BAC Information

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BAC

Clone NameB6Ng01-152F18
Chromosome12 (Build37)
Map Location 97,381,269 - 97,382,372
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC667688, Flrt2, 1700019M22Rik
Downstream geneLOC100039664, EG628277
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-152F18.bB6Ng01-152F18.g
ACCDH947953DH947954
length1,2261,088
definitionDH947953|Mus musculus domesticus DNA, BAC clone: B6Ng01-152F18, 5' end.DH947954|Mus musculus domesticus DNA, BAC clone: B6Ng01-152F18, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaacaatgtaatccactatataaataaattcaaagaagaaaaaa
atacatgattatttcattagatgctgaaaaatcatttgacaaaattcaac
atcccttcatggtaaatgtcttggaaagattagaaattcaaggcccatac
ctaaacaaagtagaaacaatatagagcaaaccagtagccaacatcaaact
aaatggagagaaacttgaagcagttctactaaaatcagggactagacaag
gcttcccactctctccatacctattcaatataatactcaaagtcctagct
agatcaattagaaaacaaaagtaggttaaagggatccaaattggaaagga
agaagtcaaatatcactgtgtgcagatggtatgatagtatgcttaaggga
ccccaaaattccaccagagaactcgtaaacctgataaacaacttcagcaa
agaggttggaaataaaattaacgcaaacaaatcagtagtcttcctctact
cgggctgagaaagaaattagggaaataacagttttcacaaataatataaa
atacaaataatgtaaaataccttggtgtgactctaaccaagcaagtgaaa
gatctgcatgacaagaacttcaaatcactgaagaaagaagtcagagaaga
ccttagcagatggaaagatctcccatgcttgtggattggcaggattaata
tagtaaaaatggccatcttgctgaaagcaatctccagtttcagtgctatc
cccatcaaaattccaactgaattcttcatagagttagaaatagcaatttg
caaattcatttggaataacaacaacaacaacaacaaaaacaggatagtga
aaactatgctcaatacttaaagaacttctaggggaatcaccatccctgac
ctcaagctgtattacagggcaatagtaataataactgtatggtattggta
caattgtcaggtagatcaatggaaaagaattgagatccagaaatgaaacc
acacatgtatggccacttgaactttgacaagagctaaaccacccagtgaa
aaatacatttcaacaatggtgcttattcactggcagttcagcatgtagaa
gaatgcaaattgatcattcttatctccttttacaaaacacaaagttcagt
gactcccataaattagaataaaccagggctacaagaaacgtttttggaaa
caaaccaaacgaaaaaactaacctac
gaattctcagttgttaatgtgaatatttagctaccttttctaactttcag
tttacagacatcacatatgagaattaagagcatgagaatatgaattttta
aattacaaaaaaatacccagaacttggcagatgtttttaaatatatgtag
taaacatctgataaaattattaggcaaaagcactctccttctcatatgtg
aacctctatactaaagccccatcccccaaaaggagcaacctcagacagat
tacttcccctaacatcaaggaattttgtggctggtcacatgaatgcaata
gaaagactcatcattttcattaccaggtcattatgaagctaccacagagc
caatccatattaaacaggagaagaattaaaccttaattctttgtggaagg
gaataataattgatttgtggcccacttaacccactgcagtctccgtcctg
gttgaaacttattcatattcttgatgagtaaaatataggtatcccacttc
aaaatctccagagtctcacttaattacactcccaggtataaggactatgt
cagatcatctaaatctggttcacaaggagaagcaaatcctgaggagatgc
tcatatcaatgtaaagatgggcatggaaaaggagaaacaagttgaataaa
gtgcagcctgtaagagtgcttgctccacaagcaagatgacctgaattcaa
atttccagtaaccacatagaaagtgtgtcttctttctgagcacctgtaac
atcagtactgttgggtctagtgacaaaaggatcactggggcttgctaggg
tcaagtgcagatactgtctggctagaatgctatggaaagggatagaatta
gaagactcacagttctcctctagccaccacacgtgtatacggatgcacaa
tacaaatacacacacacacacacacaaataaatatttattctaaatcttt
aatataggtagactcttagacatgtataggaatctatcgtagtctcttca
taaaagaggaggatacgtatattctagatgatgtctcaacattctgaaag
aagaatagaaccatcaagattttaaggccagttgatcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_97381269_97382372
seq2: B6Ng01-152F18.g_66_1153 (reverse)

seq1  GGATCAAACTGGGCCTTAAAATCTGTGGAATGTGTCTAT--CTCTCTCAG  48
      ||||| |||| ||||||||||||| ||  |||  |||||   ||| ||||
seq2  GGATC-AACT-GGCCTTAAAATCT-TG--ATGGTTCTATTCTTCTTTCAG  45

seq1  AATTGTTGGAGACCATCATCTAGAATATACGTATCCTTCCTCTTTTATGA  98
      || |||| |||| ||||||||||||||||||||||| |||||||||||||
seq2  AA-TGTT-GAGA-CATCATCTAGAATATACGTATCC-TCCTCTTTTATGA  91

seq1  AAGGAGAACTACGATAGATTTCCTATACATGTCTTAAGAGTCTACCTATA  148
      |  ||| ||||||||||| |||||||||||||| ||||||||||||||||
seq2  A--GAG-ACTACGATAGA-TTCCTATACATGTC-TAAGAGTCTACCTATA  136

seq1  TTTTAAAGAATTTAGAATAAATATTTTATTTGTGTGTGTGTGTGTGTGTA  198
        |||||| |||||||||||||| ||||||||||||||||||||||||||
seq2  --TTAAAG-ATTTAGAATAAATA-TTTATTTGTGTGTGTGTGTGTGTGTA  182

seq1  TTTGTATTGTGCATCCGTATACACGTGTGGTGGCTAGAGGAGAACTGTGA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTATTGTGCATCCGTATACACGTGTGGTGGCTAGAGGAGAACTGTGA  232

seq1  GTCTTCTAATTCTATCCCTTTCCATAGCATTCTAGCCAGACAGTATCTGC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTCTAATTCTATCCCTTTCCATAGCATTCTAGCCAGACAGTATCTGC  282

seq1  ACTTGACCCTAGCAAGCCCCAGTGATCCTTTTGTCACTAGACCCAACAGT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGACCCTAGCAAGCCCCAGTGATCCTTTTGTCACTAGACCCAACAGT  332

seq1  ACTGATGTTACAGGTGCTCAGAAAGAAGACACACTTTCTATGTGGTTACT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGATGTTACAGGTGCTCAGAAAGAAGACACACTTTCTATGTGGTTACT  382

seq1  GGAAATTTGAATTCAGGTCATCTTGCTTGTGGAGCAAGCACTCTTACAGG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATTTGAATTCAGGTCATCTTGCTTGTGGAGCAAGCACTCTTACAGG  432

seq1  CTGCACTTTATTCAACTTGTTTCTCCTTTTCCATGCCCATCTTTACATTG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCACTTTATTCAACTTGTTTCTCCTTTTCCATGCCCATCTTTACATTG  482

seq1  ATATGAGCATCTCCTCAGGATTTGCTTCTCCTTGTGAACCAGATTTAGAT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGAGCATCTCCTCAGGATTTGCTTCTCCTTGTGAACCAGATTTAGAT  532

seq1  GATCTGACATAGTCCTTATACCTGGGAGTGTAATTAAGTGAGACTCTGGA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTGACATAGTCCTTATACCTGGGAGTGTAATTAAGTGAGACTCTGGA  582

seq1  GATTTTGAAGTGGGATACCTATATTTTACTCATCAAGAATATGAATAAGT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTGAAGTGGGATACCTATATTTTACTCATCAAGAATATGAATAAGT  632

seq1  TTCAACCAGGACGGAGACTGCAGTGGGTTAAGTGGGCCACAAATCAATTA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACCAGGACGGAGACTGCAGTGGGTTAAGTGGGCCACAAATCAATTA  682

seq1  TTATTCCCTTCCACAAAGAATTAAGGTTTAATTCTTCTCCTGTTTAATAT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCCCTTCCACAAAGAATTAAGGTTTAATTCTTCTCCTGTTTAATAT  732

seq1  GGATTGGCTCTGTGGTAGCTTCATAATGACCTGGTAATGAAAATGATGAG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTGGCTCTGTGGTAGCTTCATAATGACCTGGTAATGAAAATGATGAG  782

seq1  TCTTTCTATTGCATTCATGTGACCAGCCACAAAATTCCTTGATGTTAGGG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTATTGCATTCATGTGACCAGCCACAAAATTCCTTGATGTTAGGG  832

seq1  GAAGTAATCTGTCTGAGGTTGCTCCTTTTGGGGGATGGGGCTTTAGTATA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTAATCTGTCTGAGGTTGCTCCTTTTGGGGGATGGGGCTTTAGTATA  882

seq1  GAGGTTCACATATGAGAAGGAGAGTGCTTTTGCCTAATAATTTTATCAGA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTTCACATATGAGAAGGAGAGTGCTTTTGCCTAATAATTTTATCAGA  932

seq1  TGTTTACTACATATATTTAAAAACATCTGCCAAGTTCTGGGTATTTTTTT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTACTACATATATTTAAAAACATCTGCCAAGTTCTGGGTATTTTTTT  982

seq1  GTAATTTAAAAATTCATATTCTCATGCTCTTAATTCTCATATGTGATGTC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTTAAAAATTCATATTCTCATGCTCTTAATTCTCATATGTGATGTC  1032

seq1  TGTAAACTGAAAGTTAGAAAAGGTAGCTAAATATTCACATTAACAACTGA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAACTGAAAGTTAGAAAAGGTAGCTAAATATTCACATTAACAACTGA  1082

seq1  GAATTC  1104
      ||||||
seq2  GAATTC  1088