BAC Information

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BAC

Clone NameB6Ng01-148P17
Chromosome12 (Build37)
Map Location 32,274,291 - 32,436,997
singlet/doubletdoublet
Overlap geneBcap29, Dus4l, LOC100043081, Gpr22
Upstream geneTmem18, LOC100043055, Acp1, Sh3yl1, LOC629656, 9030611O19Rik, LOC668781, LOC100043065, LOC100043514, EG629667, LOC100043068, Lamb1-1, Dld, LOC668786, Slc26a3, Cbll1, Slc26a4, LOC100043531
Downstream geneHbp1, Prkar2b, Pik3cg, 2010109K11Rik, LOC100043548
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-148P17.bB6Ng01-148P17.g
ACCDH945443DH945444
length1,127953
definitionDH945443|Mus musculus domesticus DNA, BAC clone: B6Ng01-148P17, 5' end.DH945444|Mus musculus domesticus DNA, BAC clone: B6Ng01-148P17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,274,291 - 32,275,437)(32,436,045 - 32,436,997)
sequence
gaattctcactacagtatactctggcatgtgcatacctacacacacacac
acacacacacacacacacacacaaacacaaacacacagttgcatgcacat
acatataaagaaaaataagtgtagtaaatattgaaaaacaaattaataat
tacaaatgaatttagcattcaaataactttgtgccataatggcctactga
ttgtgttcacctccaattctttagaacctgaattttaagttacatggtat
ggtgatttgaatgagaacactaagacaaaagttggtaccaagcagcaggg
tattgctgtgtcaagcccaaccatactgccttttggcagaatgtgaattt
tggattaagaaagcagtttaatacttaagtgtggcttaatgggacatact
tgtagtagcagggaagacaatggtattgagagctggcctagttcaagagg
tttcagaggagaagaatattaataagtgacctaaaaaccatacttgtaat
attttggcaaaaaaaatgtggctactttctgccattgacttaagaatgtg
cctgaattgaagactgctggattaatggcactggtagtagaaatttcaag
acagcctaatattgactgtgaaatatggttatcagtgatcattcttatgc
agctgaggaaggaaaaatatgagatgtatagtttgaggagaaaaggagta
tcaagaagtgtaactgtggaaggaggcagaaaatttcagggagagaatgc
ttcaaaggctgctttattgttggctaagatggagagagtcaaggccttcg
gggtagcctggcttagcctgataagacgaattttggactcctgaccttaa
gaatgtcaagataaatgtatttatgtctgttttgaatcactaagtttggg
ggtatctatgacacaataagaaagaatatgcttattataaatcaaaagtg
cattcagtttcagtgtattgcattaaccttgctttctgttttcacctcta
ggaagatttacgtggagcagtgagtctaagcttcatcctgatacaaacat
ccctttgggtgctaagactaaggaaggcagattgcatcagaagattttta
tacatgcccttaaagagacttggaagt
gaattctttctattaaagtagctgggtcaaattcactcaatctcacctag
gagccctagatgatgaataaggaaatctgtaaacacgagatggtagcttc
acataaaggtaagtaccaccaactgcccacagtcacagaggcaaggaaag
tacttacgccatttctaacttctacttgctccatgtactttctttttttt
aaagatttgtttgtttgtttgtttgtttattaattatatgtaagtacact
gtagctgtcttcagaggcaccagaagagggcatcagatctcattatgggt
ggttgtgagccaccatgtggttgctgggatttgaacttcggaccttcaga
agagcagtcgggtgctcttacccactgagccatctcaccagcccgctcca
tgtactttcagttctgcactgtggtaataaggagtcagtttgacatccct
acccacaatcagatgtgatgaacactttcagcaaataagcaggacacaaa
actaatgtacaaaactcggtagtttatctattaatcattaaagaacgtac
tgaggaaaaaaatcggagggaaaatgacttgcaataccatcaaatgaacc
aataaaacaaaaactttaaacatagtaaacataataaacttaaccaagga
tgtgaaaaacctctataatgaaaacttgaaagcactttagaaaaaaacta
gagaagacactagaagatgggaaacttctgctattcatggataggaaaaa
ttaatattgtgaaaaggctacattaccaaaagagttaaacaatctcaatg
caatctttcacacaacaaacaaacaaacaaaaaaaaatcctaaaattcac
atgtagcacaaaagaccaaacaattcttggggagaaagaagcacaacagg
atcatattttctatactataccagccgtagaaacaaaatagcaaggtaac
tgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_32274291_32275437
seq2: B6Ng01-148P17.b_49_1175

seq1  GAATTCTCACTACAGTATACTCTGGCATGTGCATACCTACACACACACAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCACTACAGTATACTCTGGCATGTGCATACCTACACACACACAC  50

seq1  ACACACACACACACACACACACAAACACAAACACACAGTTGCATGCACAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACAAACACAAACACACAGTTGCATGCACAT  100

seq1  ACATATAAAGAAAAATAAGTGTAGTAAATATTGAAAAACAAATTAATAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATAAAGAAAAATAAGTGTAGTAAATATTGAAAAACAAATTAATAAT  150

seq1  TACAAATGAATTTAGCATTCAAATAACTTTGTGCCATAATGGCCTACTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAATGAATTTAGCATTCAAATAACTTTGTGCCATAATGGCCTACTGA  200

seq1  TTGTGTTCACCTCCAATTCTTTAGAACCTGAATTTTAAGTTACATGGTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTTCACCTCCAATTCTTTAGAACCTGAATTTTAAGTTACATGGTAT  250

seq1  GGTGATTTGAATGAGAACACTAAGACAAAAGTTGGTACCAAGCAGCAGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGATTTGAATGAGAACACTAAGACAAAAGTTGGTACCAAGCAGCAGGG  300

seq1  TATTGCTGTGTCAAGCCCAACCATACTGCCTTTTGGCAGAATGTGAATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGCTGTGTCAAGCCCAACCATACTGCCTTTTGGCAGAATGTGAATTT  350

seq1  TGGATTAAGAAAGCAGTTTAATACTTAAGTGTGGCTTAATGGGACATACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATTAAGAAAGCAGTTTAATACTTAAGTGTGGCTTAATGGGACATACT  400

seq1  TGTAGTAGCAGGGAAGACAATGGTATTGAGAGCTGGCCTAGTTCAAGAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGTAGCAGGGAAGACAATGGTATTGAGAGCTGGCCTAGTTCAAGAGG  450

seq1  TTTCAGAGGAGAAGAATATTAATAAGTGACCTAAAAACCATACTTGTAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGAGGAGAAGAATATTAATAAGTGACCTAAAAACCATACTTGTAAT  500

seq1  ATTTTGGCAAAAAAAATGTGGCTACTTTCTGCCATTGACTTAAGAATGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGGCAAAAAAAATGTGGCTACTTTCTGCCATTGACTTAAGAATGTG  550

seq1  CCTGAATTGAAGACTGCTGGATTAATGGCACTGGTAGTAGAAATTTCAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAATTGAAGACTGCTGGATTAATGGCACTGGTAGTAGAAATTTCAAG  600

seq1  ACAGCCTAATATTGACTGTGAAATATGGTTATCAGTGATCATTCTTATGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCCTAATATTGACTGTGAAATATGGTTATCAGTGATCATTCTTATGC  650

seq1  AGCTGAGGAAGGAAAAATATGAGATGTATAGTTTGAGGAGAAAAGGAGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGAGGAAGGAAAAATATGAGATGTATAGTTTGAGGAGAAAAGGAGTA  700

seq1  TCAAGAAGTGTAACTGTGGAAGGAGGCAGAAAATTTCAGGGAGAGAATGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGAAGTGTAACTGTGGAAGGAGGCAGAAAATTTCAGGGAGAGAATGC  750

seq1  TTCAAAGGCTGCTTTATTGTTGGCTAAGATGGAGAGAGTCAAGGCCTTCG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAGGCTGCTTTATTGTTGGCTAAGATGGAGAGAGTCAAGGCCTTCG  800

seq1  GGGTAGCCTGGCTTAGCCTGATAAGACGAATTTTGGACTCCTGACCTTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTAGCCTGGCTTAGCCTGATAAGACGAATTTTGGACTCCTGACCTTAA  850

seq1  GAATGTCAAGATAAATGTATTTATGTCTGTTTTGAATCACTAAGTTTGGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTCAAGATAAATGTATTTATGTCTGTTTTGAATCACTAAGTTTGGG  900

seq1  GGTATCTATGACAACAATAAGAAAGAAATATGCTTATTATAAATCAAAAG  950
      |||||||||||| |||||||||||| ||||||||||||||||||||||||
seq2  GGTATCTATGAC-ACAATAAGAAAG-AATATGCTTATTATAAATCAAAAG  948

seq1  TGCATTTCAGGTTTTCAGTGTTATTGCATTAACCTTGCTTTCCTGTTTTC  1000
      |||| |||||  |||||||| |||||||||||||||||||| ||||||| 
seq2  TGCA-TTCAG--TTTCAGTG-TATTGCATTAACCTTGCTTT-CTGTTTT-  992

seq1  CACCTCTAGGAAGATTTACGTGGAGGCAGTGAAGTCTAAGCTTCATCCTG  1050
      |||||||||||||||||||||||| |||||| ||||||||||||||||| 
seq2  CACCTCTAGGAAGATTTACGTGGA-GCAGTG-AGTCTAAGCTTCATCCT-  1039

seq1  GATACAAACATCCCTTTGGGTGCTAAAGACATAAAGGGGAAGCCAGATTG  1100
      |||||||||||||||||||||||| ||||| |||   ||||| |||||||
seq2  GATACAAACATCCCTTTGGGTGCT-AAGAC-TAA---GGAAGGCAGATTG  1084

seq1  CAACCAGGAAAGATTTTTTATTACATGCCCTAAAAGA-TCTTGGAAGT  1147
      | | |||  |||||||||   |||||||||| |||||  |||||||||
seq2  C-ATCAG--AAGATTTTT--ATACATGCCCTTAAAGAGACTTGGAAGT  1127

seq1: chr12_32436045_32436997
seq2: B6Ng01-148P17.g_65_1017 (reverse)

seq1  CCAG-TACCTTGCTATTTTTGTTTCTACGGCT-GTATAGTATAGAAATTA  48
      |||| |||||||||| |||||||||||||||| |||||||||||||| ||
seq2  CCAGTTACCTTGCTA-TTTTGTTTCTACGGCTGGTATAGTATAGAAAATA  49

seq1  TGATCCTGTTGTTGCTCTTTCTCCCC-AGAATTGTTTTGGTCTTTTGTGC  97
      ||||||||||||   ||||||||||| ||||||| |||||||||||||||
seq2  TGATCCTGTTGTGCTTCTTTCTCCCCAAGAATTG-TTTGGTCTTTTGTGC  98

seq1  TCCCATGTGAATTTTAGGATTTTTTTTTGTTTGTTTGTTTGTTGTGTGAA  147
      |  |||||||||||||||||||||||||||||||||||||||||||||||
seq2  T-ACATGTGAATTTTAGGATTTTTTTTTGTTTGTTTGTTTGTTGTGTGAA  147

seq1  AGATTGCATTGAGATTGTTTAACTCTTTTGGTAATGTAGCCTTTTCACAG  197
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AGATTGCATTGAGATTGTTTAACTCTTTTGGTAATGTAGCCTTTTCACAA  197

seq1  TATTAATTTTTCCTATCCATGAATAGCAGAAGTTTCCCATCTTCTAGTGT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAATTTTTCCTATCCATGAATAGCAGAAGTTTCCCATCTTCTAGTGT  247

seq1  CTTCTCTAGTTTTTTTCTAAAGTGCTTTCAAGTTTTCATTATAGAGGTTT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCTAGTTTTTTTCTAAAGTGCTTTCAAGTTTTCATTATAGAGGTTT  297

seq1  TTCACATCCTTGGTTAAGTTTATTATGTTTACTATGTTTAAAGTTTTTGT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACATCCTTGGTTAAGTTTATTATGTTTACTATGTTTAAAGTTTTTGT  347

seq1  TTTATTGGTTCATTTGATGGTATTGCAAGTCATTTTCCCTCCGATTTTTT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTGGTTCATTTGATGGTATTGCAAGTCATTTTCCCTCCGATTTTTT  397

seq1  TCCTCAGTACGTTCTTTAATGATTAATAGATAAACTACCGAGTTTTGTAC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCAGTACGTTCTTTAATGATTAATAGATAAACTACCGAGTTTTGTAC  447

seq1  ATTAGTTTTGTGTCCTGCTTATTTGCTGAAAGTGTTCATCACATCTGATT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGTTTTGTGTCCTGCTTATTTGCTGAAAGTGTTCATCACATCTGATT  497

seq1  GTGGGTAGGGATGTCAAACTGACTCCTTATTACCACAGTGCAGAACTGAA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGTAGGGATGTCAAACTGACTCCTTATTACCACAGTGCAGAACTGAA  547

seq1  AGTACATGGAGCGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGAC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACATGGAGCGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGAC  597

seq1  TGCTCTTCTGAAGGTCCGAAGTTCAAATCCCAGCAACCACATGGTGGCTC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTTCTGAAGGTCCGAAGTTCAAATCCCAGCAACCACATGGTGGCTC  647

seq1  ACAACCACCCATAATGAGATCTGATGCCCTCTTCTGGTGCCTCTGAAGAC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACCACCCATAATGAGATCTGATGCCCTCTTCTGGTGCCTCTGAAGAC  697

seq1  AGCTACAGTGTACTTACATATAATTAATAAACAAACAAACAAACAAACAA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTACAGTGTACTTACATATAATTAATAAACAAACAAACAAACAAACAA  747

seq1  ATCTTTAAAAAAAAGAAAGTACATGGAGCAAGTAGAAGTTAGAAATGGCG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTAAAAAAAAGAAAGTACATGGAGCAAGTAGAAGTTAGAAATGGCG  797

seq1  TAAGTACTTTCCTTGCCTCTGTGACTGTGGGCAGTTGGTGGTACTTACCT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTACTTTCCTTGCCTCTGTGACTGTGGGCAGTTGGTGGTACTTACCT  847

seq1  TTATGTGAAGCTACCATCTCGTGTTTACAGATTTCCTTATTCATCATCTA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTGAAGCTACCATCTCGTGTTTACAGATTTCCTTATTCATCATCTA  897

seq1  GGGCTCCTAGGTGAGATTGAGTGAATTTGACCCAGCTACTTTAATAGAAA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTCCTAGGTGAGATTGAGTGAATTTGACCCAGCTACTTTAATAGAAA  947

seq1  GAATTC  953
      ||||||
seq2  GAATTC  953