BAC Information

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BAC

Clone NameB6Ng01-146K04
Chromosome12 (Build37)
Map Location 44,663,380 - 44,711,489
singlet/doubletdoublet
Overlap genenone
Upstream genenone
Downstream geneLOC100039059, ENSMUSG00000066507, LOC100039081, LOC664854, Dnajb9, LOC100039062, Pnpla8, Nrcam
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-146K04.bB6Ng01-146K04.g
ACCDH943722DH943723
length1,104947
definitionDH943722|Mus musculus domesticus DNA, BAC clone: B6Ng01-146K04, 5' end.DH943723|Mus musculus domesticus DNA, BAC clone: B6Ng01-146K04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(44,710,368 - 44,711,489)(44,663,380 - 44,663,930)
sequence
gaattcagtgccaacactgacagttaagaccaatgaatggcctatctttc
cccactgagttctaaataatgaaataagatcaatgtagtattttttgctc
aggctcaattttttctttcgaaccaaaagtgacattgtgtcaagtgccac
agtaagacattagattcaataaagatggtgtttcttatacaacacagaat
agtcatttctgtagggaaaatgtctttagttaggacaggaacggagagaa
atgtgagcatttcatgttcttgatccattcattagcaaagaccacttgct
tggggtttccttgtatcctatccattacagagctgcatctcagctatcaa
aaataggtctgttaaccaatttcacaaccctctcagtttaacagcttggt
tctgccctgtgataaatgcccatggctttttaaaaagcatactttcacat
attcaatttcacacatgatgaagcactagattcttttttctgaagggtaa
tcaaagacaatgatgtcttggggagattgctttaaaatgaatccccatgt
atgttagacactttcgttgctatgacaaactagctgataaaatcaacttt
aaagaggatagatttattttggctcacatgggtcaattttcagtatgcag
tgggctgacttctttgcaatggtcctatggtgaggcagagagaatatcat
gacagtgacagatatggcacaggacagagcttacctcatggcagctggaa
agcagaaagataagtagaaataaatgtagggggcaagacaggagaaaggt
ataacttttaaagatgtgttctccaaaactcaccttatctaatcagacct
caaattctacagtttccatcatctccaaatagaatgtttgaggccacttg
tggatggttcaccggtgtgtagtgcccatcattttcaaagtcccacctca
atgttgcattgggaactaacgcttcactgtgatctttaagggacactcta
tagctaaaacacgctctagtctctgaattgtttgtcatctagctgtattt
tagtaatggttctatgttttatgtgcaaggttagaacaacaatcactgta
tagt
gaattcaataagttatatttaggaatacatacacacacccacatgcacac
aacaattaatgaaagtggggctacaaaattgaacacaattggagagaggt
atatgggaaggtttagaaagagaagggaaggaaaaatgcaattgaaatac
agtctcatatgccggggcctaggaaacacagaagtggatgctcacagtca
actagtggatggatcacagggctcccaagggaggagctagagaaagtaag
gagctaaagggatctgcaaccctgtaagtggaacaacattatgaactaac
aagtaccccggagctcttgactctagctgcatatgtatcaaaagatggcc
tagtcggccatcactggaaagagaggcccattggacacacaaactttttt
ttttttttgtgagctattgagtctttttttttccatttttattaggtatt
tagctcatttacatttccaatgctataccaaaagaccccatacccaccca
cccccactcccgtacccacccactccccctatttggccctggcgttcccc
tgtaccggggcacacaaagtctgcgtgtccaatgggcctctctttccagt
gatggccgactaggccatcttttgatacatatgcagctagagtcaagagc
tcaggggtactggttagttcataatgttgttccacctatagggttgaaga
tccctttagctccttgggtactttctctagctcctccattgggagccctg
tgatccatccattagctgactgtgagcatccatttctgtgtttgctaggc
cccggcatagtctcacaagagacagctacatctgggtcctttcaataaaa
atctttgctagtgtatgcaatggtgtcagcatttgggatgctgattatgg
ggtggatccctggatattgcagtctctacatgggtccatcctttcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_44710368_44711489
seq2: B6Ng01-146K04.b_44_1147 (reverse)

seq1  ACTATTACAGTTGAATTTGTTGTTCCTTTAAACTTTGCACATAAAACATA  50
      |||| ||||| |||  |||||||||     ||| ||||||||||||||||
seq2  ACTA-TACAG-TGA--TTGTTGTTC----TAACCTTGCACATAAAACATA  42

seq1  GAACCATTACCTAAAATACAGCTAGATGACCAAACAAATTCAGAGACTTA  100
      ||||||||| ||||||||||||||||||| ||||| ||||||||||| ||
seq2  GAACCATTA-CTAAAATACAGCTAGATGA-CAAAC-AATTCAGAGAC-TA  88

seq1  GAGCGTTGTTTTAGCTATAGAGTGTCCCCTTAAAAGATCACAAGTTGAAG  150
      ||||| ||||||||||||||||||||||  | ||||||||||   |||||
seq2  GAGCG-TGTTTTAGCTATAGAGTGTCCC--TTAAAGATCACA--GTGAAG  133

seq1  CCTTAGTTCCCAATGCAACATTTGAGGTGGGACTTTGAAAATGATGGGCA  200
      | |||||||||||||||||| |||||||||||||||||||||||||||||
seq2  CGTTAGTTCCCAATGCAACA-TTGAGGTGGGACTTTGAAAATGATGGGCA  182

seq1  CTACACACCGGTGAACCATCCACAAGTGGCCTCAAACATTCTATTTGGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACACACCGGTGAACCATCCACAAGTGGCCTCAAACATTCTATTTGGAG  232

seq1  ATGATGGAAACTGTAGAATTTGAGGTCTGATTAGATAAGGTGAGTTTTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGGAAACTGTAGAATTTGAGGTCTGATTAGATAAGGTGAGTTTTGG  282

seq1  AGAACACATCTTTAAAAGTTATACCTTTCTCCTGTCTTGCCCCCTACATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACACATCTTTAAAAGTTATACCTTTCTCCTGTCTTGCCCCCTACATT  332

seq1  TATTTCTACTTATCTTTCTGCTTTCCAGCTGCCATGAGGTAAGCTCTGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCTACTTATCTTTCTGCTTTCCAGCTGCCATGAGGTAAGCTCTGTC  382

seq1  CTGTGCCATATCTGTCACTGTCATGATATTCTCTCTGCCTCACCATAGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGCCATATCTGTCACTGTCATGATATTCTCTCTGCCTCACCATAGGA  432

seq1  CCATTGCAAAGAAGTCAGCCCACTGCATACTGAAAATTGACCCATGTGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTGCAAAGAAGTCAGCCCACTGCATACTGAAAATTGACCCATGTGAG  482

seq1  CCAAAATAAATCTATCCTCTTTAAAGTTGATTTTATCAGCTAGTTTGTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAATAAATCTATCCTCTTTAAAGTTGATTTTATCAGCTAGTTTGTCA  532

seq1  TAGCAACGAAAGTGTCTAACATACATGGGGATTCATTTTAAAGCAATCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAACGAAAGTGTCTAACATACATGGGGATTCATTTTAAAGCAATCTC  582

seq1  CCCAAGACATCATTGTCTTTGATTACCCTTCAGAAAAAAGAATCTAGTGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAGACATCATTGTCTTTGATTACCCTTCAGAAAAAAGAATCTAGTGC  632

seq1  TTCATCATGTGTGAAATTGAATATGTGAAAGTATGCTTTTTAAAAAGCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCATGTGTGAAATTGAATATGTGAAAGTATGCTTTTTAAAAAGCCA  682

seq1  TGGGCATTTATCACAGGGCAGAACCAAGCTGTTAAACTGAGAGGGTTGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCATTTATCACAGGGCAGAACCAAGCTGTTAAACTGAGAGGGTTGTG  732

seq1  AAATTGGTTAACAGACCTATTTTTGATAGCTGAGATGCAGCTCTGTAATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGGTTAACAGACCTATTTTTGATAGCTGAGATGCAGCTCTGTAATG  782

seq1  GATAGGATACAAGGAAACCCCAAGCAAGTGGTCTTTGCTAATGAATGGAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGGATACAAGGAAACCCCAAGCAAGTGGTCTTTGCTAATGAATGGAT  832

seq1  CAAGAACATGAAATGCTCACATTTCTCTCCGTTCCTGTCCTAACTAAAGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAACATGAAATGCTCACATTTCTCTCCGTTCCTGTCCTAACTAAAGA  882

seq1  CATTTTCCCTACAGAAATGACTATTCTGTGTTGTATAAGAAACACCATCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTCCCTACAGAAATGACTATTCTGTGTTGTATAAGAAACACCATCT  932

seq1  TTATTGAATCTAATGTCTTACTGTGGCACTTGACACAATGTCACTTTTGG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGAATCTAATGTCTTACTGTGGCACTTGACACAATGTCACTTTTGG  982

seq1  TTCGAAAGAAAAAATTGAGCCTGAGCAAAAAATACTACATTGATCTTATT  1050
      ||||||||||||||||||||||||||||||||||||||||          
seq2  TTCGAAAGAAAAAATTGAGCCTGAGCAAAAAATACTACATNNNNNNNNNN  1032

seq1  TCATTATTTAGAACTCAGTGGGGAAAGATAGGCCATTCATTGGTCTTAAC  1100
             |||||||||||||||||||||||||||||||||||||||||||
seq2  NNNNNNNTTAGAACTCAGTGGGGAAAGATAGGCCATTCATTGGTCTTAAC  1082

seq1  TGTCAGTGTTGGCACTGAATTC  1122
      ||||||||||||||||||||||
seq2  TGTCAGTGTTGGCACTGAATTC  1104

seq1: chr12_44663380_44663930
seq2: B6Ng01-146K04.g_67_617

seq1  GAATTCAATAAGTTATATTTAGGAATACATACACACACCCACATGCACAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATAAGTTATATTTAGGAATACATACACACACCCACATGCACAC  50

seq1  AACAATTAATGAAAGTGGGGCTACAAAATTGAACACAATTGGAGAGAGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATTAATGAAAGTGGGGCTACAAAATTGAACACAATTGGAGAGAGGT  100

seq1  ATATGGGAAGGTTTAGAAAGAGAAGGGAAGGAAAAATGCAATTGAAATAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGGGAAGGTTTAGAAAGAGAAGGGAAGGAAAAATGCAATTGAAATAC  150

seq1  AGTCTCATATGCCGGGGCCTAGGAAACACAGAAGTGGATGCTCACAGTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTCATATGCCGGGGCCTAGGAAACACAGAAGTGGATGCTCACAGTCA  200

seq1  ACTAGTGGATGGATCACAGGGCTCCCAAGGGAGGAGCTAGAGAAAGTAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGTGGATGGATCACAGGGCTCCCAAGGGAGGAGCTAGAGAAAGTAAG  250

seq1  GAGCTAAAGGGATCTGCAACCCTGTAAGTGGAACAACATTATGAACTAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTAAAGGGATCTGCAACCCTGTAAGTGGAACAACATTATGAACTAAC  300

seq1  AAGTACCCCGGAGCTCTTGACTCTAGCTGCATATGTATCAAAAGATGGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTACCCCGGAGCTCTTGACTCTAGCTGCATATGTATCAAAAGATGGCC  350

seq1  TAGTCGGCCATCACTGGAAAGAGAGGCCCATTGGACACACAAACTTTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCGGCCATCACTGGAAAGAGAGGCCCATTGGACACACAAACTTTTTT  400

seq1  TTTTTTTTGTGAGCTATTGAGTCTTTTTTTTTCCATTTTTATTAGGTATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTGTGAGCTATTGAGTCTTTTTTTTTCCATTTTTATTAGGTATT  450

seq1  TAGCTCATTTACATTTCCAATGCTATACCAAAAGACCCCATACCCACCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTCATTTACATTTCCAATGCTATACCAAAAGACCCCATACCCACCCA  500

seq1  CCCCCACTCCCGTACCCACCCACTCCCCCTATTTGGCCCTGGCGTTCCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCACTCCCGTACCCACCCACTCCCCCTATTTGGCCCTGGCGTTCCCC  550

seq1  T  551
      |
seq2  T  551