BAC Information

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BAC

Clone NameB6Ng01-149D23
Chromosome12 (Build37)
Map Location 113,180,754 - 113,321,136
singlet/doubletdoublet
Overlap gene2010107E04Rik, BC048943, Tdrd9
Upstream gene4930573I19Rik, Ankrd9, 6030440G07Rik, Rcor1, 4930595D18Rik, Traf3, Amn, Cdc42bpb, A230065H16Rik, 1200009I06Rik, Tnfaip2, Gm266, Eif5, Mark3, Ckb, 6720458F09Rik, Bag5, 2810002N01Rik, Klc1, Xrcc3, Zfyve21, Ppp1r13b, LOC100041886
Downstream geneA530050D06Rik, Kif26a, A730018C14Rik, A530016L24Rik, Tmem179, 2610204M08Rik, Adssl1, Siva1, Akt1, EG382639, AW555464, LOC382640, Pld4, AI450948, LOC100041194, BC022687, Cdca4, Gpr132, Jag2, Nudt14, Brf1, Btbd6, Pacs2, Tex22
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-149D23.bB6Ng01-149D23.g
ACCDH945639DH945640
length1,091986
definitionDH945639|Mus musculus domesticus DNA, BAC clone: B6Ng01-149D23, 5' end.DH945640|Mus musculus domesticus DNA, BAC clone: B6Ng01-149D23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(113,320,031 - 113,321,136)(113,180,754 - 113,181,740)
sequence
gaattccctgtataaccaggctgaccttgaactcagagatctacctaccc
ctgccccccaagtgtggctcttcctgccctagaggattgtggacaaagga
agcagagatgacaaacaggggttcagaagccctgtgagtatgtgtggtga
ataactcacactgggaccagctgcagggagtcagaccaactatactttgg
gtgactcaaggcttataaagttttgggggacggtgtgtagaaacatccag
gatgggcaaaggtcattggctgagggcttagggtaccaaaatgcctcatt
agtctggggaagcatttcaggagtctcagatgctaactgaacaggttctt
accaggagaaagcaagttacataacagttctcaggtagaggcaagcatgg
ggcttagaattccccacacagtcagagaaggagaagatctgctaaatgaa
aggagtctttcatattgtgccaagctcagaggctatccagtcatggtgga
ctttgaccttaattaatcttcccctctttgaacggtagactgagcctcta
gatgaggctggctgctgattagattttcatctagaactggctcatggact
aaggaaggaaacccaggaagattcacacctcttcaaactgtgccaacatg
ggaagatggttaaagggccagaaaaagaaagcaaatgtctggttttaaat
catcagtgatcaaacaggattaagttgaataaagcaaaaggagtcagttc
agggcctggccgagaggttcagcaggaaactgattccaaagaaaaccata
ggccgggcgtggtggcccacgcctttaatcccagcactcggaggcaaagg
caggtggatttctgagttcgaggccgggctggtctacaaagtgagttcca
ggacagccagggctatacaaagaaaccctgtcttgaaaaccgagagagga
gagagagacgagaggagagacgatgacgagagatgatgagaagagatgaa
gaagaagagagagagagaaactggcttgggagcatggctaatcacggtaa
agctgtgtcaggcagaagaaatccagtgttaaaggcaaggg
gaattccagtacaggtgggctacaaggagaccctgtctcaaacaagcaaa
caaacaaaaccacacacgaaaaagaagtttttgtgttctccagagatgca
ggtggttgtgaaccacccggtgtagatgctgggcactaaacttgggtcct
ctccaagagcaggacttgcccttaactgccaagccagttttccagccttg
gtggttggttggttggttggttattctatgcagagttacacccatgtagc
ccatgctggccaagaactcactacctacagtaatttccttgcttcagcct
gttgggtgctttatttttttttttctaggtattctagaacattctacaga
accgcctgagcagcctccctccagtttctcaggccttcttcctcctctgg
ttccttctggtcgggtggaatgtcagtcaaccagctggaagtgggagggg
gactcagaggattctggtctgcctttctgctcaaccctgacaagcagtgg
tgccccaaggctaccctgcaagcaagatgacccgctctgggaccacgaag
gaatcacacacgcgggctctgttctgagaaagggacaggtttagatgaga
aacaagagcactgcgctgctgcctctggcatctcggaaaaactccaggct
tcatgacaacagcttgtacctagaaccgaaaaagaagccagaagcgtgca
tgagcaacaggaattccagtcagtctgagcatctctggactccccaccac
aggaggctgggcctgcacatttcttgtagcatcttcctcactgctgagcc
cccttcctctgctctggggcgcatggaccgtacagactgggcaccatggc
aattcatgatgatggccagccagactgtccatcgcacactaaggaccaaa
acttgtccttcaagcagatctagggtttgatagcctgatccctctggctg
tagctccttaagccctctgtccttgtaagggcctgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_113320031_113321136
seq2: B6Ng01-149D23.b_60_1135 (reverse)

seq1  CCCTTGCCTTTAACACCTGGGATTCTTCCTGCCTGACCACCAGCTTTTCC  50
      ||||||||||||||| ||||  ||||| |||||||||   |||| ||| |
seq2  CCCTTGCCTTTAACA-CTGGATTTCTT-CTGCCTGAC--ACAGC-TTTAC  45

seq1  CGTGAATTAGCCATGCTCCCATGTCTATGTTTTTCTTCTTCTTCTTCTTC  100
      |||| |||||||||||||||| | |   |||| ||             ||
seq2  CGTG-ATTAGCCATGCTCCCAAGCC--AGTTTCTC-------------TC  79

seq1  TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT  150
      |   ||||||||||| || ||||| || || |||   || || || || |
seq2  TCTCTCTTCTTCTTCATC-TCTTC-TCATCATCT--CTCGTCATCGTC-T  124

seq1  CTTCTTCTTCTTCTTCTTCTTCTTCTTCGGTTTTTCAAGACAGGGTTTCT  200
      || ||   || |||   ||| ||   |||| |||||||||||||||||||
seq2  CTCCT--CTCGTCTCTCTCTCCTCTCTCGG-TTTTCAAGACAGGGTTTCT  171

seq1  TTGTATAGCCCTGGCTGTCCTGGAACTCACTTTGTAGACCAGGCCGGCCT  250
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TTGTATAGCCCTGGCTGTCCTGGAACTCACTTTGTAGACCAGCCCGGCCT  221

seq1  CGAACTCAGAAATCCACCTGCCTTTGCCTCCCGAGTGCTGGGATTAAAGG  300
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CGAACTCAGAAATCCACCTGCCTTTGCCT-CCGAGTGCTGGGATTAAAGG  270

seq1  CGTGGGCCACCACGCCCGGCCTATGGTTTTCTTTGGAATCAGTTTCCTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGGGCCACCACGCCCGGCCTATGGTTTTCTTTGGAATCAGTTTCCTGC  320

seq1  TGAACCTCTCGGCCAGGCCCTGAACTGACTCCTTTTGCTTTATTCAACTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACCTCTCGGCCAGGCCCTGAACTGACTCCTTTTGCTTTATTCAACTT  370

seq1  AATCCTGTTTGATCACTGATGATTTAAAACCAGACATTTGCTTTCTTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCTGTTTGATCACTGATGATTTAAAACCAGACATTTGCTTTCTTTTT  420

seq1  CTGGCCCTTTAACCATCTTCCCATGTTGGCACAGTTTGAAGAGGTGTGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCCCTTTAACCATCTTCCCATGTTGGCACAGTTTGAAGAGGTGTGAA  470

seq1  TCTTCCTGGGTTTCCTTCCTTAGTCCATGAGCCAGTTCTAGATGAAAATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCTGGGTTTCCTTCCTTAGTCCATGAGCCAGTTCTAGATGAAAATC  520

seq1  TAATCAGCAGCCAGCCTCATCTAGAGGCTCAGTCTACCGTTCAAAGAGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCAGCAGCCAGCCTCATCTAGAGGCTCAGTCTACCGTTCAAAGAGGG  570

seq1  GAAGATTAATTAAGGTCAAAGTCCACCATGACTGGATAGCCTCTGAGCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATTAATTAAGGTCAAAGTCCACCATGACTGGATAGCCTCTGAGCTT  620

seq1  GGCACAATATGAAAGACTCCTTTCATTTAGCAGATCTTCTCCTTCTCTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACAATATGAAAGACTCCTTTCATTTAGCAGATCTTCTCCTTCTCTGA  670

seq1  CTGTGTGGGGAATTCTAAGCCCCATGCTTGCCTCTACCTGAGAACTGTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTGGGGAATTCTAAGCCCCATGCTTGCCTCTACCTGAGAACTGTTA  720

seq1  TGTAACTTGCTTTCTCCTGGTAAGAACCTGTTCAGTTAGCATCTGAGACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAACTTGCTTTCTCCTGGTAAGAACCTGTTCAGTTAGCATCTGAGACT  770

seq1  CCTGAAATGCTTCCCCAGACTAATGAGGCATTTTGGTACCCTAAGCCCTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAAATGCTTCCCCAGACTAATGAGGCATTTTGGTACCCTAAGCCCTC  820

seq1  AGCCAATGACCTTTGCCCATCCTGGATGTTTCTACACACCGTCCCCCAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAATGACCTTTGCCCATCCTGGATGTTTCTACACACCGTCCCCCAAA  870

seq1  ACTTTATAAGCCTTGAGTCACCCAAAGTATAGTTGGTCTGACTCCCTGCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTATAAGCCTTGAGTCACCCAAAGTATAGTTGGTCTGACTCCCTGCA  920

seq1  GCTGGTCCCAGTGTGAGTTATTCACCACACATACTCACAGGGCTTCTGAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGTCCCAGTGTGAGTTATTCACCACACATACTCACAGGGCTTCTGAA  970

seq1  CCCCTGTTTGTCATCTCTGCTTCCTTTGTCCACAATCCTCTAGGGCAGGA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTGTTTGTCATCTCTGCTTCCTTTGTCCACAATCCTCTAGGGCAGGA  1020

seq1  AGAGCCACACTTGGGGGGCAGGGGTAGGTAGATCTCTGAGTTCAAGGTCA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCCACACTTGGGGGGCAGGGGTAGGTAGATCTCTGAGTTCAAGGTCA  1070

seq1  GCCTGG  1106
      ||||||
seq2  GCCTGG  1076

seq1: chr12_113180754_113181740
seq2: B6Ng01-149D23.g_69_1054

seq1  GAATTCCAGTACAGGTGGGCTACAAGGAGACCCTGTCTCAAACAAGCAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGTACAGGTGGGCTACAAGGAGACCCTGTCTCAAACAAGCAAA  50

seq1  CAAACAAAACCACACACGAAAAAGAAGTTTTTGTGTTCTCCAGAGATGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAAAACCACACACGAAAAAGAAGTTTTTGTGTTCTCCAGAGATGCA  100

seq1  GGTGGTTGTGAACCACCCGGTGTAGATGCTGGGCACTAAACTTGGGTCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGTTGTGAACCACCCGGTGTAGATGCTGGGCACTAAACTTGGGTCCT  150

seq1  CTCCAAGAGCAGGACTTGCCCTTAACTGCCAAGCCAGTTTTCCAGCCTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAAGAGCAGGACTTGCCCTTAACTGCCAAGCCAGTTTTCCAGCCTTG  200

seq1  GTGGTTGGTTGGTTGGTTGGTTATTCTATGCAGAGTTACACCCATGTAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTTGGTTGGTTGGTTGGTTATTCTATGCAGAGTTACACCCATGTAGC  250

seq1  CCATGCTGGCCAAGAACTCACTACCTACAGTAATTTCCTTGCTTCAGCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGCTGGCCAAGAACTCACTACCTACAGTAATTTCCTTGCTTCAGCCT  300

seq1  GTTGGGTGCTTTATTTTTTTTTTTCTAGGTATTCTAGAACATTCTACAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGGTGCTTTATTTTTTTTTTTCTAGGTATTCTAGAACATTCTACAGA  350

seq1  ACCGCCTGAGCAGCCTCCCTCCAGTTTCTCAGGCCTTCTTCCTCCTCTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGCCTGAGCAGCCTCCCTCCAGTTTCTCAGGCCTTCTTCCTCCTCTGG  400

seq1  TTCCTTCTGGTCGGGTGGAATGTCAGTCAACCAGCTGGAAGTGGGAGGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTCTGGTCGGGTGGAATGTCAGTCAACCAGCTGGAAGTGGGAGGGG  450

seq1  GACTCAGAGGATTCTGGTCTGCCTTTCTGCTCAACCCTGACAAGCAGTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCAGAGGATTCTGGTCTGCCTTTCTGCTCAACCCTGACAAGCAGTGG  500

seq1  TGCCCCAAGGCTACCCTGCAAGCAAGATGACCCGCTCTGGGACCACGAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCCAAGGCTACCCTGCAAGCAAGATGACCCGCTCTGGGACCACGAAG  550

seq1  GAATCACACACGCGGGCTCTGTTCTGAGAAAGGGACAGGTTTAGATGAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCACACACGCGGGCTCTGTTCTGAGAAAGGGACAGGTTTAGATGAGA  600

seq1  AACAAGAGCACTGCGCTGCTGCCTCTGGCATCTCGGAAAAACTCCAGGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGAGCACTGCGCTGCTGCCTCTGGCATCTCGGAAAAACTCCAGGCT  650

seq1  TCATGACAACAGCTTGTACCTAGAACCGAAAAAGAAGCCAGAAGCGTGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGACAACAGCTTGTACCTAGAACCGAAAAAGAAGCCAGAAGCGTGCA  700

seq1  TGAGCAACAGGAATTCCAGTCAGTCTGAGCAGCTCTGGACTCCCCACCAC  750
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TGAGCAACAGGAATTCCAGTCAGTCTGAGCATCTCTGGACTCCCCACCAC  750

seq1  AGGAGGCTGGGCCTGCACA-TTCCTGTAGCCATCTTCATCACTGCTGAGC  799
      ||||||||||||||||||| ||| ||||| ||||||| ||||||||||||
seq2  AGGAGGCTGGGCCTGCACATTTCTTGTAG-CATCTTCCTCACTGCTGAGC  799

seq1  CCCCTTCCCTCTGCTCTGGGCCGCATGGACCGTCCAGACTGGGCACCATG  849
      |||||| ||||||||||||| |||||||||||| ||||||||||||||||
seq2  CCCCTT-CCTCTGCTCTGGGGCGCATGGACCGTACAGACTGGGCACCATG  848

seq1  GCGATTCATGAGGATGGCCAGCC-GTCTGTCCATCCCAGACTAAAGGCCC  898
      || |||||||| ||||||||||| | ||||||||| || ||| |||| ||
seq2  GCAATTCATGATGATGGCCAGCCAGACTGTCCATCGCACACT-AAGGACC  897

seq1  AAAACTGGCCCTGCAAGGCAGACCTGGGTTTTGAGAGCCTGAGCCCTCTG  948
      |||||| | ||| ||| ||||| || || ||||| ||||||| |||||||
seq2  AAAACTTGTCCTTCAA-GCAGATCTAGGGTTTGATAGCCTGATCCCTCTG  946

seq1  GCTGTGCCTCCTAAGCCCCTCTGTCCCTGT-AGGGCCTGC  987
      |||||  ||||| |  |||||||||| ||| |||||||||
seq2  GCTGTAGCTCCTTAAGCCCTCTGTCCTTGTAAGGGCCTGC  986