BAC Information

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BAC

Clone NameB6Ng01-148L18
Chromosome12 (Build37)
Map Location 106,145,373 - 106,289,876
singlet/doubletdoublet
Overlap gene4831426I19Rik, Snhg10, Glrx5
Upstream geneSerpina1e, Serpina11, Serpina9, Serpina12, Serpina4-ps1, Serpina5, Serpina3a, Serpina3b, Serpina3c, LOC435318, LOC628883, Serpina3f, LOC667997, Serpina3g, Serpina3h, EG628900, EG238395, Serpina3k, EG628916, Serpina3m, Serpina3n, Gsc, Dicer1, Clmn
Downstream geneLOC100040301, Tcl1b2, Tcl1b1, Tcl1b5, Tcl1b3, Tcl1b4, Tcl1, LOC100040310, 2810011L19Rik, LOC100040339, EG668081, D430019H16Rik, Bdkrb2, Bdkrb1, 2410024A21Rik, 4933433P14Rik, Ak7, Papola, Vrk1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-148L18.bB6Ng01-148L18.g
ACCDH945261DH945262
length768556
definitionDH945261|Mus musculus domesticus DNA, BAC clone: B6Ng01-148L18, 5' end.DH945262|Mus musculus domesticus DNA, BAC clone: B6Ng01-148L18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(106,289,109 - 106,289,876)(106,145,373 - 106,145,934)
sequence
atcctaccttacctaatagaagctggctctgcccagtacccaggctcctc
tcttcgccctctactcttctctataaacctcggtgcttgctgttgctgta
agaaaagcagatgctctttattgcctttgtctctggagcagtctttaaca
ggagctatcaaccatctttcattgtacaggtcaggaaactgaggcccaga
gaacttgagtaacttattcacattaagcagcagccagttttccatccaca
accttcctcccctgtccccagaacaactctcagcccggagagaaaaccag
acactggtctgttacaatgcctgagacataccatgcatttctgatgaaac
tgatatcaaaacccactccctgctccccaatcgtctcagagcaagatctg
cttccatgagaggaaacacagatgtgcttcaggggaaaatgaaaagtggc
ctgatttgcttttcacataaagtgttctaagaaatgtgtcttaatatacc
aactgcagaaagagagccaggtgggagccacctgagcagacgagggctca
ttttggaaccaatggcgccatcttctggtattctatggtatgacaccccg
tgacaccagacccaagcatctcagacacccttgaaatattccattgatct
tctattttggtggatcaaattaaaactatgtaagtattaatccacctaga
attaaactttttaaattttctttttcttttagggttttcttttttccccc
tgagatgggatttctctg
tacatatacaatcacaggcagcaggaagagagacactgagcctggcttgg
gcttctgaaagcccaaagcccacccctagtgacacacttcctccaacaaa
gacacacccaccccaactaggccacgcctatcccaacaaggccacactta
tcccaactaggccactcctaccccaactaggccacacccacctaactagg
ccacacccctaatccttctaagcagtgccattccctgatgactaaccatt
caaatacatgagccaatgggggccctttttatttaacccttcacaggtat
gtttgaggatatgagttaattcgtttattagacagatgttgtgcaaacat
ctgctatgtgttatatttgtgctggtgactggggataaactggtgttggc
atatacttataatcccagcactgggaagtttgaagcaggctgatcagaag
ttcaaagttattcttggctaagttgtgagatggaagatatgtgaaaccca
agaagaggaaggagagaggaacagaaggaagaaagaagaggggaggggag
aggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_106289109_106289876
seq2: B6Ng01-148L18.b_57_824 (reverse)

seq1  CAGAGAAATCCCATCTCAGGGGGAAAAAAGAAAACCCTAAAAGAAAAAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAAATCCCATCTCAGGGGGAAAAAAGAAAACCCTAAAAGAAAAAGA  50

seq1  AAATTTAAAAAGTTTAATTCTAGGTGGATTAATACTTACATAGTTTTAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTAAAAAGTTTAATTCTAGGTGGATTAATACTTACATAGTTTTAAT  100

seq1  TTGATCCACCAAAATAGAAGATCAATGGAATATTTCAAGGGTGTCTGAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATCCACCAAAATAGAAGATCAATGGAATATTTCAAGGGTGTCTGAGA  150

seq1  TGCTTGGGTCTGGTGTCACGGGGTGTCATACCATAGAATACCAGAAGATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGGGTCTGGTGTCACGGGGTGTCATACCATAGAATACCAGAAGATG  200

seq1  GCGCCATTGGTTCCAAAATGAGCCCTCGTCTGCTCAGGTGGCTCCCACCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCCATTGGTTCCAAAATGAGCCCTCGTCTGCTCAGGTGGCTCCCACCT  250

seq1  GGCTCTCTTTCTGCAGTTGGTATATTAAGACACATTTCTTAGAACACTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCTCTTTCTGCAGTTGGTATATTAAGACACATTTCTTAGAACACTTT  300

seq1  ATGTGAAAAGCAAATCAGGCCACTTTTCATTTTCCCCTGAAGCACATCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGAAAAGCAAATCAGGCCACTTTTCATTTTCCCCTGAAGCACATCTG  350

seq1  TGTTTCCTCTCATGGAAGCAGATCTTGCTCTGAGACGATTGGGGAGCAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCCTCTCATGGAAGCAGATCTTGCTCTGAGACGATTGGGGAGCAGG  400

seq1  GAGTGGGTTTTGATATCAGTTTCATCAGAAATGCATGGTATGTCTCAGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGGGTTTTGATATCAGTTTCATCAGAAATGCATGGTATGTCTCAGGC  450

seq1  ATTGTAACAGACCAGTGTCTGGTTTTCTCTCCGGGCTGAGAGTTGTTCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTAACAGACCAGTGTCTGGTTTTCTCTCCGGGCTGAGAGTTGTTCTG  500

seq1  GGGACAGGGGAGGAAGGTTGTGGATGGAAAACTGGCTGCTGCTTAATGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACAGGGGAGGAAGGTTGTGGATGGAAAACTGGCTGCTGCTTAATGTG  550

seq1  AATAAGTTACTCAAGTTCTCTGGGCCTCAGTTTCCTGACCTGTACAATGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGTTACTCAAGTTCTCTGGGCCTCAGTTTCCTGACCTGTACAATGA  600

seq1  AAGATGGTTGATAGCTCCTGTTAAAGACTGCTCCAGAGACAAAGGCAATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGGTTGATAGCTCCTGTTAAAGACTGCTCCAGAGACAAAGGCAATA  650

seq1  AAGAGCATCTGCTTTTCTTACAGCAACAGCAAGCACCGAGGTTTATAGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGCATCTGCTTTTCTTACAGCAACAGCAAGCACCGAGGTTTATAGAG  700

seq1  AAGAGTAGAGGGCGAAGAGAGGAGCCTGGGTACTGGGCAGAGCCAGCTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTAGAGGGCGAAGAGAGGAGCCTGGGTACTGGGCAGAGCCAGCTTC  750

seq1  TATTAGGTAAGGTAGGAT  768
      ||||||||||||||||||
seq2  TATTAGGTAAGGTAGGAT  768

seq1: chr12_106145373_106145934
seq2: B6Ng01-148L18.g_70_631

seq1  GAATTCTACATATACAATCACAGGCAGCAGGAAGAGAGACACTGAGCCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACATATACAATCACAGGCAGCAGGAAGAGAGACACTGAGCCTG  50

seq1  GCTTGGGCTTCTGAAAGCCCAAAGCCCACCCCTAGTGACACACTTCCTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGGGCTTCTGAAAGCCCAAAGCCCACCCCTAGTGACACACTTCCTCC  100

seq1  AACAAAGACACACCCACCCCAACTAGGCCACGCCTATCCCAACAAGGCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAGACACACCCACCCCAACTAGGCCACGCCTATCCCAACAAGGCCA  150

seq1  CACTTATCCCAACTAGGCCACTCCTACCCCAACTAGGCCACACCCACCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTATCCCAACTAGGCCACTCCTACCCCAACTAGGCCACACCCACCTA  200

seq1  ACTAGGCCACACCCCTAATCCTTCTAAGCAGTGCCATTCCCTGATGACTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGGCCACACCCCTAATCCTTCTAAGCAGTGCCATTCCCTGATGACTA  250

seq1  ACCATTCAAATACATGAGCCAATGGGGGCCCTTTTTATTTAACCCTTCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATTCAAATACATGAGCCAATGGGGGCCCTTTTTATTTAACCCTTCAC  300

seq1  AGGTATGTTTGAGGATATGAGTTAATTCGTTTATTAGACAGATGTTGTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTATGTTTGAGGATATGAGTTAATTCGTTTATTAGACAGATGTTGTGC  350

seq1  AAACATCTGCTATGTGTTATATTTGTGCTGGTGACTGGGGATAAACTGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATCTGCTATGTGTTATATTTGTGCTGGTGACTGGGGATAAACTGGT  400

seq1  GTTGGCATATACTTATAATCCCAGCACTGGGAAGTTTGAAGCAGGCTGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGCATATACTTATAATCCCAGCACTGGGAAGTTTGAAGCAGGCTGAT  450

seq1  CAGAAGTTCAAAGTTATTCTTGGCTAAGTTGTGAGATGGAAGATATGTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGTTCAAAGTTATTCTTGGCTAAGTTGTGAGATGGAAGATATGTGA  500

seq1  AACCCAAGAAGAGGAAGGAGAGAGGAACAGAAGGAAGAAAGAAGAGGGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCAAGAAGAGGAAGGAGAGAGGAACAGAAGGAAGAAAGAAGAGGGGA  550

seq1  GGGGAGAGGGGG  562
      ||||||||||||
seq2  GGGGAGAGGGGG  562