtagtagatcaatggaatataattgaagac
gcagagatgaacccacacacctctggccacttcatctttgacaagggaac
taaaaccatccagtggaaaaagagagcattttcacaaatggtgctggtac
agctggcggttatgatgtagagatgagaatgatacattcctatctccttg
tactaatgtcaaatctagtggattagattcacataagcagagacactgaa
cttatagaggagaaagtaggaaggctcgaagattgagtacaggaaatctg
aatgacgcatgcttgtgctgtagatcagatgatatgaacctaaaattgaa
ctctgcagcaaaccgttatagaataaagaactcaacgatggaaaggactt
tactctatctctaaagtctcgat
gaattcatagcctttcaaaggttatgatttagatgtagcttgcgtctgag
attaccaaacataaaagcccaaatttagggctaaatcattcataaaacta
caattttattgaagtagcaaaatagacattgccctacttataaacaaaac
cagggaaaacgaatcccagaactacctataagatctcatcttcatgtatc
atgccaggaacatattttagactttaatgggaaaacttctttttaaattt
ggtatggtttgaaaaccacctcaggcaaaataagcatttatatattattt
ttaatttatccctttatttcatcattcatttacgaggttgaatgccctct
ttgatgcatgaaggtgtacactgccaaacaacattaagttgaattttaat
ccaagattaatcctgatgtcagcagcactagcctgactcctctaattcat
ttaccacccagtagtcaaaatgactttctttcaaacacacgtgcaaatca
aatcaatacactgtgtgttgctttgttctagaatctcttttccttttgta
attaattaatttatttatatcgcactgtcccagaacccctctcccaatct
gcctctcttcctattgctaatgtgttgcccctctgctatttcaataatac
aggtattcttagatttttccctagagatattgtactttgtacttcatcat
ccctgatatgtctatgtgcatgtgtgtgtgtgtctctgtgcgtgcatgtg
tgtatatgtatgtatatattatgtatatatatatatatatatatatatgc
gcggggagagatacacaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_6770238_6771052
seq2: B6Ng01-144P08.g_64_882 (reverse)

seq1  TGTGTGTATATAT----ATATATATATATATATATATATATATATACATA  46
      ||||||||| | |        |||||||||||||||||||||||||||||
seq2  TGTGTGTATCTCTCCCCGCGCATATATATATATATATATATATATACATA  50

seq1  ATATATACATACATATACACACATGCACGCACAGAGACACACACACACAT  96
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATACATACATATACACACATGCACGCACAGAGACACACACACACAT  100

seq1  GCACATAGACATATCAGGGATGATGAAGTACAAAGTACAATATCTCTAGG  146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATAGACATATCAGGGATGATGAAGTACAAAGTACAATATCTCTAGG  150

seq1  GAAAAATCTAAGAATACCTGTATTATTGAAATAGCAGAGGGGCAACACAT  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAATCTAAGAATACCTGTATTATTGAAATAGCAGAGGGGCAACACAT  200

seq1  TAGCAATAGGAAGAGAGGCAGATTGGGAGAGGGGTTCTGGGACAGTGCGA  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAATAGGAAGAGAGGCAGATTGGGAGAGGGGTTCTGGGACAGTGCGA  250

seq1  TATAAATAAATTAATTAATTACAAAAGGAAAAGAGATTCTAGAACAAAGC  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAATAAATTAATTAATTACAAAAGGAAAAGAGATTCTAGAACAAAGC  300

seq1  AACACACAGTGTATTGATTTGATTTGCACGTGTGTTTGAAAGAAAGTCAT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACACAGTGTATTGATTTGATTTGCACGTGTGTTTGAAAGAAAGTCAT  350

seq1  TTTGACTACTGGGTGGTAAATGAATTAGAGGAGTCAGGCTAGTGCTGCTG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGACTACTGGGTGGTAAATGAATTAGAGGAGTCAGGCTAGTGCTGCTG  400

seq1  ACATCAGGATTAATCTTGGATTAAAATTCAACTTAATGTTGTTTGGCAGT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCAGGATTAATCTTGGATTAAAATTCAACTTAATGTTGTTTGGCAGT  450

seq1  GTACACCTTCATGCATCAAAGAGGGCATTCAACCTCGTAAATGAATGATG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACACCTTCATGCATCAAAGAGGGCATTCAACCTCGTAAATGAATGATG  500

seq1  AAATAAAGGGATAAATTAAAAATAATATATAAATGCTTATTTTGCCTGAG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAAGGGATAAATTAAAAATAATATATAAATGCTTATTTTGCCTGAG  550

seq1  GTGGTTTTCAAACCATACCAAATTTAAAAAGAAGTTTTCCCATTAAAGTC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTTTTCAAACCATACCAAATTTAAAAAGAAGTTTTCCCATTAAAGTC  600

seq1  TAAAATATGTTCCTGGCATGATACATGAAGATGAGATCTTATAGGTAGTT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATATGTTCCTGGCATGATACATGAAGATGAGATCTTATAGGTAGTT  650

seq1  CTGGGATTCGTTTTCCCTGGTTTTGTTTATAAGTAGGGCAATGTCTATTT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGATTCGTTTTCCCTGGTTTTGTTTATAAGTAGGGCAATGTCTATTT  700

seq1  TGCTACTTCAATAAAATTGTAGTTTTATGAATGATTTAGCCCTAAATTTG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTACTTCAATAAAATTGTAGTTTTATGAATGATTTAGCCCTAAATTTG  750

seq1  GGCTTTTATGTTTGGTAATCTCAGACGCAAGCTACATCTAAATCATAACC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTTTATGTTTGGTAATCTCAGACGCAAGCTACATCTAAATCATAACC  800

seq1  TTTGAAAGGCTATGAATTC  815
      |||||||||||||||||||
seq2  TTTGAAAGGCTATGAATTC  819