BAC Information

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BAC

Clone NameB6Ng01-151I05
Chromosome12 (Build37)
Map Location 15,855,518 - 16,060,765
singlet/doubletdoublet
Overlap geneEG432636, LOC100043273
Upstream geneLOC668492, LOC100042426, LOC217409, Trib2, LOC100043268
Downstream geneLpin1, Ntsr2, Greb1, E2f6, Rock2, Pqlc3, 2410004P03Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-151I05.bB6Ng01-151I05.g
ACCDH947313DH947314
length761824
definitionDH947313|Mus musculus domesticus DNA, BAC clone: B6Ng01-151I05, 5' end.DH947314|Mus musculus domesticus DNA, BAC clone: B6Ng01-151I05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(16,060,007 - 16,060,765)(15,855,518 - 15,856,340)
sequence
gaattcaactagctctgcctctctcccctgagatctgcaaaaggcaaaca
gctctggtaaaactagagaacaatttcccaagcaggagactgggaacttt
taacgagccaagtgagcctgcctggtcctatgctggtcctgcagcctggc
taattagatcaccggtgtaaagagacttgatgggcagaagacagagcaaa
gtacagtggctcagaggaccaggcctgccagacttaacaggtagtgaaaa
gactgattcctgctagggttggagatattctggaaagatcttccatttca
ccctcttccccttcttctttacacagagtcatgtctctgatcatgttcag
ggcacaggttttaattcttcaaagacaaatctggcataccaagccaacaa
gtgttactgagagaggatagaaaatattgtccatgatgtcacccatcatt
tcttcttgcctctttttttattgtgttttccccgaccatgtcagactcta
ggctagatttcaaaatacaaaataaccttgatggatacttctgagagata
atccaggagttatcaaatatttctggaagtaatgagtgcaactttgaagt
tccagtgttatggttaaagaggaacagggtaggggttgggggggaagaga
agagaatcatgctagcctggcttttctaaaacaaattacattttgttatt
aaaacaaaaagtagtaatgtaaggattgctaaatgatggtgggttaattt
cactgtgtgaa
gaattcctggcttcctggcttggctagagctctaacattccagctgggcc
acatcaatcactctggctaaggaactactcctggatgaattcaccttaag
ccaagctaaagagactggtggaataatttgttctttaatgacatatagta
ttttttcattctgagattcattcctccctcccccagtgcagaaacttatg
ggctgttcagggatggagggtgttgagtctattcacttttcagaaaagtg
agacttttcacttttcttttttgcccttctatgtcctttctaagcatgct
tcccttaccagttggagttccctgatccatcaacagtttggcttccttgc
tcttccctctgtcctgtggctatgcctgccgtctgctgacctctatgtca
gcctaccaggatggctacttacctcctctcctctattatcctcctctggc
cagcagctgaagcttacatcttgtatctcctagggcttttagactataat
aaaattgttcttgaatttgagtccattctaacattcttttactaatttat
taataataaagtatttatttaaacaatttaaattcaatgatataataaaa
taatattttaataatttaatgttttattaacaataaataatttaataata
aaaatgataaaaataagatgtcttaaataaaataatttattaataaacaa
tatttatttatttatttataagactgagaacttagggaaacctaattttt
tttttttgcaccagtgtctgagaggaagaaaggaaggaaggaaggaagga
aggaagggaggaaggaaggaagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_16060007_16060765
seq2: B6Ng01-151I05.b_46_806 (reverse)

seq1  TTCACACAGTGAAA-TAACCCACCATCATTTAGCAATCCTTACCTTACTA  49
      |||||||||||||| |||||||||||||||||||||||||||| ||||||
seq2  TTCACACAGTGAAATTAACCCACCATCATTTAGCAATCCTTACATTACTA  50

seq1  CTTTTTG-TTTCATAACAAAATGTAATTTGTTTTAGAAAAGCCAGGCTAG  98
      ||||||| ||| ||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTGTTTTAATAACAAAATGTAATTTGTTTTAGAAAAGCCAGGCTAG  100

seq1  CATGATTCTCTTCTCTTCCCCCCCAACCCCTACCCTGTTCCTCTTTAACC  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGATTCTCTTCTCTTCCCCCCCAACCCCTACCCTGTTCCTCTTTAACC  150

seq1  ATAACACTGGAACTTCAAAGTTGCACTCATTACTTCCAGAAATATTTGAT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACACTGGAACTTCAAAGTTGCACTCATTACTTCCAGAAATATTTGAT  200

seq1  AACTCCTGGATTATCTCTCAGAAGTATCCATCAAGGTTATTTTGTATTTT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCCTGGATTATCTCTCAGAAGTATCCATCAAGGTTATTTTGTATTTT  250

seq1  GAAATCTAGCCTAGAGTCTGACATGGTCGGGGAAAACACAATAAAAAAAG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATCTAGCCTAGAGTCTGACATGGTCGGGGAAAACACAATAAAAAAAG  300

seq1  AGGCAAGAAGAAATGATGGGTGACATCATGGACAATATTTTCTATCCTCT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAAGAAGAAATGATGGGTGACATCATGGACAATATTTTCTATCCTCT  350

seq1  CTCAGTAACACTTGTTGGCTTGGTATGCCAGATTTGTCTTTGAAGAATTA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTAACACTTGTTGGCTTGGTATGCCAGATTTGTCTTTGAAGAATTA  400

seq1  AAACCTGTGCCCTGAACATGATCAGAGACATGACTCTGTGTAAAGAAGAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCTGTGCCCTGAACATGATCAGAGACATGACTCTGTGTAAAGAAGAA  450

seq1  GGGGAAGAGGGTGAAATGGAAGATCTTTCCAGAATATCTCCAACCCTAGC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAAGAGGGTGAAATGGAAGATCTTTCCAGAATATCTCCAACCCTAGC  500

seq1  AGGAATCAGTCTTTTCACTACCTGTTAAGTCTGGCAGGCCTGGTCCTCTG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATCAGTCTTTTCACTACCTGTTAAGTCTGGCAGGCCTGGTCCTCTG  550

seq1  AGCCACTGTACTTTGCTCTGTCTTCTGCCCATCAAGTCTCTTTACACCGG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCACTGTACTTTGCTCTGTCTTCTGCCCATCAAGTCTCTTTACACCGG  600

seq1  TGATCTAATTAGCCAGGCTGCAGGACCAGCATAGGACCAGGCAGGCTCAC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCTAATTAGCCAGGCTGCAGGACCAGCATAGGACCAGGCAGGCTCAC  650

seq1  TTGGCTCGTTAAAAGTTCCCAGTCTCCTGCTTGGGAAATTGTTCTCTAGT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCTCGTTAAAAGTTCCCAGTCTCCTGCTTGGGAAATTGTTCTCTAGT  700

seq1  TTTACCAGAGCTGTTTGCCTTTTGCAGATCTCAGGGGAGAGAGGCAGAGC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACCAGAGCTGTTTGCCTTTTGCAGATCTCAGGGGAGAGAGGCAGAGC  750

seq1  TAGTTGAATTC  759
      |||||||||||
seq2  TAGTTGAATTC  761

seq1: chr12_15855518_15856340
seq2: B6Ng01-151I05.g_71_894

seq1  GAATTCCTGGCTTCCTGGCTTGGCTAGAGCTCTAACATTCCAGCTGGGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGGCTTCCTGGCTTGGCTAGAGCTCTAACATTCCAGCTGGGCC  50

seq1  ACATCAATCACTCTGGCTAAGGAACTACTCCTGGATGAATTCACCTTAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCAATCACTCTGGCTAAGGAACTACTCCTGGATGAATTCACCTTAAG  100

seq1  CCAAGCTAAAGAGACTGGTGGAATAATTTGTTCTTTAATGACATATAGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGCTAAAGAGACTGGTGGAATAATTTGTTCTTTAATGACATATAGTA  150

seq1  TTTTTTCATTCTGAGATTCATTCCTCCCTCCCCCAGTGCAGAAACTTATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCATTCTGAGATTCATTCCTCCCTCCCCCAGTGCAGAAACTTATG  200

seq1  GGCTGTTCAGGGATGGAGGGTGTTGAGTCTATTCACTTTTCAGAAAAGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGTTCAGGGATGGAGGGTGTTGAGTCTATTCACTTTTCAGAAAAGTG  250

seq1  AGACTTTTCACTTTTCTTTTTTGCCCTTCTATGTCCTTTCTAAGCATGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTTTCACTTTTCTTTTTTGCCCTTCTATGTCCTTTCTAAGCATGCT  300

seq1  TCCCTTACCAGTTGGAGTTCCCTGATCCATCAACAGTTTGGCTTCCTTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTACCAGTTGGAGTTCCCTGATCCATCAACAGTTTGGCTTCCTTGC  350

seq1  TCTTCCCTCTGTCCTGTGGCTATGCCTGCCGTCTGCTGACCTCTATGTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCCTCTGTCCTGTGGCTATGCCTGCCGTCTGCTGACCTCTATGTCA  400

seq1  GCCTACCAGGATGGCTACTTACCTCCTCTCCTCTATTATCCTCCTCTGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTACCAGGATGGCTACTTACCTCCTCTCCTCTATTATCCTCCTCTGGC  450

seq1  CAGCAGCTGAAGCTTACATCTTGTATCTCCTAGGGCTTTTAGACTATAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGCTGAAGCTTACATCTTGTATCTCCTAGGGCTTTTAGACTATAAT  500

seq1  AAAATTGTTCTTGAATTTGAGTCCATTCTAACATTCTTTTACTAATTTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTGTTCTTGAATTTGAGTCCATTCTAACATTCTTTTACTAATTTAT  550

seq1  TAATAATAAAGTATTTATTTAAACAATTTAAATTCAATGATATAATAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAATAAAGTATTTATTTAAACAATTTAAATTCAATGATATAATAAAA  600

seq1  TAATATTTTAATAATTTAATGTTTTATTAACAATAAATAATTTAATAATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATTTTAATAATTTAATGTTTTATTAACAATAAATAATTTAATAATA  650

seq1  AAAATGAT-AAAATAAGATGTCTTAAATAAAATAATTTATTAATAAACAA  699
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGATAAAAATAAGATGTCTTAAATAAAATAATTTATTAATAAACAA  700

seq1  TATTTATTTATTTATTTATAAGACTGAGAACTTAGGGAAACCTAATTTTT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATTTATTTATTTATAAGACTGAGAACTTAGGGAAACCTAATTTTT  750

seq1  TTTTTTTGCACCAGTGTCTGAGAGGAAGAAAGGAAGGAAGGAAGGAAGGA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTGCACCAGTGTCTGAGAGGAAGAAAGGAAGGAAGGAAGGAAGGA  800

seq1  AGGAAGGGAGGAAGGAAGGAAGGA  823
      ||||||||||||||||||||||||
seq2  AGGAAGGGAGGAAGGAAGGAAGGA  824