BAC Information

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BAC

Clone NameB6Ng01-147E07
Chromosome12 (Build37)
Map Location 20,694,243 - 20,746,116
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100042706, EG668594, EG668600, LOC100042727, LOC673301, EG668605, LOC668614, LOC100042751, LOC100043371, EG668455, LOC100042755, LOC100043377
Downstream geneLOC625810, 1700030C10Rik, 3110053B16Rik, LOC668698, LOC546752, EG629257, Ddef2, Itgb1bp1, Cpsf3, Iah1, Adam17, Ywhaq, LOC100043407, LOC100042796
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-147E07.bB6Ng01-147E07.g
ACCDH944195DH944196
length1,018957
definitionDH944195|Mus musculus domesticus DNA, BAC clone: B6Ng01-147E07, 5' end.DH944196|Mus musculus domesticus DNA, BAC clone: B6Ng01-147E07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(20,694,243 - 20,694,996)(20,745,153 - 20,746,116)
sequence
gaattccttagagactctttatggctaagctgcattccacatcaccagtg
catggcagctgaattaccaagtcacgattgaaggacatctggacagcgct
tatggccattacacacaatcattgtgaacacttacaaaaaggtgtatctg
tgaacacgagtttccatgtctctgggataactgcccgggatcacgatgat
tggaccccacagcatttgtatgctcagctcaattgtttgttttaaaattt
tattcattgacacaagtcccttccggtccactcgagcaccgggatgcctt
gccagcggagtctcccgacacccgcaaggacccacacaggattccccacg
ggatcctaagacctctggtgagtggaacacaacttctgccaggaggcagg
ttcgaacaccggatatctgggcaccttccctgcaagaagagagcttgcct
gcagagaatactctgaccactgaaactaaggagagagctagcctcccagg
tctgcttataaaggctaacagagtcacctgaggaacaaactctaaccaga
gacaactataactgctagcttcagagattaccagatggcaaaaggcaaaa
gtaagaatcctactaacagaaatcaagaccactcaccatcatcagaacgc
agcactcccaccccacctagtcctgggcaccccaacacaaccgaaaatct
agacccaaatttaaatcattgctcatgatgatggtagaggacatcaagaa
ggactttcataactcacttaaagaaatacaggagagcactgctaaagagt
tacaggtccttaaagaaaaacaggaaaacacaaccaaacagttagaagtc
cttaaagaaaaacaggaaaacacatccaaacaggtgatggaaatgaacaa
aaccatactagaactaaaagggaagtagacacataaagaaacccaaagcg
aggtacgctggaaatagaaaccctaggaagatctggaccatagatgcgag
catcagcaacagaataca
ctagtgtctgattccctgtggggggctttctttgtgaaaagcttacagat
tgttttcctgaggctttttgatttgcttggaaaaccaacactagcagcct
gagggttgggcatattccccctagacagcagtggggagccaggcattttg
cccccaaactttccctttcctgttagtgctttaaaaacagggttacattg
cagttctgtttgttccagtactccctctcctctctctcctgacctctccc
actctgcttgggcttcacagccaatgctgatctcactggatgactctgca
ttgcatttttgtgagtcccgcatactagtgccaagaagtaaactcagaag
cagctagctcctgtcctggtcaaagtttcctaggggctcccagcctcctc
agggccatgccctgaaccttcccctgggtagaacccctgagtgttgcaaa
gaaggcccctgcatgggccagacctgtagaaatgtctggttaggcaggct
ctctgggtccctctcagtaattagctggagatgggagcccagcaagtcca
agaccaagggtttgacagagggttgccagctgttcaatgtggtccttgtc
ccttgttccaaaaaagatgacacagtgatccagcctgaagcttttaggaa
caagcagcctccctggaagatgctgctcactactgtgaaccaggaagagc
actgatggcaagccaggagtaaccttcatccttcatgtctcaggggacta
atagcccatataagcaggcttctcccttgtctgaagtctaatcctacaga
tcctttcctggctagtttatgtcaacttaacacagctagagtgatctgag
tggagaaatcctgatttagaaaatgcttccattagatccagctgtaagca
tttcttattgaagaaataaggcaattcataattagatgtgggagggccag
ccaattg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_20694243_20694996
seq2: B6Ng01-147E07.b_48_801

seq1  GAATTCCTTAGAGACTCTTTATGGCTAAGCTGCATTCCACATCACCAGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTAGAGACTCTTTATGGCTAAGCTGCATTCCACATCACCAGTG  50

seq1  CATGGCAGCTGAATTACCAAGTCACGATTGAAGGACATCTGGACAGCGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGCAGCTGAATTACCAAGTCACGATTGAAGGACATCTGGACAGCGCT  100

seq1  TATGGCCATTACACACAATCATTGTGAACACTTACAAAAAGGTGTATCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGCCATTACACACAATCATTGTGAACACTTACAAAAAGGTGTATCTG  150

seq1  TGAACACGAGTTTCCATGTCTCTGGGATAACTGCCCGGGATCACGATGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACACGAGTTTCCATGTCTCTGGGATAACTGCCCGGGATCACGATGAT  200

seq1  TGGACCCCACAGCATTTGTATGCTCAGCTCAATTGTTTGTTTTAAAATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACCCCACAGCATTTGTATGCTCAGCTCAATTGTTTGTTTTAAAATTT  250

seq1  TATTCATTGACACAAGTCCCTTCCGGTCCACTCGAGCACCGGGATGCCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCATTGACACAAGTCCCTTCCGGTCCACTCGAGCACCGGGATGCCTT  300

seq1  GCCAGCGGAGTCTCCCGACACCCGCAAGGACCCACACAGGATTCCCCACG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGCGGAGTCTCCCGACACCCGCAAGGACCCACACAGGATTCCCCACG  350

seq1  GGATCCTAAGACCTCTGGTGAGTGGAACACAACTTCTGCCAGGAGGCAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCCTAAGACCTCTGGTGAGTGGAACACAACTTCTGCCAGGAGGCAGG  400

seq1  TTCGAACACCGGATATCTGGGCACCTTCCCTGCAAGAAGAGAGCTTGCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGAACACCGGATATCTGGGCACCTTCCCTGCAAGAAGAGAGCTTGCCT  450

seq1  GCAGAGAATACTCTGACCACTGAAACTAAGGAGAGAGCTAGCCTCCCAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGAATACTCTGACCACTGAAACTAAGGAGAGAGCTAGCCTCCCAGG  500

seq1  TCTGCTTATAAAGGCTAACAGAGTCACCTGAGGAACAAACTCTAACCAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTTATAAAGGCTAACAGAGTCACCTGAGGAACAAACTCTAACCAGA  550

seq1  GACAACTATAACTGCTAGCTTCAGAGATTACCAGATGGCAAAAGGCAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAACTATAACTGCTAGCTTCAGAGATTACCAGATGGCAAAAGGCAAAA  600

seq1  GTAAGAATCCTACTAACAGAAATCAAGACCACTCACCATCATCAGAACGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGAATCCTACTAACAGAAATCAAGACCACTCACCATCATCAGAACGC  650

seq1  AGCACTCCCACCCCACCTAGTCCTGGGCACCCCAACACAACCGAAAATCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTCCCACCCCACCTAGTCCTGGGCACCCCAACACAACCGAAAATCT  700

seq1  AGACCCAAATTTAAATCATTGCTCATGATGATGGTAGAGGACATCAAGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCCAAATTTAAATCATTGCTCATGATGATGGTAGAGGACATCAAGAA  750

seq1  GGAC  754
      ||||
seq2  GGAC  754

seq1: chr12_20745153_20746116
seq2: B6Ng01-147E07.g_145_1101 (reverse)

seq1  CAATTGGCTGGGCCCTCCCACATCTAATTATGAAATTGCCTTAATTTCTT  50
      ||||||||| |||||||||||||||||||||| ||||||||| |||||||
seq2  CAATTGGCT-GGCCCTCCCACATCTAATTATG-AATTGCCTT-ATTTCTT  47

seq1  CATTAAGAAAATGCCTTACAGCTGGATCTTATGGAAGCATTTTCTAAATC  100
      || |||| ||||| ||||||||||||||| ||||||||||||||||||||
seq2  CAATAAG-AAATG-CTTACAGCTGGATCTAATGGAAGCATTTTCTAAATC  95

seq1  AGGATTTCTCCACTCAGATCACTCTAGCTTGTGTTAAGTTGACATAAAAC  150
      |||||||||||||||||||||||||||| |||||||||||||||| ||||
seq2  AGGATTTCTCCACTCAGATCACTCTAGC-TGTGTTAAGTTGACAT-AAAC  143

seq1  TAGCCAGGAAAGGATCTGTAGGATTAGACTTCAGACAAGGGAGAAGCCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCAGGAAAGGATCTGTAGGATTAGACTTCAGACAAGGGAGAAGCCTG  193

seq1  CTTATATGGGCTATTAGTCCCCTGAGACATGAAGGATGAAGGTTACTCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATATGGGCTATTAGTCCCCTGAGACATGAAGGATGAAGGTTACTCCT  243

seq1  GGCTTGCCATCAGTGCTCTTCCTGGTTCACAGTAGTGAGCAGCATCTTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTGCCATCAGTGCTCTTCCTGGTTCACAGTAGTGAGCAGCATCTTCC  293

seq1  AGGGAGGCTGCTTGTTCCTAAAAGCTTCAGGCTGGATCACTGTGTCATCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGGCTGCTTGTTCCTAAAAGCTTCAGGCTGGATCACTGTGTCATCT  343

seq1  TTTTTGGAACAAGGGACAAGGACCACATTGAACAGCTGGCAACCCTCTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGGAACAAGGGACAAGGACCACATTGAACAGCTGGCAACCCTCTGT  393

seq1  CAAACCCTTGGTCTTGGACTTGCTGGGCTCCCATCTCCAGCTAATTACTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACCCTTGGTCTTGGACTTGCTGGGCTCCCATCTCCAGCTAATTACTG  443

seq1  AGAGGGACCCAGAGAGCCTGCCTAACCAGACATTTCTACAGGTCTGGCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGGACCCAGAGAGCCTGCCTAACCAGACATTTCTACAGGTCTGGCCC  493

seq1  ATGCAGGGGCCTTCTTTGCAACACTCAGGGGTTCTACCCAGGGGAAGGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGGGGCCTTCTTTGCAACACTCAGGGGTTCTACCCAGGGGAAGGTT  543

seq1  CAGGGCATGGCCCTGAGGAGGCTGGGAGCCCCTAGGAAACTTTGACCAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGCATGGCCCTGAGGAGGCTGGGAGCCCCTAGGAAACTTTGACCAGG  593

seq1  ACAGGAGCTAGCTGCTTCTGAGTTTACTTCTTGGCACTAGTATGCGGGAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGAGCTAGCTGCTTCTGAGTTTACTTCTTGGCACTAGTATGCGGGAC  643

seq1  TCACAAAAATGCAATGCAGAGTCATCCAGTGAGATCAGCATTGGCTGTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAAAAATGCAATGCAGAGTCATCCAGTGAGATCAGCATTGGCTGTGA  693

seq1  AGCCCAAGCAGAGTGGGAGAGGTCAGGAGAGAGAGGAGAGGGAGTACTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCAAGCAGAGTGGGAGAGGTCAGGAGAGAGAGGAGAGGGAGTACTGG  743

seq1  AACAAACAGAACTGCAATGTAACCCTGTTTTTAAAGCACTAACAGGAAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAACAGAACTGCAATGTAACCCTGTTTTTAAAGCACTAACAGGAAAG  793

seq1  GGAAAGTTTGGGGGCAAAATGCCTGGCTCCCCACTGCTGTCTAGGGGGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGTTTGGGGGCAAAATGCCTGGCTCCCCACTGCTGTCTAGGGGGAA  843

seq1  TATGCCCAACCCTCAGGCTGCTAGTGTTGGTTTTCCAAGCAAATCAAAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCCCAACCCTCAGGCTGCTAGTGTTGGTTTTCCAAGCAAATCAAAAA  893

seq1  GCCTCAGGAAAACAATCTGTAAGCTTTTCACAAAGAAAGCCCCCCACAGG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCAGGAAAACAATCTGTAAGCTTTTCACAAAGAAAGCCCCCCACAGG  943

seq1  GAATCAGACACTAG  964
      ||||||||||||||
seq2  GAATCAGACACTAG  957