BAC Information

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BAC

Clone NameB6Ng01-149E08
Chromosome12 (Build37)
Map Location 45,384,148 - 45,553,006
singlet/doubletdoublet
Overlap genePnpla8, Nrcam
Upstream geneLOC100039059, ENSMUSG00000066507, LOC100039081, LOC664854, Dnajb9, LOC100039062
Downstream geneEG620025, Stxbp6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-149E08.bB6Ng01-149E08.g
ACCDH945657DH945658
length1,199618
definitionDH945657|Mus musculus domesticus DNA, BAC clone: B6Ng01-149E08, 5' end.DH945658|Mus musculus domesticus DNA, BAC clone: B6Ng01-149E08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(45,384,148 - 45,385,342)(45,552,389 - 45,553,006)
sequence
gaattctttagcagaacagaaaagttactttgcagataaagaagaagatt
caggtaaacacagccttttccattacacatacggtataaccaccagattt
ggagagtcattctccgttttagcaaatcatattaattcctatttcaaaag
caagggaaaaatgtctcaaacaaaggaagataaacagcttcaggacaagc
cagaccttgaagaaaggaaatccagttctccaggccctgacaccgtggca
gacaggccagactcggaatctcccctagaagttaaagacaaactttccag
cccgacccagatgcctgaggctcacccagtgtctgcaaaacaaagtattg
ctaacttcctttctcgtcccactgaaggcgtacaagccttagtcggtggt
tacattggtggacttgtacccaaattaaagtctgatcccaagagtccgcc
cgaagaacaggaagtgtctgctaaaacagagcaggctgttaacaaagaca
agaaggcagaggagaaaaagcgtgtgctacttcagcaagaaaaggcaagt
tgtctttcagtgtgggcttaagaaatgttaaccatttgtagagtaactcc
atcttctaatcatgtttcatatccccttacagattattgcaagagtgagt
attgataacagaactcgagccttagttcaggccttaagaagaacagccga
cccaaagctctgtattactagggttgaagaactgacttttcatcttctag
aatttcctgaaggaaaaggagtggctatcaaggtaatttctaacttattt
aatatttgtcttgaaaaaaatttaaataagcctattaaagtggggaatgc
aaagcctttttatttaaattttttgttcttttaaatcatacaatatatat
tcaggaattgtcttattttatcatacaacatttagctaatgagttccctt
ttgtgctgtgacataaattctgctttgagcatgaatatttaatactttga
agtggagcatacgtttatgtcagttccatgcctcagaatcgtcaaattcc
taaatgcagtgcagcttgttttactgtggttaattatttttcagatagaa
ataggccagaagttggtcaacacctttcattccgatattttggatactaa
aatggtgaaaccagcctaggctatttatttagaattctgtcctaagcaa
gaattccttgacccaatgcaaaggcaaggatctactctacaaaaggcaag
agagttcacctgcagttctagcctcagaaagcagagggaaccccagagca
agttgaaagtgacactatccagattagaaagctctaggtttgattcaaag
atccaacctcaaaaacagtaaggtgcagagtcattgacaaagattcttaa
ctgtatgacatttccccaatcaggaatttgtcataatatgcagctctgtt
tcgcctaaaaaggcagaacatactgaatataattaaaccttacattaaac
tcagtcctcgttgatgatgtgtctatgtctacaatcaacagaatctgatt
tcatttttaaaacttggtatatgcagaacagcaaagcaacaaagatttaa
gcactcatgaatgttaatagaaacaaagtaactttattttgcttagggga
gaaaaaagcctaaaggaaactagtttaatgtcaacgaatatatcctaaat
attttttaaagcatagtagtgaggaatgatttttcaagttcactaaatac
acacacacacacacacacacagaggggggggaagggcgagggagagagag
agagagagagatagagag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_45384148_45385342
seq2: B6Ng01-149E08.b_49_1247

seq1  GAATTCTTTAGCAGAACAGAAAAGTTACTTTGCAGATAAAGAAGAAGATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTAGCAGAACAGAAAAGTTACTTTGCAGATAAAGAAGAAGATT  50

seq1  CAGGTAAACACAGCCTTTTCCATTACACATACGGTATAACCACCAGATTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTAAACACAGCCTTTTCCATTACACATACGGTATAACCACCAGATTT  100

seq1  GGAGAGTCATTCTCCGTTTTAGCAAATCATATTAATTCCTATTTCAAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGTCATTCTCCGTTTTAGCAAATCATATTAATTCCTATTTCAAAAG  150

seq1  CAAGGGAAAAATGTCTCAAACAAAGGAAGATAAACAGCTTCAGGACAAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGGAAAAATGTCTCAAACAAAGGAAGATAAACAGCTTCAGGACAAGC  200

seq1  CAGACCTTGAAGAAAGGAAATCCAGTTCTCCAGGCCCTGACACCGTGGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACCTTGAAGAAAGGAAATCCAGTTCTCCAGGCCCTGACACCGTGGCA  250

seq1  GACAGGCCAGACTCGGAATCTCCCCTAGAAGTTAAAGACAAACTTTCCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGGCCAGACTCGGAATCTCCCCTAGAAGTTAAAGACAAACTTTCCAG  300

seq1  CCCGACCCAGATGCCTGAGGCTCACCCAGTGTCTGCAAAACAAAGTATTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGACCCAGATGCCTGAGGCTCACCCAGTGTCTGCAAAACAAAGTATTG  350

seq1  CTAACTTCCTTTCTCGTCCCACTGAAGGCGTACAAGCCTTAGTCGGTGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACTTCCTTTCTCGTCCCACTGAAGGCGTACAAGCCTTAGTCGGTGGT  400

seq1  TACATTGGTGGACTTGTACCCAAATTAAAGTCTGATCCCAAGAGTCCGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTGGTGGACTTGTACCCAAATTAAAGTCTGATCCCAAGAGTCCGCC  450

seq1  CGAAGAACAGGAAGTGTCTGCTAAAACAGAGCAGGCTGTTAACAAAGACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAGAACAGGAAGTGTCTGCTAAAACAGAGCAGGCTGTTAACAAAGACA  500

seq1  AGAAGGCAGAGGAGAAAAAGCGTGTGCTACTTCAGCAAGAAAAGGCAAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGCAGAGGAGAAAAAGCGTGTGCTACTTCAGCAAGAAAAGGCAAGT  550

seq1  TGTCTTTCAGTGTGGGCTTAAGAAATGTTAACCATTTGTAGAGTAACTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTTCAGTGTGGGCTTAAGAAATGTTAACCATTTGTAGAGTAACTCC  600

seq1  ATCTTCTAATCATGTTTCATATCCCCTTACAGATTATTGCAAGAGTGAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCTAATCATGTTTCATATCCCCTTACAGATTATTGCAAGAGTGAGT  650

seq1  ATTGATAACAGAACTCGAGCCTTAGTTCAGGCCTTAAGAAGAACAGCCGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGATAACAGAACTCGAGCCTTAGTTCAGGCCTTAAGAAGAACAGCCGA  700

seq1  CCCAAAGCTCTGTATTACTAGGGTTGAAGAACTGACTTTTCATCTTCTAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAAGCTCTGTATTACTAGGGTTGAAGAACTGACTTTTCATCTTCTAG  750

seq1  AATTTCCTGAAGGAAAAGGAGTGGCTATCAAGGTAATTTCTAACTTATTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCCTGAAGGAAAAGGAGTGGCTATCAAGGTAATTTCTAACTTATTT  800

seq1  AATATTTGTCTTGAAAAAAAATTTAAATAAGCCTATTAAAGTGGGGAATG  850
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  AATATTTGTCTTG-AAAAAAATTTAAATAAGCCTATTAAAGTGGGGAATG  849

seq1  CAAAGCCTTTTTTATTTAAAATTTTTTGTTCTTTTAAATCATACAATATA  900
      ||||||| ||||||||| ||||||||||||||||||||||||||||||||
seq2  CAAAGCC-TTTTTATTT-AAATTTTTTGTTCTTTTAAATCATACAATATA  897

seq1  TATTCAGGAATTGTCTTATTTTATCATAC-ACATTAGGCTAATGAGTT-C  948
      ||||||||||||||||||||||||||||| |||||  ||||||||||| |
seq2  TATTCAGGAATTGTCTTATTTTATCATACAACATTTAGCTAATGAGTTCC  947

seq1  CTTTTGTGCTGTGACATAAATTCTGCTATGAGCATGAATATTT-ATACTT  997
      ||||||||||||||||||||||||||| ||||||||||||||| ||||||
seq2  CTTTTGTGCTGTGACATAAATTCTGCTTTGAGCATGAATATTTAATACTT  997

seq1  TGAAGTGGAGCATACGTTTATGTCAGTTCCATTGCCTCAGAATCGTCAAA  1047
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TGAAGTGGAGCATACGTTTATGTCAGTTCCA-TGCCTCAGAATCGTCAAA  1046

seq1  TTCTTAATTGCAGTGCAGC-TGTTTTACTGTG--TAATTATTTTTCAAGA  1094
      ||| ||| ||||||||||| ||||||||||||  |||||||||||| |||
seq2  TTCCTAAATGCAGTGCAGCTTGTTTTACTGTGGTTAATTATTTTTC-AGA  1095

seq1  TAGGAAATA-GCCAGATG-TGGTCAAACACCTTTAATCCCAGTA-TTTGG  1141
      || |||||| |||||| | ||||| ||||||||| || ||  || |||||
seq2  TA-GAAATAGGCCAGAAGTTGGTC-AACACCTTTCATTCCGATATTTTGG  1143

seq1  ATCATAAA--TGTGAGACCAGCCTAGGCTATTTATTAAG-ATTCTGTCTA  1188
      ||  ||||   |||| |||||||||||||||||||| || ||||||||  
seq2  ATACTAAAATGGTGAAACCAGCCTAGGCTATTTATTTAGAATTCTGTC-C  1192

seq1  AAAGCAA  1195
       ||||||
seq2  TAAGCAA  1199

seq1: chr12_45552389_45553006
seq2: B6Ng01-149E08.g_69_686 (reverse)

seq1  CTCTCTCTCTCTCTCTCTCTCTCTCTCCCTCGCCCTTCCCCCCCCTCTGT  50
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTATCTCTCTCTCTCTCTCTCTCCCTCGCCCTTCCCCCCCCTCTGT  50

seq1  GTGTGTGTGTGTGTGTGTGTATTTAGTGAACTTGAAAAATCATTCCTCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGTATTTAGTGAACTTGAAAAATCATTCCTCAC  100

seq1  TACTATGCTTTAAAAAATATTTAGGATATATTCGTTGACATTAAACTAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTATGCTTTAAAAAATATTTAGGATATATTCGTTGACATTAAACTAGT  150

seq1  TTCCTTTAGGCTTTTTTCTCCCCTAAGCAAAATAAAGTTACTTTGTTTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTAGGCTTTTTTCTCCCCTAAGCAAAATAAAGTTACTTTGTTTCT  200

seq1  ATTAACATTCATGAGTGCTTAAATCTTTGTTGCTTTGCTGTTCTGCATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAACATTCATGAGTGCTTAAATCTTTGTTGCTTTGCTGTTCTGCATAT  250

seq1  ACCAAGTTTTAAAAATGAAATCAGATTCTGTTGATTGTAGACATAGACAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAGTTTTAAAAATGAAATCAGATTCTGTTGATTGTAGACATAGACAC  300

seq1  ATCATCAACGAGGACTGAGTTTAATGTAAGGTTTAATTATATTCAGTATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATCAACGAGGACTGAGTTTAATGTAAGGTTTAATTATATTCAGTATG  350

seq1  TTCTGCCTTTTTAGGCGAAACAGAGCTGCATATTATGACAAATTCCTGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCCTTTTTAGGCGAAACAGAGCTGCATATTATGACAAATTCCTGAT  400

seq1  TGGGGAAATGTCATACAGTTAAGAATCTTTGTCAATGACTCTGCACCTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGAAATGTCATACAGTTAAGAATCTTTGTCAATGACTCTGCACCTTA  450

seq1  CTGTTTTTGAGGTTGGATCTTTGAATCAAACCTAGAGCTTTCTAATCTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTTTGAGGTTGGATCTTTGAATCAAACCTAGAGCTTTCTAATCTGG  500

seq1  ATAGTGTCACTTTCAACTTGCTCTGGGGTTCCCTCTGCTTTCTGAGGCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTGTCACTTTCAACTTGCTCTGGGGTTCCCTCTGCTTTCTGAGGCTA  550

seq1  GAACTGCAGGTGAACTCTCTTGCCTTTTGTAGAGTAGATCCTTGCCTTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTGCAGGTGAACTCTCTTGCCTTTTGTAGAGTAGATCCTTGCCTTTG  600

seq1  CATTGGGTCAAGGAATTC  618
      ||||||||||||||||||
seq2  CATTGGGTCAAGGAATTC  618