BAC Information

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BAC

Clone NameB6Ng01-149H19
Chromosome12 (Build37)
Map Location 15,292,300 - 15,293,393
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043256, Map1lc3-ps7, LOC668492, LOC100042426
Downstream geneLOC217409, Trib2, LOC100043268, EG432636, LOC100043273
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-149H19.bB6Ng01-149H19.g
ACCDH945813DH945814
length1,1101,084
definitionDH945813|Mus musculus domesticus DNA, BAC clone: B6Ng01-149H19, 5' end.DH945814|Mus musculus domesticus DNA, BAC clone: B6Ng01-149H19, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttagctatagtgtgcaacattaaaagcagacataaaactttatg
tacaatagaatatcaagaatataaaaaactacatcataaagactgaagga
aaattcatgaaattattaagtatgatcattttaagattataggggatgat
catttccccctataattttcctgctatgcctatatcttttgttattgcta
ggtgataaagatatttaactaaaattttaattcccatttcaccaaatgtg
aaactaacttattatttaggaaattaatttcagtattcaaataggataat
ttatggcattttaatacttttcaatatatccatattcaagattagtttgt
attctggtgagtttcattatataacaatggttccactaaggataattttg
ttacttacagtgttcttttgtagagatagagtctatttttttcaagaata
taaattggtgatggttgacaattcccccagtctctgttctatcctctgtc
cccacatttcatgtagacaggattaattttgggttgaaagttttatgggt
gtgttggtgtgcctatggcttcactggggttcctgactggctacaggagg
tagctttaggtttcatatatccattgattcttgggtgcctctcttatcgt
aggtctctgtcttgtactgaagatgacacccacctccccatccatggcag
ttgcacacacatttccattcattttcatgggagcttggccatctctccag
tagccccacagaactgacactgaagcccccattttactccagttgagacc
catcccatgggtaagcagtagtacctgacactattaatgatattctgtta
cgcttgaagagaggattctagcagggttgtcctatgcgaggttttactga
gcacctgaatcagacagatgcagccactcacagccaagcaatggatggag
cttagagactctcatggaagaatagagaatgatgtgagccctaacaggac
agaactcacaggaaggcacagatcaactaacctgactcttgggctttcag
aactgaccaccaaccgaacagcatacatggctgaacctaggctccccacc
atgtataacg
gaattctcttgggaccatttggtctcataaatgtcatctacccaaattgt
ctgagtgtttctctttgggaagcattttgaaaagtcaaaaaaaaaaaatt
aaaagtcaggaaatatttaaacaagagtaatagccatgatttttaaaaag
taaataataaaataagttctttccagattaagccaatcagaaacgatgct
gcttaccctcatgtacatacattagcctgcattaagaagtcatccaaaga
gctaaaatttgcaaacttgagtcgacttcataagaaatatatctcacatt
tactcaatttatataagaataactaggaggtttttatctagacatctata
acaaaatatgtgatgtacatgcatgtaactcatttccttggtaatgacat
ggctgaagaagaatgccatggcagtctttctaagtgctacacactgggga
gattgtgaatgcaggagtagacgtatttgatttcagaggctcaaagggtc
tctgggactatgtggtccagctctgagcatcatctagacagtggctttca
atccttggtttgtgaaccctttaaggggttgcatatcagatatcttgtgc
atttgatgtttacattacaattcataacagtagtaaaattagagttatga
agtagcagccatataatttcatgcttaggatcatcacaacacaaggaaat
gtattaaatggtcacaattttcaaaaagttgatggccagtgatctagcag
aaggcacacacagaggatcctccgaccatttcctctcttatcttcattgt
ttgtaggaggacacacaattggcagctgttctgtctgcagaggttttgtt
tatgtgcgttctcaaatgaatctggttccaatgtatctgtgtcttttagt
tgttccaggattaagttgtttactgcttgaaggagaaatctactgcactg
ggtagctcagttttatcagcaatatcttatcttatcacttcttgtttctc
taagcatctcatcactgataatgtctttctaagaatgatcataaaacagt
aaggttttaggacagttgtcaatacatgcccaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_15292300_15293393
seq2: B6Ng01-149H19.g_68_1151

seq1  GAATTCTCTTGGGACCATTTGGTCTCATAAATGTCATCTACCCAAATTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTGGGACCATTTGGTCTCATAAATGTCATCTACCCAAATTGT  50

seq1  CTGAGTGTTTCTCTTTGGGAAGCATTTTGAAAAGTCAAAAAAAAAAAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTGTTTCTCTTTGGGAAGCATTTTGAAAAGTCAAAAAAAAAAAATT  100

seq1  AAAAGTCAGGAAATATTTAAACAAGAGTAATAGCCATGATTTTTAAAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTCAGGAAATATTTAAACAAGAGTAATAGCCATGATTTTTAAAAAG  150

seq1  TAAATAATAAAATAAGTTCTTTCCAGATTAAGCCAATCAGAAACGATGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAATAAAATAAGTTCTTTCCAGATTAAGCCAATCAGAAACGATGCT  200

seq1  GCTTACCCTCATGTACATACATTAGCCTGCATTAAGAAGTCATCCAAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTACCCTCATGTACATACATTAGCCTGCATTAAGAAGTCATCCAAAGA  250

seq1  GCTAAAATTTGCAAACTTGAGTCGACTTCATAAGAAATATATCTCACATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAAATTTGCAAACTTGAGTCGACTTCATAAGAAATATATCTCACATT  300

seq1  TACTCAATTTATATAAGAATAACTAGGAGGTTTTTATCTAGACATCTATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCAATTTATATAAGAATAACTAGGAGGTTTTTATCTAGACATCTATA  350

seq1  ACAAAATATGTGATGTACATGCATGTAACTCATTTCCTTGGTAATGACAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAATATGTGATGTACATGCATGTAACTCATTTCCTTGGTAATGACAT  400

seq1  GGCTGAAGAAGAATGCCATGGCAGTCTTTCTAAGTGCTACACACTGGGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGAAGAAGAATGCCATGGCAGTCTTTCTAAGTGCTACACACTGGGGA  450

seq1  GATTGTGAATGCAGGAGTAGACGTATTTGATTTCAGAGGCTCAAAGGGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGTGAATGCAGGAGTAGACGTATTTGATTTCAGAGGCTCAAAGGGTC  500

seq1  TCTGGGACTATGTGGTCCAGCTCTGAGCATCATCTAGACAGTGGCTTTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGACTATGTGGTCCAGCTCTGAGCATCATCTAGACAGTGGCTTTCA  550

seq1  ATCCTTGGTTTGTGAACCCTTTAAGGGGTTGCATATCAGATATCTTGTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTGGTTTGTGAACCCTTTAAGGGGTTGCATATCAGATATCTTGTGC  600

seq1  ATTTGATGTTTACATTACAATTCATAACAGTAGTAAAATTAGAGTTATGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGATGTTTACATTACAATTCATAACAGTAGTAAAATTAGAGTTATGA  650

seq1  AGTAGCAGCCATATAATTTCATGCTTAGGATCATCACAACACAAGGAAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGCAGCCATATAATTTCATGCTTAGGATCATCACAACACAAGGAAAT  700

seq1  GTATTAAATGGTCACAATTTTCAAAAAGTTGATGGCCAGTGATCTAGCAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTAAATGGTCACAATTTTCAAAAAGTTGATGGCCAGTGATCTAGCAG  750

seq1  AAGGCACACACAGAGGATCCTCCGACCATTTCCTCTCTTATCTTCATTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCACACACAGAGGATCCTCCGACCATTTCCTCTCTTATCTTCATTGT  800

seq1  TTGTAGGAGGACACACAATTGGCAGCTGTTCTGTCTGCAGAGGTTTTGTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAGGAGGACACACAATTGGCAGCTGTTCTGTCTGCAGAGGTTTTGTT  850

seq1  TATGTGCGTTCTCCAAATGAATCTGGTTCCAATGTATCTGTGTCTTTTAG  900
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TATGTGCGTTCT-CAAATGAATCTGGTTCCAATGTATCTGTGTCTTTTAG  899

seq1  TTGTTCCAGGATTAAGTTGTTTACTGCCTGAAGGAGAAATCTACTGCACT  950
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TTGTTCCAGGATTAAGTTGTTTACTGCTTGAAGGAGAAATCTACTGCACT  949

seq1  GGGTAGCTCAGTTTTATCAGCAATATCTTATCTTATCCACCTTCTTGTTT  1000
      |||||||||||||||||||||||||||||||||||||   ||||||||||
seq2  GGGTAGCTCAGTTTTATCAGCAATATCTTATCTTATC--ACTTCTTGTTT  997

seq1  CTCTAAGCATCTCATCAACTGATAATGTCCTTTCT-AGAATGATCCATAA  1049
      |||||||||||||||| ||||||||||| |||||| |||||||| |||||
seq2  CTCTAAGCATCTCATC-ACTGATAATGT-CTTTCTAAGAATGAT-CATAA  1044

seq1  AACAGTGAGGGTTTTATAAGACAAGTTGTTCAATACATGCCCAAA  1094
      |||||| |||   || || ||| ||||| ||||||||||||||||
seq2  AACAGTAAGG---TTTTAGGAC-AGTTG-TCAATACATGCCCAAA  1084