BAC Information

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BAC

Clone NameB6Ng01-145P10
Chromosome12 (Build37)
Map Location 71,941,275 - 72,098,797
singlet/doubletdoublet
Overlap geneFrmd6, Actr10, Psma3
Upstream geneMap4k5, Spg3a, EG622339, Sav1, LOC100040999, Nin, ENSMUSG00000056391, Gm804, Pygl, Trim9, Txndc1, LOC100040965, LOC100041061
Downstream gene3110056K07Rik, Arid4a, Timm9, LOC100041035, 2700049A03Rik, LOC666162, Dact1, LOC100041190, Daam1, LOC666213
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-145P10.bB6Ng01-145P10.g
ACCDH943230DH943231
length1,080771
definitionDH943230|Mus musculus domesticus DNA, BAC clone: B6Ng01-145P10, 5' end.DH943231|Mus musculus domesticus DNA, BAC clone: B6Ng01-145P10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(71,941,275 - 71,942,361)(72,098,029 - 72,098,797)
sequence
gaattctctgcttaacgaaacctatgtgaatgcagtgttaatgttttcat
agtaaattaaagtcagcttcagggggccagtttgacatattttaaggaat
tcaagttactcatagaaggtgattttttaaataacattttaaagcctact
acttcatataaacctaagattttcaaatgtaacattaaaaatattttttc
aaaaatcaaattaaggaacagttcacacacacacacacacacacacacaa
atgtctagtgcctaaaatttacagtaaattctaattgaatatgtttaaaa
tgaagcctttctaatcacaagagttcatttcagacatcagaaaaaggaca
tttagacgatttgtaactcactgaattatttgcttttacaggtgcctaga
gaaacattaaaagagaaatttccatgaagtcacagagtaaaacctggtcc
agaaaactaatggaagtgacccagatagagtagaaaattgcctttatcaa
tagcctgtgtgctcttaagtaggcctgcttcctgagaagtacggtgttag
gagcttgggaatgagggtggtacagagagagatctaaattaatacgtttt
aatgcctgcttagatagggttttactgctatgaaaggataccatgaccaa
agcaactcttacaaaggacaacatttagttggggctggcttacaggttca
gagattcagtccattatcatcaaagcaggagtatggcagcgttcaggcaa
ccatgggactgaaggagctgatagttccaggcaactaagcaggcaactag
gaagatcttaaagcccactctctcagtgacacacccagtccaacaaggcc
atacctcctaatagtgttactccctgagccaaaagtatacagaccatcac
aatgtataaccaatttttttgttgttgaatagacatcgaaatagcatttt
aaattgcctaagagatggaaaggctgtgacttttgtttgaggccttgggt
gtgctgccttgagcagctagactgcgtttcggggcaccctagtgggtgaa
ttggtgtggtggtgatcctgcatgtgtttt
gaattctcatccaaccagtgtccaggaaactccctggattccgtttcatg
tcttgttggaatttatgtcctccaattcttaaagcaaattcttaaagcaa
atatcacaatgcaggcttgtgatagcccttggtaatagttatatttctgc
ttttctcactgagaaagagcttgaaaatttttaacttagttacagtggta
tacattgtaaaagttcaaataacccctttaaaattgctgctgtctaatga
agatcaaaactgtcctacctatcctaaaaaaaaaaaaaaaaaaccttttt
attgtaaatgtatgagtattttgtccgcatgtatgtctctgcatgcctgg
tacccaagaaagccagaagagggcgttggatcccttggagctgagtttac
aggtggctgcgagcagtctgaggtgggtgctgggaactgaactctataat
cctctgcaaaagtggcaagcagctctctgattcccagggtctactctttt
tttgtcttttggggttgtttgtttgttttggggttttgttttttgttttt
cgaggccgggtttctctgtatatcccaggctgccctggaactcactcaga
aaatccgcctgcctctgcctctcgagcgctgggattaaaggcgtgcgcca
ccatgcccggccctcagtgtctactcttaagaaaattgttctatatgaac
cagaaagataaatatagtaatttacccttcaaggggtgagatgatcaaaa
aggacattttaattgttttaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_71941275_71942361
seq2: B6Ng01-145P10.b_47_1126

seq1  GAATTCTCTGCTTAACGAAACCTATGTGAATGCAGTGTTAATGTTTTCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGCTTAACGAAACCTATGTGAATGCAGTGTTAATGTTTTCAT  50

seq1  AGTAAATTAAAGTCAGCTTCAGGGGGCCAGTTTGACATATTTTAAGGAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAATTAAAGTCAGCTTCAGGGGGCCAGTTTGACATATTTTAAGGAAT  100

seq1  TCAAGTTACTCATAGAAGGTGATTTTTTAAATAACATTTTAAAGCCTACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGTTACTCATAGAAGGTGATTTTTTAAATAACATTTTAAAGCCTACT  150

seq1  ACTTCATATAAACCTAAGATTTTCAAATGTAACATTAAAAATATTTTTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCATATAAACCTAAGATTTTCAAATGTAACATTAAAAATATTTTTTC  200

seq1  AAAAATCAAATTAAGGAACAGTTCACACACACACACACACACACACACAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATCAAATTAAGGAACAGTTCACACACACACACACACACACACACAA  250

seq1  ATGTCTAGTGCCTAAAATTTACAGTAAATTCTAATTGAATATGTTTAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTAGTGCCTAAAATTTACAGTAAATTCTAATTGAATATGTTTAAAA  300

seq1  TGAAGCCTTTCTAATCACAAGAGTTCATTTCAGACATCAGAAAAAGGACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGCCTTTCTAATCACAAGAGTTCATTTCAGACATCAGAAAAAGGACA  350

seq1  TTTAGACGATTTGTAACTCACTGAATTATTTGCTTTTACAGGTGCCTAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGACGATTTGTAACTCACTGAATTATTTGCTTTTACAGGTGCCTAGA  400

seq1  GAAACATTAAAAGAGAAATTTCCATGAAGTCACAGAGTAAAACCTGGTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACATTAAAAGAGAAATTTCCATGAAGTCACAGAGTAAAACCTGGTCC  450

seq1  AGAAAACTAATGGAAGTGACCCAGATAGAGTAGAAAATTGCCTTTATCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAACTAATGGAAGTGACCCAGATAGAGTAGAAAATTGCCTTTATCAA  500

seq1  TAGCCTGTGTGCTCTTAAGTAGGCCTGCTTCCTGAGAAGTACGGTGTTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCTGTGTGCTCTTAAGTAGGCCTGCTTCCTGAGAAGTACGGTGTTAG  550

seq1  GAGCTTGGGAATGAGGGTGGTACAGAGAGAGATCTAAATTAATACGTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTTGGGAATGAGGGTGGTACAGAGAGAGATCTAAATTAATACGTTTT  600

seq1  AATGCCTGCTTAGATAGGGTTTTACTGCTATGAAAGGATACCATGACCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCCTGCTTAGATAGGGTTTTACTGCTATGAAAGGATACCATGACCAA  650

seq1  AGCAACTCTTACAAAGGACAACATTTAGTTGGGGCTGGCTTACAGGTTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAACTCTTACAAAGGACAACATTTAGTTGGGGCTGGCTTACAGGTTCA  700

seq1  GAGATTCAGTCCATTATCATCAAAGCAGGAGTATGGCAGCGTTCAGGCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATTCAGTCCATTATCATCAAAGCAGGAGTATGGCAGCGTTCAGGCAA  750

seq1  CCATGGGACTGAAGGAGCTGATAGTTCCAGGCAACTAAGCAGGCAACTAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGGGACTGAAGGAGCTGATAGTTCCAGGCAACTAAGCAGGCAACTAG  800

seq1  GAAGATCTTAAAGCCCACTCTCTCAGTGACACACCCAGTCCAACAAGGCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATCTTAAAGCCCACTCTCTCAGTGACACACCCAGTCCAACAAGGCC  850

seq1  ATACCTCCTAATAGTGTTACTCCCTGAGCCAAAAGTATACAGACCATCAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCTCCTAATAGTGTTACTCCCTGAGCCAAAAGTATACAGACCATCAC  900

seq1  AATGTATAACCAATTTTTTTGTTGTTGAATAGACATCGAAATAGCATTTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTATAACCAATTTTTTTGTTGTTGAATAGACATCGAAATAGCATTTT  950

seq1  AAATTGCCTAAGAGATTGGAAAGGCTGTGAACTTTTGTTTGAGGCCTTGG  1000
      ||||||||||||||| ||||||||||||| ||||||||||||||||||||
seq2  AAATTGCCTAAGAGA-TGGAAAGGCTGTG-ACTTTTGTTTGAGGCCTTGG  998

seq1  GTGTGCTGCCTTGGAGCCAGCTAGACTGCGTTTCGGGGCACCCTAGTTGT  1050
      |||||||||||| ||| ||||||||||||||||||||||||||||||   
seq2  GTGTGCTGCCTT-GAG-CAGCTAGACTGCGTTTCGGGGCACCCTAGT--G  1044

seq1  GGTGAAATGGTGTGGTGGTGATTCCTGCATGTGTTTT  1087
      |||||| |||||||||||||| |||||||||||||||
seq2  GGTGAATTGGTGTGGTGGTGA-TCCTGCATGTGTTTT  1080

seq1: chr12_72098029_72098797
seq2: B6Ng01-145P10.g_69_839 (reverse)

seq1  TTAAAAC-ATTAAAATGTTCCTTTTTGATCATCTCACCCCTTGAAGGGTA  49
      ||||||| ||||||||| ||||||||||||||||||||||||||||||||
seq2  TTAAAACAATTAAAATG-TCCTTTTTGATCATCTCACCCCTTGAAGGGTA  49

seq1  AATTACTATATTTATCTTTCTGGTTCATATAGAACATTTTTCTTAAGAGT  99
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  AATTACTATATTTATCTTTCTGGTTCATATAGAACAATTTTCTTAAGAGT  99

seq1  AGACACTGA-GGCCGGGCATGGTGGCGCACGCCTTTAATCCCAGCGCTCG  148
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  AGACACTGAGGGCCGGGCATGGTGGCGCACGCCTTTAATCCCAGCGCTCG  149

seq1  AGAGGCAGAGGCAGGCGGA-TTTCTGAGTGAGTTCCAGGGCAGCCTGGGA  197
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  AGAGGCAGAGGCAGGCGGATTTTCTGAGTGAGTTCCAGGGCAGCCTGGGA  199

seq1  TATACAGAGAAACCCGGCCTCGAAAAACAAAAAACAAAACCCCAAAACAA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACAGAGAAACCCGGCCTCGAAAAACAAAAAACAAAACCCCAAAACAA  249

seq1  ACAAACAACCCCAAAAGACAAAAAAAGAGTAGACCCTGGGAATCAGAGAG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACAACCCCAAAAGACAAAAAAAGAGTAGACCCTGGGAATCAGAGAG  299

seq1  CTGCTTGCCACTTTTGCAGAGGATTATAGAGTTCAGTTCCCAGCACCCAC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTGCCACTTTTGCAGAGGATTATAGAGTTCAGTTCCCAGCACCCAC  349

seq1  CTCAGACTGCTCGCAGCCACCTGTAAACTCAGCTCCAAGGGATCCAACGC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGACTGCTCGCAGCCACCTGTAAACTCAGCTCCAAGGGATCCAACGC  399

seq1  CCTCTTCTGGCTTTCTTGGGTACCAGGCATGCAGAGACATACATGCGGAC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTTCTGGCTTTCTTGGGTACCAGGCATGCAGAGACATACATGCGGAC  449

seq1  AAAATACTCATACATTTACAATAAAAAGGTTTTTTTTTTTTTTTTTTAGG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATACTCATACATTTACAATAAAAAGGTTTTTTTTTTTTTTTTTTAGG  499

seq1  ATAGGTAGGACAGTTTTGATCTTCATTAGACAGCAGCAATTTTAAAGGGG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGTAGGACAGTTTTGATCTTCATTAGACAGCAGCAATTTTAAAGGGG  549

seq1  TTATTTGAACTTTTACAATGTATACCACTGTAACTAAGTTAAAAATTTTC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTGAACTTTTACAATGTATACCACTGTAACTAAGTTAAAAATTTTC  599

seq1  AAGCTCTTTCTCAGTGAGAAAAGCAGAAATATAACTATTACCAAGGGCTA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTCTTTCTCAGTGAGAAAAGCAGAAATATAACTATTACCAAGGGCTA  649

seq1  TCACAAGCCTGCATTGTGATATTTGCTTTAAGAATTTGCTTTAAGAATTG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAAGCCTGCATTGTGATATTTGCTTTAAGAATTTGCTTTAAGAATTG  699

seq1  GAGGACATAAATTCCAACAAGACATGAAACGGAATCCAGGGAGTTTCCTG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGACATAAATTCCAACAAGACATGAAACGGAATCCAGGGAGTTTCCTG  749

seq1  GACACTGGTTGGATGAGAATTC  769
      ||||||||||||||||||||||
seq2  GACACTGGTTGGATGAGAATTC  771