BAC Information

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BAC

Clone NameB6Ng01-150B14
Chromosome12 (Build37)
Map Location 33,604,295 - 33,605,333
singlet/doubletsinglet
Overlap gene4933406C10Rik
Upstream geneHbp1, Prkar2b, Pik3cg, 2010109K11Rik, LOC100043548, Pbef1, LOC100043553
Downstream geneSypl, LOC100043109, 1110049B09Rik, Atxn7l4, Atxn7l1, 4930504H06Rik, Twistnb, LOC668801, LOC668806
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-150B14.bB6Ng01-150B14.g
ACCDH946265DH946266
length1,2371,030
definitionDH946265|Mus musculus domesticus DNA, BAC clone: B6Ng01-150B14, 5' end.DH946266|Mus musculus domesticus DNA, BAC clone: B6Ng01-150B14, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcctggtaatagtttattataggccacatcttgtcaactgtctt
gtttacattcctgaaagtactattttgcccttagcatagttgagttctta
gtgacagtttaatccttattgattgcttgtaagctttcttaggtaaaacc
agtgtagtttttagcctaggatgatgttttacccatgactactgagacaa
gtatctcctgaatatattatactgttctccaaaagtaacggagctttcca
ctctggctgttaggaagagaggttttttttttttttttcaggccgattat
gagctgtatacattgagtcctgtggttgtctcgctagtactttgcccatc
tttttaaaattccctccaccatgtgtacttgctggtgctcaattaaagac
tctacaaagctttgttgtgagcagagttctctcctgtacggctctttcct
tcatgatacctgtcttgaaagtcccagactcttcattctctcaactctct
cagctttgagtcctcaattcagacaggcagtaggggtctgcctgaaaact
ctctaggcagtagtaagcttgggcaagtgtacagcttacctcattcattg
ccatgccctttatacttgacccttgatatgaacctgatattcctgttctt
gactttcagttgtttaaaagaagaggataaagtaggactatgttaatcca
tattgccaaaactgacagtatttctttgcattatattttagtcattgctc
tatggatgcattataaatccttagtttttcagtctgcatgcatacattta
atattgtgtcactcacataaaatacagaaacctgaagccatctgttatga
acattaccaccccattatttccatcattattatgtgtgtactccgtctgc
ctttgttatgtcatacaagtattactattagtttagagtcattattcaca
taaagaattaagaggtgatatcaagaaaatattcatttgtactggctttt
taaatgttatttattcttttatgaggctttgacattgtctagtacccctg
tcttcagaggtggaggatacttcaggtctttttcactgacatcttaggtt
tctttcaatcttaaggaatctttctctttcacatgaacttggggtgaaga
tcctctatgcgttaggagttttactttgagatgttttggacaggtcatgg
tcttatatgctgagaatatgtgcggcggcagacctgc
gaattcaacgttttgaaattggagacttcctacttttctagctccagact
taattcttaagtctccagagcaaacgcccagaggaaggttgctgccctac
ccctaggccctctactgccctctgctggaacattgctgccagcatgaccg
gtgctaatcctcaattcttgggccagttcttcaaggcaactaagtttctg
tttgtaatagactgaagctgccaaactagttatagatttcaggacataac
cgaatactaagtaaaatattttttttttttattaacagggtgagcaacaa
tgttgttaaaagcagccaatcgtgactgtggccttttaacttctcagctg
agaaagaaaagacagcgggtgcctttatactgcaaaacaagaccttcttg
atgaagattttgtgcaatgcattgtgaccatacttaaggtgcatccagtt
agacatgctcagttttcagtgacccacaaagagggacatgactgtaaaat
gaaacaactcaaaataccttgggatggatggagctcggggaagaagagct
cagacatagacagcagggaaggtcacttatgccaagatgaagtgtaaata
ttttatccaggggacggcagggacaggatgggcacaggcgagaatggtgt
gtatccacagcttcacacatacctacttctatccacgcctgtatgttggc
atagatgttatcagatttcttaagagtctaattttaaagccgctactgac
acctttctgtgggacaggataaaaaagagtgggcagcaagcctgcatttt
gagaagaagcctctttgcaccccacatttaagatccctcttggctgtgaa
agaaaaccaaagatacaaaaccacacagaagcagagcttaatggatgatg
gtaggatgttggatcatagctgccctcttcccgcttcagaaccactcttt
ttgataaaatcatgcctccctgcatcccttctaggtagccatctcatgtt
gtgccctcaacactgcagtacattgtccct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_33604295_33605333
seq2: B6Ng01-150B14.g_68_1097 (reverse)

seq1  AGGGACAATGTTAACCTGCAGTGTTGAGGGCCACACATTGAGATGGCTAC  50
      |||||||||||    ||||||||||||||| ||||   ||||||||||||
seq2  AGGGACAATGT---ACTGCAGTGTTGAGGG-CACAACATGAGATGGCTAC  46

seq1  CTAGAAGGGAATGCAGGGAGGCAATGATTTTATTCAAAAAGAGTGGTTCC  100
      ||||||||| |||||||||||| ||||||||| ||||||||||||||| |
seq2  CTAGAAGGG-ATGCAGGGAGGC-ATGATTTTA-TCAAAAAGAGTGGTT-C  92

seq1  TGAGGCGGGAAGAGGGCAGCTATGATCCAACATCCTTACCATCATCCATT  150
      ||| ||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TGAAGCGGGAAGAGGGCAGCTATGATCCAACATCC-TACCATCATCCATT  141

seq1  AAGCTCTGCTTCTGTGTGGTTTTGTATCTTTGGTTTTCTTTCACAGCCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTCTGCTTCTGTGTGGTTTTGTATCTTTGGTTTTCTTTCACAGCCAA  191

seq1  GAGGGATCTTAAATGTGGGGTGCAAAGAGGCTTCTTCTCAAAATGCAGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGATCTTAAATGTGGGGTGCAAAGAGGCTTCTTCTCAAAATGCAGGC  241

seq1  TTGCTGCCCACTCTTTTTTATCCTGTCCCACAGAAAGGTGTCAGTAGCGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGCCCACTCTTTTTTATCCTGTCCCACAGAAAGGTGTCAGTAGCGG  291

seq1  CTTTAAAATTAGACTCTTAAGAAATCTGATAACATCTATGCCAACATACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAAAATTAGACTCTTAAGAAATCTGATAACATCTATGCCAACATACA  341

seq1  GGCGTGGATAGAAGTAGGTATGTGTGAAGCTGTGGATACACACCATTCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGTGGATAGAAGTAGGTATGTGTGAAGCTGTGGATACACACCATTCTC  391

seq1  GCCTGTGCCCATCCTGTCCCTGCCGTCCCCTGGATAAAATATTTACACTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGTGCCCATCCTGTCCCTGCCGTCCCCTGGATAAAATATTTACACTT  441

seq1  CATCTTGGCATAAGTGACCTTCCCTGCTGTCTATGTCTGAGCTCTTCTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTGGCATAAGTGACCTTCCCTGCTGTCTATGTCTGAGCTCTTCTTC  491

seq1  CCCGAGCTCCATCCATCCCAAGGTATTTTGAGTTGTTTCATTTTACAGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGAGCTCCATCCATCCCAAGGTATTTTGAGTTGTTTCATTTTACAGTC  541

seq1  ATGTCCCTCTTTGTGGGTCACTGAAAACTGAGCATGTCTAACTGGATGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCCCTCTTTGTGGGTCACTGAAAACTGAGCATGTCTAACTGGATGCA  591

seq1  CCTTAAGTATGGTCACAATGCATTGCACAAAATCTTCATCAAGAAGGTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAAGTATGGTCACAATGCATTGCACAAAATCTTCATCAAGAAGGTCT  641

seq1  TGTTTTGCAGTATAAAGGCACCCGCTGTCTTTTCTTTCTCAGCTGAGAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTGCAGTATAAAGGCACCCGCTGTCTTTTCTTTCTCAGCTGAGAAG  691

seq1  TTAAAAGGCCACAGTCACGATTGGCTGCTTTTAACAACATTGTTGCTCAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAGGCCACAGTCACGATTGGCTGCTTTTAACAACATTGTTGCTCAC  741

seq1  CCTGTTAATAAAAAAAAAAAATATTTTACTTAGTATTCGGTTATGTCCTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTAATAAAAAAAAAAAATATTTTACTTAGTATTCGGTTATGTCCTG  791

seq1  AAATCTATAACTAGTTTGGCAGCTTCAGTCTATTACAAACAGAAACTTAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTATAACTAGTTTGGCAGCTTCAGTCTATTACAAACAGAAACTTAG  841

seq1  TTGCCTTGAAGAACTGGCCCAAGAATTGAGGATTAGCACCGGTCATGCTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTTGAAGAACTGGCCCAAGAATTGAGGATTAGCACCGGTCATGCTG  891

seq1  GCAGCAATGTTCCAGCAGAGGGCAGTAGAGGGCCTAGGGGTAGGGCAGCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCAATGTTCCAGCAGAGGGCAGTAGAGGGCCTAGGGGTAGGGCAGCA  941

seq1  ACCTTCCTCTGGGCGTTTGCTCTGGAGACTTAAGAATTAAGTCTGGAGCT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTCCTCTGGGCGTTTGCTCTGGAGACTTAAGAATTAAGTCTGGAGCT  991

seq1  AGAAAAGTAGGAAGTCTCCAATTTCAAAACGTTGAATTC  1039
      |||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAGTAGGAAGTCTCCAATTTCAAAACGTTGAATTC  1030