BAC Information

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BAC

Clone NameB6Ng01-145J11
Chromosome12 (Build37)
Map Location 61,592,797 - 61,593,765
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC665644, EG622488
Downstream geneLOC665665, Ppia-ps12_475.1, LOC100040300, LOC665677, Nanog-ps2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-145J11.bB6Ng01-145J11.g
ACCDH942955DH942956
length1,047964
definitionDH942955|Mus musculus domesticus DNA, BAC clone: B6Ng01-145J11, 5' end.DH942956|Mus musculus domesticus DNA, BAC clone: B6Ng01-145J11, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggctgagaaacacctgaaaaaatg
ttcagcatccttaatcatcagggaaatgcaaatcaaaacaagatttcatc
tcacagatttctcagaaaattggacatggtactactggaggatcctgcaa
tacctctcctgggcatatatctagaagatgttccatctagtaagaaagaa
acatgttccactatgttcatagcagccttatttataatagccagaagctg
gaaagaacccagaagcccctcaatagaggaatggataaaaaaaaatgtgg
tacctttacacaatggagtactattcggctattaaaaagaatgaatttat
gaaattcctaagcaaatggttggacctggatggcattatcctgagtgagt
taacccaatcacaaaagaactcaaatgatatgtgctcactgataagtgga
tattagcccagaaacttagaatatccaagatataatttacaatttgcaaa
acacatgaaactcaagaagaatgaagaccaaagtgtggacactttgcccc
ttcttagaaatgggaacaaaacacccatggaaggagttacagagtcaaag
tttgtagctgagacgaaaggatggaccatctagagactgctatatccagg
gatccaccccataatcagcctgcaaaagctgacaccattgcatacactag
caagattgtgtggataggaccctgatatagctgtttctagtgagactatg
ctggggccttgaaaacacataagtggatgctcacagtcagctattggatg
gatcacaggacccccaatgaaggagctagagaaaatacccaaggagctgc
taaagggatctgcaaccctataggcagaacaatattatgaactaaccagt
accctgcagctctgactctagctgcatatgtatcaaaagatggcctagtc
ggcaacactggaaagagaggcccattgacttgcaaactttatctgcttca
tacaggggaatgccaagtcaaaagtgggagtggttgggtaggggatg
gaattcaatttagtagatgtgcttttctttggttgtttccctttgagttg
aagaaagacaaaaaatgcagtcaggtggataaagttgagggaggatcttg
aaggtcttggaagaggggaaagattcaagatacattctatgaaaactgta
aaagatgatactaaatgagtaaaatatgttaaatgtgaataacttgtgaa
aatagtgctagccacctgtagagttgtatataaagatcatgtgaaattaa
attactacaaaaataaagaaaatatgcttttaaatatgtaaccaatagaa
atgatagtgaaggattttgtattctccttgacttggtgctttatcagctg
atttaagatacataaggaaggctggtgagatggctcagtgggtaagagca
cccgactgctcttccaaaggtccagagttcaaatcccagcaaccacatgg
tggctcacaaccatccttaaggagatctgactcactcttctgaagtgtct
gaagacagctacaatgtacttccatataacaaataaataaatctttaaaa
aaaagatacataaggaaaagcaatgaaaatataaagaagttaaaacattc
tccctgaaagtaagctacctataaagataccaagcagggaaaatacatgt
ttttcactccagaagacccaacaagcagctgaaagagtcagatgcagaca
tttgcacccaaccaatggacagaaacagctacccctgttgttgaattagg
gaaaggctgaagaagctgaggaaaagagcaatcctgtaggagacccagca
atctcaattaatctgaacccctgagatcaggcagcctatactcactgata
tgagtccccaatagcagagaactgcctggtttgttttcattagagatgat
gcaactaacccttagagactggaggcccaaggagtttagaggtcaggtgg
ggtgggaggtgggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_61592797_61593765
seq2: B6Ng01-145J11.g_69_1032 (reverse)

seq1  CCCCACCTTCCCACCCCACCTGACCTCTAAACTCCCTGGGGCCTCCAGTC  50
      ||||||| ||||||||||||||||||||||||| ||| ||||||||||||
seq2  CCCCACC-TCCCACCCCACCTGACCTCTAAACT-CCTTGGGCCTCCAGTC  48

seq1  TCTTAAGGGTTAGTTGCATCATCTCTAATGAAAACAAACCAGGCAGTTCT  100
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TC-TAAGGGTTAGTTGCATCATCTCTAATGAAAACAAACCAGGCAGTTCT  97

seq1  CTGCTATTGGGGGACTCATATCAGTGGGTATAGGCTGCCTGATCTCAGGG  150
      |||||||| ||||||||||||||||| |||||||||||||||||||||||
seq2  CTGCTATT-GGGGACTCATATCAGTGAGTATAGGCTGCCTGATCTCAGGG  146

seq1  GTTCAGATTAATTGAGATTGCTGGGTCTCCTACAGGATTGCTCTTTTCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAGATTAATTGAGATTGCTGGGTCTCCTACAGGATTGCTCTTTTCCT  196

seq1  CAGCTTCTTTCAGCCTTTCCCTAATTCAACAACAGGGGTAGCTGTTTCTG  250
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTTC-TTCAGCCTTTCCCTAATTCAACAACAGGGGTAGCTGTTTCTG  245

seq1  TCCATTGGTTGGGTGCAAATGTCTGCATCTGACTCTTTCAGCTGCTTGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTGGTTGGGTGCAAATGTCTGCATCTGACTCTTTCAGCTGCTTGTT  295

seq1  GGGTCTTCTGGAGTGAAAAACATGTATTTTCCCTGCTTGGTATCTTTATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCTTCTGGAGTGAAAAACATGTATTTTCCCTGCTTGGTATCTTTATA  345

seq1  GGTAGCTTACTTTCAGGGAGAATGTTTTAACTTCTTTATATTTTCATTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGCTTACTTTCAGGGAGAATGTTTTAACTTCTTTATATTTTCATTGC  395

seq1  TTTTCCTTATGTATCTTTTTTTTAAAGATTTATTTATTTGTTATATGGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCTTATGTATCTTTTTTTTAAAGATTTATTTATTTGTTATATGGAA  445

seq1  GTACATTGTAGCTGTCTTCAGACACTTCAGAAGAGTGAGTCAGATCTCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACATTGTAGCTGTCTTCAGACACTTCAGAAGAGTGAGTCAGATCTCCT  495

seq1  TAAGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCTGGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCTGGAC  545

seq1  CTTTGGAAGAGCAGTCGGGTGCTCTTACCCACTGAGCCATCTCACCAGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGAAGAGCAGTCGGGTGCTCTTACCCACTGAGCCATCTCACCAGCC  595

seq1  TTCCTTATGTATCTTAAATCAGCTGATAAAGCACCAAGTCAAGGAGAATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTATGTATCTTAAATCAGCTGATAAAGCACCAAGTCAAGGAGAATA  645

seq1  CAAAATCCTTCACTATCATTTCTATTGGTTACATATTTAAAAGCATATTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATCCTTCACTATCATTTCTATTGGTTACATATTTAAAAGCATATTT  695

seq1  TCTTTATTTTTGTAGTAATTTAATTTCACATGATCTTTATATACAACTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTATTTTTGTAGTAATTTAATTTCACATGATCTTTATATACAACTCT  745

seq1  ACAGGTGGCTAGCACTATTTTCACAAGTTATTCACATTTAACATATTTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGTGGCTAGCACTATTTTCACAAGTTATTCACATTTAACATATTTTA  795

seq1  CTCATTTAGTATCATCTTTTACAGTTTTCATAGAATGTATCTTGAATCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATTTAGTATCATCTTTTACAGTTTTCATAGAATGTATCTTGAATCTT  845

seq1  TCCCCTCTTCCAAGACCTTCAAGATCCTCCCTCAACTTTATCCACCTGAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTCTTCCAAGACCTTCAAGATCCTCCCTCAACTTTATCCACCTGAC  895

seq1  TGCATTTTTTGTCTTTCTTCAACTCAAAGGGAAACAACCAAAGAAAAGCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTTTTTGTCTTTCTTCAACTCAAAGGGAAACAACCAAAGAAAAGCA  945

seq1  CATCTACTAAATTGAATTC  969
      |||||||||||||||||||
seq2  CATCTACTAAATTGAATTC  964