BAC Information

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BAC

Clone NameB6Ng01-146E22
Chromosome12 (Build37)
Map Location 95,606,573 - 95,764,699
singlet/doubletdoublet
Overlap genenone
Upstream gene2610022K04Rik-ps, EG633639
Downstream geneLOC217786, LOC100039603
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-146E22.bB6Ng01-146E22.g
ACCDH943484DH943485
length9981,089
definitionDH943484|Mus musculus domesticus DNA, BAC clone: B6Ng01-146E22, 5' end.DH943485|Mus musculus domesticus DNA, BAC clone: B6Ng01-146E22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(95,606,573 - 95,607,660)(95,763,593 - 95,764,699)
sequence
gaattctcacaataagctgctttggccaccagaactagctatctccctgg
tcgtggaaacccagtgcagggatgagctactagactgactcccaactctc
tctctctatatatatatatatctatatatatatctatatatatataataa
tctctctctatatatatatagagatagatagatagatagatagatagata
tagacatagacatagacatagacatagacatagacataggcataggcata
ggcataggcataggcataggcataggcatagacatagacatagacataga
catagacatagatacacacacacacacacacacacacacacacacacaca
cacacacacaagttctagggatcaaactcccgttttaaaggaagacaaga
attttggtatctgaatggtctccccaacccatattttgcgcaattttatt
ttatggccttttgtttttattaacttgataaggaattaagttttattatg
tatttgataaatgcacacataatatgtcacttctacagagtaattcactt
agtaatcaatacagaatacacattaatgacattgtttcatcagagagaat
tgacattatacttcactattaatatagtaagttattaatgtatagtaagc
agtacacaggaacttatcttcaatgttaccatataattatagtatatgca
caggacggagatgaacattggttatataagcctgacagcatgataccagg
atatggaggatacgcaaacgatggagaattgagactctgatgtaaatctc
attcttagatagagaagtatattcatgtacatgtcagctggagagagagt
atctcacttctctctgagcatatctatgtagctagtgcgatgatagtctg
caactgtcagatgtgtgctacatggtctactatcagtgtagctaagacac
gttgcgcctctagagctacaatcagcattctgagcaccatgtcagtca
gaattcattggctctcacaagctcttctcttacaaacacacacatacaca
catacacacgcactcacatacacacactcatacacacaaaaccacacatg
cacacaatcacacacagataaataaacaactttttaaatattaaatttag
gacaatctgaatagacaagcccttctatgtaggagtaaaatttttatgtg
attttaaaataatacataacaagccagaataaccatgtatcaagatatca
aggctgttaagacactgttataaaggacagtgttaggaatctcacaagga
cactgttaggaatctcacaagaacaccaagctacatcaccataacatata
tacagagaatcttgttgagactcacaagctcccagttttctgtgacactc
tttgagcctagattagttaattttgcgggttgggttcttgtggtgtgctt
cactccattgctcttccaatccttccttctcttctttcattgaacttccc
aaactccatctaatatttgactgtggaactcttcctgtgttcccattagt
ttctagataaagtttttctgatcacgattatggtaggctatggtcccagc
acatcatgcaagaacgacaaactgcagtttttgtaggttttgggactagg
tcgttgtcctagtctctccatttgaagcctgtctagttacagattttggc
cagaacaagctctgtgccttctattacatggagtttcactagcatcattc
ttgaagatccattagccctaggttttcacctcactcctgaaatgaacacc
cccccccaattctagttgtcttacccagtattcacttcctgaaaagctag
tcattttagaaacattatgcaggtcagcatctagacaagttcttggagta
actctacttattaatcattagtattcattcattgtctttcaattctctca
aagacttgatggtaaaacatccttagaagatgtagaatatattagagggt
tctaaacattctctggcatatgaaacagtatctggttatagaagatgatg
atggataattaagaaatattgagtaggggttgattgact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_95606573_95607660
seq2: B6Ng01-146E22.b_47_1044

seq1  GAATTCTCACAATAAGCTGCTTTGGCCACCAGAACTAGCTATCTCCCTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCACAATAAGCTGCTTTGGCCACCAGAACTAGCTATCTCCCTGG  50

seq1  TCGTGGAAACCCAGTGCAGGGATGAGCTACTAGACTGACTCCCAACTCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTGGAAACCCAGTGCAGGGATGAGCTACTAGACTGACTCCCAACTCTC  100

seq1  TCTCTCTATATATATATATATCTATATATATATCTATATATATATAATAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTATATATATATATATCTATATATATATCTATATATATATAATAA  150

seq1  TCTCTCTCTATATATATATAGAGATAGATAGATAGATAGATAGATAGATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTATATATATATAGAGATAGATAGATAGATAGATAGATAGATA  200

seq1  TAGACATAGACATAGACATAGACATAGACATAGACATAGGCATAGGCATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACATAGACATAGACATAGACATAGACATAGACATAGGCATAGGCATA  250

seq1  GGCATAGGCATAGGCATAGGCATAGGCATAGACATAGACATAGACATAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATAGGCATAGGCATAGGCATAGGCATAGACATAGACATAGACATAGA  300

seq1  CATAGACATAGATACACACACACACACACACACACACACACACACACACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGACATAGATACACACACACACACACACACACACACACACACACACA  350

seq1  CACACACACAAGTTCTAGGGATCAAACTCCCGTTTTAAAGGAAGACAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACAAGTTCTAGGGATCAAACTCCCGTTTTAAAGGAAGACAAGA  400

seq1  ATTTTGGTATCTGAATGGTCTCCCCAACCCATATTTTGCGCAATTTTATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGGTATCTGAATGGTCTCCCCAACCCATATTTTGCGCAATTTTATT  450

seq1  TTATGGCCTTTTGTTTTTATTAACTTTGATAAGGAAATTAAGTTTTTATT  500
      |||||||||||||||||||||||| ||||||||| ||||||| |||||||
seq2  TTATGGCCTTTTGTTTTTATTAAC-TTGATAAGG-AATTAAG-TTTTATT  497

seq1  ATGTATTTGATAAAAATGCACAACATAATATTTTCACTTCTACAGGAGTT  550
      |||||||||||  |||||||| |||||||| | ||||||||||| |||| 
seq2  ATGTATTTGAT--AAATGCAC-ACATAATA-TGTCACTTCTACA-GAGT-  541

seq1  AAATTCACTTAGTTAATCAAATACAGAATACACATTTTAAATGACATTGT  600
       ||||||||||| ||||| |||||||||||||||||   |||||||||| 
seq2  -AATTCACTTAG-TAATC-AATACAGAATACACATT---AATGACATTG-  584

seq1  TTTTCATCCAGAGAGAATTTGACATTTTATACTTTCAACTATTTTAATAT  650
       |||||| ||||||||| ||||||  ||||||||   ||||  |||||||
seq2  -TTTCAT-CAGAGAGAA-TTGACA--TTATACTT--CACTA--TTAATAT  625

seq1  AGTAAGTTAATTAATGTAAATAGTAAGCAGTACACAGGAACTTATCTTTC  700
      |||||||| ||||||||  ||||||||||||||||||||||||||| |||
seq2  AGTAAGTT-ATTAATGT--ATAGTAAGCAGTACACAGGAACTTATC-TTC  671

seq1  AATGTTTACCATATAAAAATTATAGTATATGCACAGGACGGAGATGAAAA  750
      |||| |||||||||   |||||||||||||||||||||||||||||   |
seq2  AATG-TTACCATAT---AATTATAGTATATGCACAGGACGGAGATG---A  714

seq1  ACATTTGGTTTATATAAGCCTGACAGCCATGATACCAGGATAATGGAGGA  800
      |||||  | ||||||||||||||||| |||||||||||||| ||||||||
seq2  ACATT--GGTTATATAAGCCTGACAG-CATGATACCAGGAT-ATGGAGGA  760

seq1  TACGCAAACGATGGAGAATTGGAGACTCTGATGTAAATCTCATTCCTTAG  850
      |||||||||||||||||||| ||||||||||||||||||||||| |||||
seq2  TACGCAAACGATGGAGAATT-GAGACTCTGATGTAAATCTCATT-CTTAG  808

seq1  ATAGAGAAGTATATTTCATGTACAATTGTCAGCTGGAGAGAGAGAAAAAT  900
      ||||||||||||| ||||||||||  |||||||||||||||||| |    
seq2  ATAGAGAAGTATA-TTCATGTACA--TGTCAGCTGGAGAGAGAGTA----  851

seq1  AATCACTTCTCTCTGAAGCCATATTCTTATGTTAACGCTCAGTGCGATGG  950
        ||||||||||||||   |||||   |||||    ||| |||||||| |
seq2  TCTCACTTCTCTCTGA--GCATAT--CTATGT---AGCT-AGTGCGAT-G  892

seq1  ATAAGGTCTGGCAAACTTGTCAAGGATGTGTGCTTACATGGGTCTACTAA  1000
      |||  |||| ||||   |||||  ||||||||| ||||| |||||||| |
seq2  ATA--GTCT-GCAA--CTGTCA--GATGTGTGC-TACAT-GGTCTACT-A  932

seq1  TCCAAGTGTTAAGTCTTTTTAAGAACCACCGTGGCAGTCACACCTAGAGC  1050
      ||  |||||  ||      |||||  |||  ||     | |  |||||||
seq2  TC--AGTGT--AG-----CTAAGA--CACGTTG-----CGCCTCTAGAGC  966

seq1  TACAATCCAGCCAAATGTCTGAGCACACATGCCAGTCA  1088
      |||||| ||||   || ||||||||| |||| ||||||
seq2  TACAAT-CAGC---AT-TCTGAGCAC-CATGTCAGTCA  998

seq1: chr12_95763593_95764699
seq2: B6Ng01-146E22.g_65_1153 (reverse)

seq1  AGTCAATCAACACCTACTCAATTATATTTC-TAATTAATTCACATCATCA  49
      ||||||||||| ||||||||   ||||||| ||||||  || ||||||||
seq2  AGTCAATCAACCCCTACTCA---ATATTTCTTAATTA--TC-CATCATCA  44

seq1  TTCTTCTATAA-CAGATACATGTTTCATAATGGCAGAGAATGTTTTAGAA  98
       |||||||||| ||||||| |||||||| ||| ||||||||| |||||||
seq2  -TCTTCTATAACCAGATAC-TGTTTCAT-ATGCCAGAGAATG-TTTAGAA  90

seq1  CCCTCTAATATTATTCTACATCTCTTAAGGAATGTTTTAACATCAAAGTC  148
      |||||||||| ||||||||||||  ||||| |||||||| |||| |||||
seq2  CCCTCTAATA-TATTCTACATCTTCTAAGG-ATGTTTTACCATC-AAGTC  137

seq1  TTTGAGAGAATTTGAAAGAACAAATGAATGAATAACTAAATGATTAAATA  198
      |||||||||| ||||||||   ||||||||||| ||| ||||||| ||||
seq2  TTTGAGAGAA-TTGAAAGA--CAATGAATGAAT-ACT-AATGATT-AATA  181

seq1  AGTTAGAGTTACTCCAAGAACTTGTCTAGATGCTGACCTGCATAATGTTT  248
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AG-TAGAGTTACTCCAAGAACTTGTCTAGATGCTGACCTGCATAATGTTT  230

seq1  CTAAAATGACTAGCTTTTCAGGAAGTGAATACTGGGTAAGACAACTAGAA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAATGACTAGCTTTTCAGGAAGTGAATACTGGGTAAGACAACTAGAA  280

seq1  TTGGGGGGGGGTGTTCATTTCAGGAGTGAGGTGAAAACCTAGGGCTAATG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGGGGGGGTGTTCATTTCAGGAGTGAGGTGAAAACCTAGGGCTAATG  330

seq1  GATCTTCAAGAATGATGCTAGTGAAACTCCATGTAATAGAAGGCACAGAG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTTCAAGAATGATGCTAGTGAAACTCCATGTAATAGAAGGCACAGAG  380

seq1  CTTGTTCTGGCCAAAATCTGTAACTAGACAGGCTTCAAATGGAGAGACTA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTCTGGCCAAAATCTGTAACTAGACAGGCTTCAAATGGAGAGACTA  430

seq1  GGACAACGACCTAGTCCCAAAACCTACAAAAACTGCAGTTTGTCGTTCTT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAACGACCTAGTCCCAAAACCTACAAAAACTGCAGTTTGTCGTTCTT  480

seq1  GCATGATGTGCTGGGACCATAGCCTACCATAATCGTGATCAGAAAAACTT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGATGTGCTGGGACCATAGCCTACCATAATCGTGATCAGAAAAACTT  530

seq1  TATCTAGAAACTAATGGGAACACAGGAAGAGTTCCACAGTCAAATATTAG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTAGAAACTAATGGGAACACAGGAAGAGTTCCACAGTCAAATATTAG  580

seq1  ATGGAGTTTGGGAAGTTCAATGAAAGAAGAGAAGGAAGGATTGGAAGAGC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGTTTGGGAAGTTCAATGAAAGAAGAGAAGGAAGGATTGGAAGAGC  630

seq1  AATGGAGTGAAGCACACCACAAGAACCCAACCCGCAAAATTAACTAATCT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGAGTGAAGCACACCACAAGAACCCAACCCGCAAAATTAACTAATCT  680

seq1  AGGCTCAAAGAGTGTCACAGAAAACTGGGAGCTTGTGAGTCTCAACAAGA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTCAAAGAGTGTCACAGAAAACTGGGAGCTTGTGAGTCTCAACAAGA  730

seq1  TTCTCTGTATATATGTTATGGTGATGTAGCTTGGTGTTCTTGTGAGATTC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTGTATATATGTTATGGTGATGTAGCTTGGTGTTCTTGTGAGATTC  780

seq1  CTAACAGTGTCCTTGTGAGATTCCTAACACTGTCCTTTATAACAGTGTCT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACAGTGTCCTTGTGAGATTCCTAACACTGTCCTTTATAACAGTGTCT  830

seq1  TAACAGCCTTGATATCTTGATACATGGTTATTCTGGCTTGTTATGTATTA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAGCCTTGATATCTTGATACATGGTTATTCTGGCTTGTTATGTATTA  880

seq1  TTTTAAAATCACATAAAAATTTTACTCCTACATAGAAGGGCTTGTCTATT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAAATCACATAAAAATTTTACTCCTACATAGAAGGGCTTGTCTATT  930

seq1  CAGATTGTCCTAAATTTAATATTTAAAAAGTTGTTTATTTATCTGTGTGT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTGTCCTAAATTTAATATTTAAAAAGTTGTTTATTTATCTGTGTGT  980

seq1  GATTGTGTGCATGTGTGGTTTTGTGTGTATGAGTGTGTGTATGTGAGTGC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGTGTGCATGTGTGGTTTTGTGTGTATGAGTGTGTGTATGTGAGTGC  1030

seq1  GTGTGTATGTGTGTATGTGTGTGTTTGTAAGAGAAGAGCTTGTGAGAGCC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTATGTGTGTATGTGTGTGTTTGTAAGAGAAGAGCTTGTGAGAGCC  1080

seq1  AATGAATTC  1107
      |||||||||
seq2  AATGAATTC  1089