BAC Information

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BAC

Clone NameB6Ng01-149B17
Chromosome12 (Build37)
Map Location 38,359,229 - 38,360,411
singlet/doubletsinglet
Overlap genenone
Upstream geneMeox2, A530016O06Rik
Downstream geneLOC100043139, Dgkb
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-149B17.bB6Ng01-149B17.g
ACCDH945535DH945536
length1,1641,219
definitionDH945535|Mus musculus domesticus DNA, BAC clone: B6Ng01-149B17, 5' end.DH945536|Mus musculus domesticus DNA, BAC clone: B6Ng01-149B17, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctaacaagggttgtctggaatagcagccagggcttttaaccacta
agcccctgctctaaccccagcttaaattttaaaagcaaaaaattaagaac
agagaataagcaaaaaataaaaaaggacatcttcaaaggtaaataacaca
agttatcaagtgcgaaacatctgtgggttttcttgtaaagtctgtaaaat
taattcttccagctgatggtctttgtgggcaggttgtctgcagagagatt
ataaagtttaaaatatcttgtctatagattccaagtctaacctgagaaat
gttgtgagaccttgcttcaaaatgacaaaataagaggaggtcttggtgtg
tttatttcactagcaattgtagaagtcttttctaactaggaggccatttc
ttaaatgctggtgagaaaacctctccaatatacataattttgaaatgagt
agcataatttgaaagaaaataaatgttttctacagataagacacatttct
agagataatgtgtagtatcagaaactacatagttgaaagttagagactgt
aggcacatatcaatggacaatgtttttcgatccatgactttatgtccaac
tgatagagttgataactgagtgtggaatttgaagaaataaatcatccccc
cagccatgcagaatcagagcaagtttgcattctataaagtctgtgtcgtt
ggtggtttcagaagggtaatttagcaagccatggagttaacccaggcaga
aaggcaggcatgaaactcttaaaacagaggccctaagagaatttcagttc
gtggatatcactgtatgacatctgtgagacagatctggaaagcatccgga
ttgagggcgaggaagggggaggattctggcaaagaaaagcttagcaaaag
tgaacagtgtacaccaaggcaattagagaatcctgcatgcacagaaacaa
agatgatactattaaattcagaatctggagagtaaataaagaagtatata
taagcatttgtgactggccagtaaactagttctgacagaagcatttaggg
actagtatttattggacctcatgttgaaacacttacatccatcatgcagg
ggtgatatgcatgtggtgcagtacagatcataagggtagagcagatgctc
ctcagcagttacaa
gaattccacataaaaccagagacactgaaacttatagagacaaacgtgag
gaagagccttgaaggtattggcacattggaaaaattcctgaacacaacac
caatgacttgtgctgtaagatcgaaaattgacaaatgggacctcaagaaa
attcaaaacttctgtaaggcaaagacagtgtcaataagacaaaaatgcaa
ccaatagattgggaaaggatcttcaacaaccctaaatctgataggggact
aatatccaagatatacaaagaactcaagaagtaagactcaagagaaccaa
ataaccctattaaaaatggggtaccaagctaaacaaagaattctcaactg
aagaatactgaatggctgaaaaacacctgaaaaagttcaacatccttagt
catcagggaaatgcaaatcaaaacaaccctgtgattctaccttaccccag
tcagaaaggctaagatcaaaacctcaggtgacagcagatgctggggagga
tgtggataaagaggaacactcctccattgctggtgggattgcaaactgga
ataaccactctggaaatcagtctggcagttcttctgaaaattggacctaa
tactactgaaagatccagcaattccactcttgggcatatacccagaaaat
gttccaacttgtaataaggacacatgctccactattttcatagcagcctt
atttataatagccagaagctggaaagaacccagatgtaccttatcagagg
aatggatatagaaaatgtggtacatttacacaatagagtatatacagcta
ttaaaaacaatgaatttatgaaattcctagacaaatagatgggaggtgga
gaatataatcctaaatgaggtaaccaatcacaaaagaacacacatgatat
gcactcactgataagttgatattagcccagaaagctcagaacactcaaga
tacatttgcaaaacagatgaaaattatgaggagacaaagtgtatatactt
cgattcttcttagaaagggggaacaaatacccattgagggaatacagaga
caagtcgagattgagtattacatcagaagtggtcccacctgagatcattc
ataaacactacgaaccagacctatgcgaagcacaagagcctgctaagact
gaactggcgatcctggagaaggcttgtcatggtctggacaaaatatagag
agtgatgagtgtctactca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_38359229_38360411
seq2: B6Ng01-149B17.b_46_1209

seq1  GAATTCTAACAAGGGTTGTCTGGAATAGCAGCCAGGGCTTTTAACCACTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAACAAGGGTTGTCTGGAATAGCAGCCAGGGCTTTTAACCACTA  50

seq1  AGCCCCTGCTCTAACCCCAGCTTAAATTTTAAAAGCAAAAAATTAAGAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCCTGCTCTAACCCCAGCTTAAATTTTAAAAGCAAAAAATTAAGAAC  100

seq1  AGAGAATAAGCAAAAAATAAAAAAGGACATCTTCAAAGGTAAATAACACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAATAAGCAAAAAATAAAAAAGGACATCTTCAAAGGTAAATAACACA  150

seq1  AGTTATCAAGTGCGAAACATCTGTGGGTTTTCTTGTAAAGTCTGTAAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTATCAAGTGCGAAACATCTGTGGGTTTTCTTGTAAAGTCTGTAAAAT  200

seq1  TAATTCTTCCAGCTGATGGTCTTTGTGGGCAGGTTGTCTGCAGAGAGATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTCTTCCAGCTGATGGTCTTTGTGGGCAGGTTGTCTGCAGAGAGATT  250

seq1  ATAAAGTTTAAAATATCTTGTCTATAGATTCCAAGTCTAACCTGAGAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGTTTAAAATATCTTGTCTATAGATTCCAAGTCTAACCTGAGAAAT  300

seq1  GTTGTGAGACCTTGCTTCAAAATGACAAAATAAGAGGAGGTCTTGGTGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTGAGACCTTGCTTCAAAATGACAAAATAAGAGGAGGTCTTGGTGTG  350

seq1  TTTATTTCACTAGCAATTGTAGAAGTCTTTTCTAACTAGGAGGCCATTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTCACTAGCAATTGTAGAAGTCTTTTCTAACTAGGAGGCCATTTC  400

seq1  TTAAATGCTGGTGAGAAAACCTCTCCAATATACATAATTTTGAAATGAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATGCTGGTGAGAAAACCTCTCCAATATACATAATTTTGAAATGAGT  450

seq1  AGCATAATTTGAAAGAAAATAAATGTTTTCTACAGATAAGACACATTTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATAATTTGAAAGAAAATAAATGTTTTCTACAGATAAGACACATTTCT  500

seq1  AGAGATAATGTGTAGTATCAGAAACTACATAGTTGAAAGTTAGAGACTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATAATGTGTAGTATCAGAAACTACATAGTTGAAAGTTAGAGACTGT  550

seq1  AGGCACATATCAATGGACAATGTTTTTCGATCCATGACTTTATGTCCAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCACATATCAATGGACAATGTTTTTCGATCCATGACTTTATGTCCAAC  600

seq1  TGATAGAGTTGATAACTGAGTGTGGAATTTGAAGAAATAAATCATCCCCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAGAGTTGATAACTGAGTGTGGAATTTGAAGAAATAAATCATCCCCC  650

seq1  CAGCCATGCAGAATCAGAGCAAGTTTGCATTCTATAAAGTCTGTGTCGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCATGCAGAATCAGAGCAAGTTTGCATTCTATAAAGTCTGTGTCGTT  700

seq1  GGTGGTTTCAGAAGGGTAATTTAGCAAGCCATGGAGTTAACCCAGGCAG-  749
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GGTGGTTTCAGAAGGGTAATTTAGCAAGCCATGGAGTTAACCCAGGCAGA  750

seq1  AAGGCAGGCATGAAACTCTTAAAACAGAGGCCCTAAGAGAATTTCAGTTC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCAGGCATGAAACTCTTAAAACAGAGGCCCTAAGAGAATTTCAGTTC  800

seq1  GTGGATATCACTGTATGACATCTGTGAGACAGATCTGGAAAGCATCCGGA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGATATCACTGTATGACATCTGTGAGACAGATCTGGAAAGCATCCGGA  850

seq1  TTGAGGGCGAGGAAGGGGGAGGATTCTGGCAAAGAAAAGCTTAGCAAAAG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGGGCGAGGAAGGGGGAGGATTCTGGCAAAGAAAAGCTTAGCAAAAG  900

seq1  TGAACAGTGTACACCAAGGCAATTAGAGAATCCTGCATGCAACAGAAACA  949
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TGAACAGTGTACACCAAGGCAATTAGAGAATCCTGCATGC-ACAGAAACA  949

seq1  AAGATGATACTATTAAATTCAGAATCTTGGAGAGTAAATAAAAGAAGTAT  999
      |||||||||||||||||||||||||| |||||||||||| ||||||||||
seq2  AAGATGATACTATTAAATTCAGAATC-TGGAGAGTAAAT-AAAGAAGTAT  997

seq1  AATTATAAGCAATTTGTGACTGGCCAGTAAACTAGTTCTTGACAGAAGCA  1049
      |  ||||||| ||||||||||||||||||||||||||| |||||||||||
seq2  A--TATAAGC-ATTTGTGACTGGCCAGTAAACTAGTTC-TGACAGAAGCA  1043

seq1  ATTTAAGGGACTAAGTATTTATTTGGACTCATGTTTGAGACACTACAATC  1099
        || ||||||| |||||||||| |  |||||| |||| |||||   |||
seq2  --TTTAGGGACT-AGTATTTATTGGACCTCATG-TTGAAACACTTACATC  1089

seq1  CATCATGGCAGGGGTGATATGCCATGTGGTGCCAGGTACAGATCATAAGG  1149
      |||||| |||||||||||||| ||||||||||   ||||||||||||| |
seq2  CATCAT-GCAGGGGTGATATG-CATGTGGTGC--AGTACAGATCATAA-G  1134

seq1  GGTAGGAGGCAGATGCTCTCACAGCAGTTTACAA  1183
      |||||   |||||||||| | |||||| ||||||
seq2  GGTAG--AGCAGATGCTC-CTCAGCAG-TTACAA  1164