BAC Information

Click to search

BAC

Clone NameB6Ng01-148O04
Chromosome12 (Build37)
Map Location 90,783,429 - 90,940,036
singlet/doubletdoublet
Overlap geneNrxn3
Upstream geneLOC100039261, EG666915
Downstream geneLOC100039498, LOC100039287
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-148O04.bB6Ng01-148O04.g
ACCDH945373DH945374
length1,108562
definitionDH945373|Mus musculus domesticus DNA, BAC clone: B6Ng01-148O04, 5' end.DH945374|Mus musculus domesticus DNA, BAC clone: B6Ng01-148O04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(90,783,429 - 90,784,548)(90,939,468 - 90,940,036)
sequence
gaattcttgatatgtgaggtataattttatctctgagaaaggatttaggc
agggagatgtcaactggaatttatttatgctgaagcataagccttctttc
gtctccgctgacctacaattcccaattggcccctctatgctgccactcag
gtatagcatagagttaactctcacatcagcaccttggttctgggacagct
gggaaagatgtgctgtcggaaagaaacaactcttaggaaaataatatgta
tataaagaatgcactgaaacaaatgaagttagctagataaactctcagaa
gtgttaacggcttcatcccaattcctacaaaacaccccacatatttccaa
catctaacttatttaatttgcatttggattaatttagcatattttcttat
tatctaacacttaatgaacagtaaacacagctataaccaaatttcacagc
tatttctcagtgtggggtaacattttgcatttagttatatttggtttcct
aggtaatctgtgattagagctatattttctaaatcttgtctcctgtcaca
tagaatattttggtggtggattcttcatgcctatgacaatggaggaagga
gaacactgctttgaagcgatgacatcgtgaaaaccaactagtcaacaaag
ggtgctttagggtagtcttcactgctgttattcattgttggtctccatgc
ttttatttctgaaacccaccctgttttccagttcttggtaaatcatcccc
caaaaccaattatgagttttacagctttcattcaaggacagctaaagggc
ctcctctttaatgtaggacagtctccacacttgaatttcaaggtcgtcta
tgatcttttaaaaaacagccttctcccctttaatattaataggctgttct
gtcctcagggaaagtcagctccttcactgtcccagccctggtctgtggtc
attatactccatctctcactgctttagtctgtccccttctctgaacccca
agcactctgcacagtctccctactccctgatcctctctactctcaacatc
aaatgatctctctcccatatctactgcgattttgtcataatctatagcag
ctagctga
aaggccagcctggtgaccatagttctaggatagccagggctacacagaaa
aaccctgcttgaaaaacttacaaacaaacaaacaaacaaacaaaagtcaa
aagaaatgaggaagaaaaaaaagagaagggagggaggagaggagggtggg
aagaatggagagaaaagaaaagaaagtgagacatgagaacaacggaggag
atgtggtgttctttattctgtcagcttgaacttcaaaataaagcccattc
tgccagagatagtgtgtacagctaaaactgtagcatcctcttcccactct
ggacaaacctcgcttgcagacagccatctggctctgtgcccaattcatca
actcaccaagtgctttccaacctcagcaatcttttgtttcagcaatcttt
tctgacaggaacattcctccccggatctgtgaagagctgccatcttctag
ccatccctgtctctgtttaactgtcttctctaacatgagcttggtctttc
tgatgttcagacacagtacatggtttctttgttcattggctctttcctgt
tccctaaactaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_90783429_90784548
seq2: B6Ng01-148O04.b_45_1152

seq1  GAATTCTTGATATGTGAGGTATAATTTTATCTCTGAGAAAGGATTTAGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGATATGTGAGGTATAATTTTATCTCTGAGAAAGGATTTAGGC  50

seq1  AGGGAGATGTCAACTGGAATTTATTTATGCTGAAGCATAAGCCTTCTTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGATGTCAACTGGAATTTATTTATGCTGAAGCATAAGCCTTCTTTC  100

seq1  GTCTCCGCTGACCTACAATTCCCAATTGGCCCCTCTATGCTGCCACTCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCCGCTGACCTACAATTCCCAATTGGCCCCTCTATGCTGCCACTCAG  150

seq1  GTATAGCATAGAGTTAACTCTCACATCAGCACCTTGGTTCTGGGACAGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAGCATAGAGTTAACTCTCACATCAGCACCTTGGTTCTGGGACAGCT  200

seq1  GGGAAAGATGTGCTGTCGGAAAGAAACAACTCTTAGGAAAATAATATGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAAGATGTGCTGTCGGAAAGAAACAACTCTTAGGAAAATAATATGTA  250

seq1  TATAAAGAATGCACTGAAACAAATGAAGTTAGCTAGATAAACTCTCAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAGAATGCACTGAAACAAATGAAGTTAGCTAGATAAACTCTCAGAA  300

seq1  GTGTTAACGGCTTCATCCCAATTCCTACAAAACACCCCACATATTTCCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTAACGGCTTCATCCCAATTCCTACAAAACACCCCACATATTTCCAA  350

seq1  CATCTAACTTATTTAATTTGCATTTGGATTAATTTAGCATATTTTCTTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTAACTTATTTAATTTGCATTTGGATTAATTTAGCATATTTTCTTAT  400

seq1  TATCTAACACTTAATGAACAGTAAACACAGCTATAACCAAATTTCACAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTAACACTTAATGAACAGTAAACACAGCTATAACCAAATTTCACAGC  450

seq1  TATTTCTCAGTGTGGGGTAACATTTTGCATTTAGTTATATTTGGTTTCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCTCAGTGTGGGGTAACATTTTGCATTTAGTTATATTTGGTTTCCT  500

seq1  AGGTAATCTGTGATTAGAGCTATATTTTCTAAATCTTGTCTCCTGTCACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAATCTGTGATTAGAGCTATATTTTCTAAATCTTGTCTCCTGTCACA  550

seq1  TAGAATATTTTGGTGGTGGATTCTTCATGCCTATGACAATGGAGGAAGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATATTTTGGTGGTGGATTCTTCATGCCTATGACAATGGAGGAAGGA  600

seq1  GAACACTGCTTTGAAGCGATGACATCGTGAAAACCAACTAGTCAACAAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACACTGCTTTGAAGCGATGACATCGTGAAAACCAACTAGTCAACAAAG  650

seq1  GGTGCTTTAGGGTAGTCTTCACTGCTGTTATTCATTGTTGGTCTCCATGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCTTTAGGGTAGTCTTCACTGCTGTTATTCATTGTTGGTCTCCATGC  700

seq1  TTTTATTTCTGAAACCCACCCTGTTTTCCAGTTCTTGGTAAATCATCCCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTTCTGAAACCCACCCTGTTTTCCAGTTCTTGGTAAATCATCCCC  750

seq1  CAAAACCAATTATGAGTTTTACAGCTTTCATTCAAGGACAGCT-AAGGGC  799
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CAAAACCAATTATGAGTTTTACAGCTTTCATTCAAGGACAGCTAAAGGGC  800

seq1  CTCCTCTTTAATGTAGGACAGTCTCCACACTTGAATTTCAAGGTCGTCTA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCTTTAATGTAGGACAGTCTCCACACTTGAATTTCAAGGTCGTCTA  850

seq1  TGATCTTTTAAAAAACAGCCTTCTCCCCTTTAATATTAATAGGCTGTTCT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCTTTTAAAAAACAGCCTTCTCCCCTTTAATATTAATAGGCTGTTCT  900

seq1  GTCCTCAGGGAAAGTCAGCTCCTTCACTGTCCCCAGCCCTGGTCTGTGGT  949
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  GTCCTCAGGGAAAGTCAGCTCCTTCACTGT-CCCAGCCCTGGTCTGTGGT  949

seq1  CATTATACTCCATCTCCTCACTGCTTTAGTCTGTCCCCTTCTCTGAACCC  999
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CATTATACTCCATCT-CTCACTGCTTTAGTCTGTCCCCTTCTCTGAACCC  998

seq1  CAAGCACTCTGCACAAGTCTCCCCTACTCCCCTGAATCCTCTCTTACTTC  1049
      |||||||||||||| ||||| ||||||| ||||| |||||||| ||| ||
seq2  CAAGCACTCTGCAC-AGTCT-CCCTACT-CCCTG-ATCCTCTC-TAC-TC  1042

seq1  TC-ACATCCACATTGATCTCTCCTCCCATATCTACTGCGATTTTTGTCAT  1098
      || |||||   | |||||||| |||||||||||||||||| |||||||||
seq2  TCAACATC--AAATGATCTCT-CTCCCATATCTACTGCGA-TTTTGTCAT  1088

seq1  AAATCTATAGCAGCTAGGCTGA  1120
       ||||||||||||||| |||||
seq2  -AATCTATAGCAGCTA-GCTGA  1108

seq1: chr12_90939468_90940036
seq2: B6Ng01-148O04.g_65_632 (reverse)

seq1  TTAGTTTAGGGAACAGGAAAGAGCCAATGAACAAAGAAACCATGTACTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTTAGGGAACAGGAAAGAGCCAATGAACAAAGAAACCATGTACTGT  50

seq1  GTCTGAACATCAGAAAGACCAAGCTCATGTTTAGAGAAGACAGTTAAACA  100
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GTCTGAACATCAGAAAGACCAAGCTCATG-TTAGAGAAGACAGTTAAACA  99

seq1  GAGACAGGGATGGCTAGAAGATGGCAGCTCTTCACAGATCCGGGGAGGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACAGGGATGGCTAGAAGATGGCAGCTCTTCACAGATCCGGGGAGGAA  149

seq1  TGTTCCTGTCAGAAAAGATTGCTGAAACAAAAGATTGCTGAGGTTGGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCTGTCAGAAAAGATTGCTGAAACAAAAGATTGCTGAGGTTGGAAA  199

seq1  GCACTTGGTGAGTTGATGAATTGGGCACAGAGCCAGATGGCTGTCTGCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTTGGTGAGTTGATGAATTGGGCACAGAGCCAGATGGCTGTCTGCAA  249

seq1  GCGAGGTTTGTCCAGAGTGGGAAGAGGATGCTACAGTTTTAGCTGTACAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGAGGTTTGTCCAGAGTGGGAAGAGGATGCTACAGTTTTAGCTGTACAC  299

seq1  ACTATCTCTGGCAGAATGGGCTTTATTTTGAAGTTCAAGCTGACAGAATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATCTCTGGCAGAATGGGCTTTATTTTGAAGTTCAAGCTGACAGAATA  349

seq1  AAGAACACCACATCTCCTCCGTTGTTCTCATGTCTCACTTTCTTTTCTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACACCACATCTCCTCCGTTGTTCTCATGTCTCACTTTCTTTTCTTT  399

seq1  TCTCTCCATTCTTCCCACCCTCCTCTCCTCCCTCCCTTCTCTTTTTTTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCCATTCTTCCCACCCTCCTCTCCTCCCTCCCTTCTCTTTTTTTTC  449

seq1  TTCCTCATTTCTTTTGACTTTTGTTTGTTTGTTTGTTTGTTTGTAAGTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCATTTCTTTTGACTTTTGTTTGTTTGTTTGTTTGTTTGTAAGTTT  499

seq1  TTCAAGCAGGGTTTTTCTGTGTAGCCCTGGCTATCCTAGAACTATGGTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGCAGGGTTTTTCTGTGTAGCCCTGGCTATCCTAGAACTATGGTCA  549

seq1  CCAGGCTGGCCTTGAATTC  569
      |||||||||||||||||||
seq2  CCAGGCTGGCCTTGAATTC  568