BAC Information

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BAC

Clone NameB6Ng01-150D20
Chromosome12 (Build37)
Map Location 66,908,811 - 67,031,270
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC217645, LOC217647, Gm527, Klhl28, A430041B07Rik, Prpf39, Fkbp3, Fancm, C79407, Wdr20b
Downstream geneLOC100040700, EG238217, Mdga2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-150D20.bB6Ng01-150D20.g
ACCDH946370DH946371
length1,181911
definitionDH946370|Mus musculus domesticus DNA, BAC clone: B6Ng01-150D20, 5' end.DH946371|Mus musculus domesticus DNA, BAC clone: B6Ng01-150D20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(66,908,811 - 66,909,534)(67,030,327 - 67,031,270)
sequence
gaattcttcatctgcttcagagctactaagagctggctccccgagcccat
ccagcgatgagcacaggctccttttcctagagacctccgctaattgatct
ttctttttttccctttttcctctttttcttttaatctctctccaggtatt
cctacctaaccttaacttttcctcgggttcaagacccttggaaaggcctg
tatacttattttgtgtaccatatttcctctttgttcctactctctctccc
cgctttacttctgatagcttgtcctgaatttcatctagaatccgccctgc
cttaaccacttgataacatgtgaaaaggaacaaaagggcttctaacacta
gaaaaaattcaaggccaaacatattccactttacttctgatagactgtct
tgaatttccttagaaagttcaagatcagacttacctcgtaaagctgtact
cactggtactctcgttccccagctgaaaagttctgaattcatacagttga
atccttcttaacagtctgctttacgggaacctttattaccgcgacccgca
gttctggttctggaatgagggatcttccttgcgccagtcccgagtttttt
ctcgtcccggaattcggcaccaattgttattagacgcgttctcacaaccg
gccaggaaagacgcaacaaaccagaatcttctgcggcaaagctttattgc
ttacatcttcaggagccagagtgcaagaagcaagagagagagaaaacgaa
accccgtccctcttaaggagcattctccttcgcctcggacgtgtcactcc
ctgattggctgcagcccatcggccgagtttgacgtcacggggaaggcaga
gcacagtagtcataagatacccttggcacatgcgcagattatttgtttac
cacttagacacagctgtcggcgccatcttgtaacggcgaatgtggggggg
cgctcccaacaaactcacacagctaaaggctcatgagtctgacatgtttt
atatgatttagcttttgttctcctttataaatcccccctttcatctttca
tcctttaaacttcctcaataaatgatgatatttaatagtccatgtatttt
aaattatcttcataggatatactcttatgtcttcaggaatatcctagaaa
tacaatgcacaagcatgggctgttaccgttc
gaattccagttaacaactccatttatagcccataggaagtgttccgaggc
tgcatcagcttgctccacagtctctgtgattctgaggataaatcactatg
agtaaagacatacaatctaaaatgatctatcacaactgaaaatcaataca
tcaagagcataaaagagtctaggataattcacttgccaagccataaatta
ggcatgcatatcaatgccacatgggatgcaatacctcataaaaataagct
taaaattcttaaaatatatgattaatgaaactaccacagcttgaaatata
tatattatactgcttacactaaccaatatattatactcagagttttatgc
ttctgagaaatggcatttacatacacagtatcaacagtgacaataaatca
gaatttcttgctccaaagtccaattctttgggtagtgattcatgtttcac
tttttaaaatggtgatttacactaatgtatttctcataaaatatttaata
cttcttacaattattgccaaaactgtgttctagccacttttatcaggatg
cccagagaaactcttcccaaggcaatcataaatttttgaactttgatatt
tacaataaagtgacaatattttatactcttaaaatcttgtgcacaaaccc
tgagcctccttctcagcctacccatctgctgcagatatccacagctaata
atgtttgggtgttgcaaatcactggcttaatgtggtctgggatctgttcc
accaacagtctgtgctggctgctgtttcaatgtaacccaaagcatgtttg
agattattattaaaacccgagcaaccttgactcctttgaggatgaatatg
gagtccagtaaagattccttacagttcatacctactaagaccaatctatc
cgcctgcttta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_66908811_66909534
seq2: B6Ng01-150D20.b_507_1225

seq1  CGTTCCCCAGCTGAAAAGTTCTGAATTCATACAGTTGAATCCTTCTTAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTCCCCAGCTGAAAAGTTCTGAATTCATACAGTTGAATCCTTCTTAAC  50

seq1  AGTCTGCTTTACGGGAACCTTTATTACCGCGACCCGCAGTTCTGGTTCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGCTTTACGGGAACCTTTATTACCGCGACCCGCAGTTCTGGTTCTG  100

seq1  GAATGAGGGATCTTCCTTGCGCCAGTCCCGAGTTTTTTCTCGTCCCGGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAGGGATCTTCCTTGCGCCAGTCCCGAGTTTTTTCTCGTCCCGGAA  150

seq1  TTCGGCACCAATTGTTATTAGACGCGTTCTCACAACCGGCCAGGAAAGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGGCACCAATTGTTATTAGACGCGTTCTCACAACCGGCCAGGAAAGAC  200

seq1  GCAACAAACCAGAATCTTCTGCGGCAAAGCTTTATTGCTTACATCTTCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACAAACCAGAATCTTCTGCGGCAAAGCTTTATTGCTTACATCTTCAG  250

seq1  GAGCCAGAGTGCAAGAAGCAAGAGAGAGAGAAAACGAAACCCCGTCCCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCAGAGTGCAAGAAGCAAGAGAGAGAGAAAACGAAACCCCGTCCCTC  300

seq1  TTAAGGAGCATTCTCCTTCGCCTCGGACGTGTCACTCCCTGATTGGCTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGGAGCATTCTCCTTCGCCTCGGACGTGTCACTCCCTGATTGGCTGC  350

seq1  AGCCCATCGGCCGAG-TTGACGTCACGGGGAAGGCAGAGCACAAGTAGTC  399
      ||||||||||||||| |||||||||||||||||||||||||| |||||||
seq2  AGCCCATCGGCCGAGTTTGACGTCACGGGGAAGGCAGAGCAC-AGTAGTC  399

seq1  ATAAGATACCCTTGGCACATGCGCAGATTATTTGTTTACCACTTAGAACA  449
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  ATAAGATACCCTTGGCACATGCGCAGATTATTTGTTTACCACTTAG-ACA  448

seq1  CAGCTGTCGGCGCCATCTTGTAACGGCGAATGTGGGGGCG-GCTCCCAAC  498
      |||||||||||||||||||||||||||||||||||||| | |||||||||
seq2  CAGCTGTCGGCGCCATCTTGTAACGGCGAATGTGGGGGGGCGCTCCCAAC  498

seq1  AAACTCACACAGCTAAAGGCTCATGAGTCTGACATGTTTTATATGATTTA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCACACAGCTAAAGGCTCATGAGTCTGACATGTTTTATATGATTTA  548

seq1  GCTTTTGTTCTCCTTTATAAATCCCCCCTTTCATCTTTTCAATCCTTTAA  598
      ||||||||||||||||||||||||||||||||||||||   |||||||||
seq2  GCTTTTGTTCTCCTTTATAAATCCCCCCTTTCATCTTT--CATCCTTTAA  596

seq1  ACCTTCTCAAATAAATGATGAATATTTATTAGTCCATGTATTTTAAATTA  648
      || | ||| ||||||||||| ||||||| |||||||||||||||||||||
seq2  ACTTCCTC-AATAAATGATG-ATATTTAATAGTCCATGTATTTTAAATTA  644

seq1  TCTTCATAGTATATACTCTTATGTCCTTCAGGGAATATCCTAGAAATTAC  698
      ||||||||| |||||||||||||| ||||| ||||||||||||||| |||
seq2  TCTTCATAGGATATACTCTTATGT-CTTCA-GGAATATCCTAGAAA-TAC  691

seq1  AATGCACAAGCAT-GGCTGTTA-CGTTC  724
      ||||||||||||| |||||||| |||||
seq2  AATGCACAAGCATGGGCTGTTACCGTTC  719

seq1: chr12_67030327_67031270
seq2: B6Ng01-150D20.g_70_980 (reverse)

seq1  TAAAGCAGGGGCAGAGTATGATTGGGTCTTATGTAGGTGATGAACTGGTA  50
      ||||||||| | | |    |||| ||||||| |||||| ||||||| |||
seq2  TAAAGCAGGCGGATA----GATT-GGTCTTA-GTAGGT-ATGAACT-GTA  42

seq1  TGGAGATTCTTTATACTGGAACTCCATGATGTCCATCCTCAGATGAAGTT  100
       |  || ||||  |||||| |||||   || | |||||||| | ||   |
seq2  AG--GAATCTT--TACTGG-ACTCC---ATATTCATCCTCAAAGGA--GT  82

seq1  CAGTGTTGCTCGTGTTTTCTAATAATAATTCCTTCAAAACATGCTTTGGG  150
      ||  |||||||| ||||  ||||||||||  |    ||||||||||||||
seq2  CAAGGTTGCTCGGGTTT--TAATAATAATCTC----AAACATGCTTTGGG  126

seq1  TTACATTTTGGAAAACAGCAGCCAGCACAGACTGTTGGTGGAACAGATCC  200
      |||||||     ||||||||||||||||||||||||||||||||||||||
seq2  TTACATT----GAAACAGCAGCCAGCACAGACTGTTGGTGGAACAGATCC  172

seq1  CAGACCACATTAAGCCAGTGAATTTGCAACACCCCATACATTATTAGCTG  250
      |||||||||||||||||||| |||||||||| |||| |||||||||||||
seq2  CAGACCACATTAAGCCAGTG-ATTTGCAACA-CCCAAACATTATTAGCTG  220

seq1  TGGATATCTGCAGCAGATGGGTAGGCTGAGAAGGAGGCTCAGGGTTTGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TGGATATCTGCAGCAGATGGGTAGGCTGAGAAGGAGGCTCAGGGTTTGT-  269

seq1  GCACAAGAATTTTAAGAGTATAAAATATTGTCACTTTATTGTAAAATATC  350
      ||||||| |||||||||||||||||||||||||||||||||| |||||||
seq2  GCACAAG-ATTTTAAGAGTATAAAATATTGTCACTTTATTGT-AAATATC  317

seq1  AAAGTTCAAAAATTTATGATTGCCTTGGGAAGAGTTTCTCTGGGCATCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTCAAAAATTTATGATTGCCTTGGGAAGAGTTTCTCTGGGCATCCT  367

seq1  GATAAAAGTGGCTAGAACACAGTTTTGGCAATAATTGTAAGAAGTATTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAAAGTGGCTAGAACACAGTTTTGGCAATAATTGTAAGAAGTATTAA  417

seq1  ATATTTTATGAGAAATACATTAGTGTAAATCACCATTTTAAAAAGTGAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTATGAGAAATACATTAGTGTAAATCACCATTTTAAAAAGTGAAA  467

seq1  CATGAATCACTACCCAAAGAATTGGACTTTGGAGCAAGAAATTCTGATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAATCACTACCCAAAGAATTGGACTTTGGAGCAAGAAATTCTGATTT  517

seq1  ATTGTCACTGTTGATACTGTGTATGTAAATGCCATTTCTCAGAAGCATAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTCACTGTTGATACTGTGTATGTAAATGCCATTTCTCAGAAGCATAA  567

seq1  AACTCTGAGTATAATATATTGGTTAGTGTAAGCAGTATAATATATATATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTGAGTATAATATATTGGTTAGTGTAAGCAGTATAATATATATATT  617

seq1  TCAAGCTGTGGTAGTTTCATTAATCATATATTTTAAGAATTTTAAGCTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGCTGTGGTAGTTTCATTAATCATATATTTTAAGAATTTTAAGCTTA  667

seq1  TTTTTATGAGGTATTGCATCCCATGTGGCATTGATATGCATGCCTAATTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATGAGGTATTGCATCCCATGTGGCATTGATATGCATGCCTAATTT  717

seq1  ATGGCTTGGCAAGTGAATTATCCTAGACTCTTTTATGCTCTTGATGTATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTTGGCAAGTGAATTATCCTAGACTCTTTTATGCTCTTGATGTATT  767

seq1  GATTTTCAGTTGTGATAGATCATTTTAGATTGTATGTCTTTACTCATAGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTCAGTTGTGATAGATCATTTTAGATTGTATGTCTTTACTCATAGT  817

seq1  GATTTATCCTCAGAATCACAGAGACTGTGGAGCAAGCTGATGCAGCCTCG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTATCCTCAGAATCACAGAGACTGTGGAGCAAGCTGATGCAGCCTCG  867

seq1  GAACACTTCCTATGGGCTATAAATGGAGTTGTTAACTGGAATTC  944
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACACTTCCTATGGGCTATAAATGGAGTTGTTAACTGGAATTC  911