BAC Information

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BAC

Clone NameB6Ng01-152F20
Chromosome12 (Build37)
Map Location 52,081,266 - 52,082,188
singlet/doubletsinglet
Overlap genenone
Upstream genePrkcm
Downstream geneLOC100039517, LOC636070, LOC100039525, 6030408C04Rik, Scfd1, LOC620390, LOC100039578, Coch, Strn3, Ap4s1, Hectd1, EG544864, LOC100039476, Heatr5a, LOC676784
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-152F20.bB6Ng01-152F20.g
ACCDH947957DH947958
length1,070821
definitionDH947957|Mus musculus domesticus DNA, BAC clone: B6Ng01-152F20, 5' end.DH947958|Mus musculus domesticus DNA, BAC clone: B6Ng01-152F20, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaacttagtgttattttcacatcgttcagtcaaacttagccagag
ttccaacgccctacttaaaattcaactagaaagttacctaccaagtacta
attagcattataaagtcagagtctgcagctccaggcctttcagttgttta
ctagaaaggacagtcttaagccagatacagtttaccataagaaaagttaa
agattcccagtgaagcaagttttttctttagccctagattccaggcagaa
ctattgagcatagataattttcccccctcaggccagctttttcttttttt
ttattttgttaataatagggaggagatgtagtctcccctcccccagcctg
aaacctgcttgctcggggtggagcttcctgctcattcgttctgccacgcc
cactgctggaacctgaggagccacacacgtgcacctttctactggaccag
agattattcggcgggaatcgggtcccctcccccttccttcataactagtg
tcccaacaataaaatttgagccttgatcagagtaactgtcttggctacat
ttcttcttttgccccgtctagattcctctcttacagctcgagcggccttc
tcagtcgaaccgttcacgttgcgagctgctggcggccgcaacatgtattt
aatacaaaactaatttaaacaaattaaagaggcctcattggagtccaaac
ttgggtgtgatgaggaaatagtctacttcttcgttatgtgttagaccctt
tagcatagcttctccccaaagaattccattctcagaatattctctctttc
tgcccatgccttgtgatccctttaagtgaaagtgtacctccatccaagct
gcctagagggacacagaggacacaaacctgcagcaggggttttcccgagt
attcagtgggcagtgtggttctctgggcaataaaagaaaagtgtgtgatt
cttattttcacctggcagtgaagaaaatcggagtgtttgaaaaaaaaaaa
aaaactgctgtgtcaacacgtgtcaaatgaaaatagtacaattagaagtc
aaatccaccctgtttttcaa
gaattctgttgcttacgttcttatgcttgcttcctaccatctgaatatct
ctagtgctacctgccctcactatctcactggagcctgttcatcctgtaat
cctggttgtggcagaactcctcatagtccagctgtctctgtgatcctgag
attctgggtgtgtcagagttcctgggaatcaagttgcctctgggaccctg
ggatcctggtgtgaccaagctattgtgatcctgtgatcctgtgatcctgt
gatcctggctgtgttagctcacctgggatttaagccgcctctgagtgccg
tgggacttctgcagagtttgtgcccaaggtaaactggtgcaaatcagatg
gaacctgagcctctagtctggcggggttcttgcgtccctggttcctgctg
gtcccagttactcccagtggtgttggaacagatgtgtcctactcacccct
gatcccaagatcctggacatgttagagtgcctgggagtggagcctccttt
gggtgctgtgggactggctgcagagttcgtgcccacggtaaactggtgcc
cttactttggatgttagcttttaaatgtttaatttttgctaccatctgaa
taagcacagaggttaggtacctagtaaatgactaggaagcagaaaaggat
ctttaatagaaggggaaaatagaatagcatgttatggagagacaaaggga
aaactagaatagaaaattaaatagcgagggccatggggagagaagggaaa
aggtgggaatatgggggaggaacagcttacactatatgatgtttgtacac
tgcatggaaacctgctgttgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_52081266_52082188
seq2: B6Ng01-152F20.b_192_1111

seq1  TTTACTAGAAAGGACAGTCTTAAGCCAGATACAGTTTACCATAAGAAAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTAGAAAGGACAGTCTTAAGCCAGATACAGTTTACCATAAGAAAAG  50

seq1  TTAAAGATTCCCAGTGAAGCAAGTTTTTTCTTTAGCCCTAGATTCCAGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGATTCCCAGTGAAGCAAGTTTTTTCTTTAGCCCTAGATTCCAGGC  100

seq1  AGAACTATTGAGCATAGATAATTTTCCCCCCTCAGGCCAGCTTTTTCTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTATTGAGCATAGATAATTTTCCCCCCTCAGGCCAGCTTTTTCTTT  150

seq1  TTTTTTATTTTGTTAATAATAGGGAGGAGATGTAGTCTCCCCTCCCCCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTATTTTGTTAATAATAGGGAGGAGATGTAGTCTCCCCTCCCCCAG  200

seq1  CCTGAAACCTGCTTGCTCGGGGTGGAGCTTCCTGCTCATTCGTTCTGCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAAACCTGCTTGCTCGGGGTGGAGCTTCCTGCTCATTCGTTCTGCCA  250

seq1  CGCCCACTGCTGGAACCTGAGGAGCCACACACGTGCACCTTTCTACTGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCCACTGCTGGAACCTGAGGAGCCACACACGTGCACCTTTCTACTGGA  300

seq1  CCAGAGATTATTCGGCGGGAATCGGGTCCCCTCCCCCTTCCTTCATAACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGATTATTCGGCGGGAATCGGGTCCCCTCCCCCTTCCTTCATAACT  350

seq1  AGTGTCCCAACAATAAAATTTGAGCCTTGATCAGAGTAACTGTCTTGGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTCCCAACAATAAAATTTGAGCCTTGATCAGAGTAACTGTCTTGGCT  400

seq1  ACATTTCTTCTTTTGCCCCGTCTAGATTCCTCTCTTACAGCTCGAGCGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTCTTCTTTTGCCCCGTCTAGATTCCTCTCTTACAGCTCGAGCGGC  450

seq1  CTTCTCAGTCGAACCGTTCACGTTGCGAGCTGCTGGCGGCCGCAACATGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCAGTCGAACCGTTCACGTTGCGAGCTGCTGGCGGCCGCAACATGT  500

seq1  ATTTAATACAAAACTAATTTAAACAAATTAAAGAGGCCTCATTGGAGTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAATACAAAACTAATTTAAACAAATTAAAGAGGCCTCATTGGAGTCC  550

seq1  AAACTTGGGTGTGATGAGGAAATAGTCTACTTCTTCGTTATGTGTTAGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTGGGTGTGATGAGGAAATAGTCTACTTCTTCGTTATGTGTTAGAC  600

seq1  CCTTTAGCATAGCTTCTCCCCAAAGAATTCCATTCTCAGAATATTCTCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTAGCATAGCTTCTCCCCAAAGAATTCCATTCTCAGAATATTCTCTC  650

seq1  TTTCTGCCCATGCCTTGTGATCCCTTTAAGTGAAAGTGTACCTCCATCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGCCCATGCCTTGTGATCCCTTTAAGTGAAAGTGTACCTCCATCCA  700

seq1  AGCTGCCTAGAGGGACACAGAGGACACAAACCTGCAGCAGGGGTTTCCCC  750
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AGCTGCCTAGAGGGACACAGAGGACACAAACCTGCAGCAGGGGTTTTCCC  750

seq1  GAGTATGCAGTGGGCAGTGTGGTTCTCTGGGCAATAAAAGAAAAAGTGTG  800
      |||||| ||||||||||||||||||||||||||||||||| |||||||||
seq2  GAGTATTCAGTGGGCAGTGTGGTTCTCTGGGCAATAAAAG-AAAAGTGTG  799

seq1  TGATTCTTATTTTCA-CTGGCAGTGAAGAAAATCGGAGTGTTTGAAAAAA  849
      ||||||||||||||| |||||||||||||||||||||||||||| |||||
seq2  TGATTCTTATTTTCACCTGGCAGTGAAGAAAATCGGAGTGTTTG-AAAAA  848

seq1  AAAAAAAAAACTGCTGTGGTCAACAACGTGTCAAATGAAAATATGTACAA  899
      ||||||||||||||||| |||||| |||||||||||||||||| ||||||
seq2  AAAAAAAAAACTGCTGT-GTCAAC-ACGTGTCAAATGAAAATA-GTACAA  895

seq1  TTAGAAGTCAAAT-CACACTGTTTT  923
      ||||||||||||| ||| |||||||
seq2  TTAGAAGTCAAATCCACCCTGTTTT  920