BAC Information

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BAC

Clone NameB6Ng01-152G20
Chromosome12 (Build37)
Map Location 66,687,510 - 66,854,434
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC623123, LOC217645, LOC217647, Gm527, Klhl28, A430041B07Rik, Prpf39, Fkbp3, Fancm, C79407, Wdr20b
Downstream geneLOC100040700, EG238217, Mdga2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-152G20.bB6Ng01-152G20.g
ACCDH948003DH948004
length1,0501,087
definitionDH948003|Mus musculus domesticus DNA, BAC clone: B6Ng01-152G20, 5' end.DH948004|Mus musculus domesticus DNA, BAC clone: B6Ng01-152G20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(66,687,510 - 66,688,564)(66,853,354 - 66,854,434)
sequence
gaattcaatatggttttctattgtagcaaatgataatgatgtacatggct
acatatctgaaaatacccggtgaattgtttctttggcaaaacttaagaca
ctagaattgctgaagcttgataagatttacagataatttaattttatctt
taagacaagttttccaaaagagataggtcttatcaagtgataaatcagaa
atgatccatagtaattccctgaaacttaaattgaatgtggtagtaggttc
ttttgtgtctcaataacatttaaactgtcacaaggataatttgcctctta
taagaagcactggatagatatgttatatcctcttaaaatgaatgaaaaag
tttggtcattctcctgggatgttttctccaagtctggtaaaaaagaaatg
actggtatcatgtctggacaaaaatatctatggtgtgggagctcatagac
tccagggatgatcctactactattgttctaataaatggacatagttttaa
actcctcctatattctcatttcatctcctcaccattccaaagttgtcctc
tagtcttgatcatgctccagtatgtggtctcatactagtgagtatacagg
aattgtaaattgaacttggtagattttcaaagcaactacacaaaaggaca
taaagttgagagcaagtgagcgtgagctctggatctgggtggagaattag
tgatggagtgggagtaactatgattcaaatacattgcgtgtgtgtgtgaa
attctccgagttaataaaatgcaatatcaacaaatcaaaattatataatt
cttcatctcttttgttttagatcagttttcttaatgcataggacccacat
aagactgtgtatctactgatatggcagcagtatattagaggaggctatga
tggacactttcacagatattgcttttgtcagcagcttatttttttaagat
attattaagtacatgagttgatgtcaggcagaattaagctgaaaaatgcc
tgccagaagccattgaacctaggttaacctagcaggtggccttgtggagg

gaattctctttgttttaaaaatggtattagccaaacttatgtactgtcat
tttctaattcatacaccaggatccaaatgtaatggcattccctgttatct
ttctccctccttgggtcttgacacaaatcacttatttcttcactcaagag
aaatcacaactcccaaatatctaccatttctttacttccttgttacactt
gacatctacattcagttattcctttggtgatatcctacaaatcaaaacat
gatgcttctctactgggcacaactacaagcagctatttatcttactacta
actcttttaataatctttctgatatccccccttctgttctgtgatctatg
taaaaatcaaaaagatttccctaatcatgatatatagaactatctctttc
atgtctactacttattatttaggttatattgcattaatcttcataataat
taaccatttaaagtattactatttaaaatattattttgttcactttcttc
tggatttttaactattactacagagcacataataaatggtaaaaatgttt
aatatgtgacaagtttattaatatatattttgtgtagtacacactttaat
ctcagcactttggacgttcaagtaggaagatctgagtttaaagtcaggtt
tggcttcatagaaataccctgtctcaaaaaggaacaaatcaataaataaa
ataactcttcctttctacaaaatgaggttatgacatgaagaaagctatcc
ataaatcagaaaatgtgctcacagtcaacactgagttttgctgacatctt
gatcttggattttctagcctcctgaacattgagaaatgaggattctgtgg
ttttgtaagagatcctttttctgtcttttaaacaagtctgcacaactgac
aatgtttgcaatgtgttctttatctattaaggtagcaagatctctccagt
gtgtttttttctgattctaagaagaactaacttccccttcaaacttgata
tggtggttgcttttattttcaacattaggccgtttgtttcagagtacctg
gtttaaaaagctttggtttctcctgttgttattttga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_66687510_66688564
seq2: B6Ng01-152G20.b_45_1094

seq1  GAATTCAATATGGTTTTCTATTGTAGCAAATGATAATGATGTACATGGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATATGGTTTTCTATTGTAGCAAATGATAATGATGTACATGGCT  50

seq1  ACATATCTGAAAATACCCGGTGAATTGTTTCTTTGGCAAAACTTAAGACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATCTGAAAATACCCGGTGAATTGTTTCTTTGGCAAAACTTAAGACA  100

seq1  CTAGAATTGCTGAAGCTTGATAAGATTTACAGATAATTTAATTTTATCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAATTGCTGAAGCTTGATAAGATTTACAGATAATTTAATTTTATCTT  150

seq1  TAAGACAAGTTTTCCAAAAGAGATAGGTCTTATCAAGTGATAAATCAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGACAAGTTTTCCAAAAGAGATAGGTCTTATCAAGTGATAAATCAGAA  200

seq1  ATGATCCATAGTAATTCCCTGAAACTTAAATTGAATGTGGTAGTAGGTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATCCATAGTAATTCCCTGAAACTTAAATTGAATGTGGTAGTAGGTTC  250

seq1  TTTTGTGTCTCAATAACATTTAAACTGTCACAAGGATAATTTGCCTCTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTGTCTCAATAACATTTAAACTGTCACAAGGATAATTTGCCTCTTA  300

seq1  TAAGAAGCACTGGATAGATATGTTATATCCTCTTAAAATGAATGAAAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAGCACTGGATAGATATGTTATATCCTCTTAAAATGAATGAAAAAG  350

seq1  TTTGGTCATTCTCCTGGGATGTTTTCTCCAAGTCTGGTAAAAAAGAAATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTCATTCTCCTGGGATGTTTTCTCCAAGTCTGGTAAAAAAGAAATG  400

seq1  ACTGGTATCATGTCTGGACAAAAATATCTATGGTGTGGGAGCTCATAGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGTATCATGTCTGGACAAAAATATCTATGGTGTGGGAGCTCATAGAC  450

seq1  TCCAGGGATGATCCTACTACTATTGTTCTAATAAATGGACATAGTTTTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGGATGATCCTACTACTATTGTTCTAATAAATGGACATAGTTTTAA  500

seq1  ACTCCTCCTATATTCTCATTTCATCTCCTCACCATTCCAAAGTTGTCCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCTCCTATATTCTCATTTCATCTCCTCACCATTCCAAAGTTGTCCTC  550

seq1  TAGTCTTGATCATGCTCCAGTATGTGGTCTCATACTAGTGAGTATACAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCTTGATCATGCTCCAGTATGTGGTCTCATACTAGTGAGTATACAGG  600

seq1  AATTGTAAATTGAACTTGGTAGATTTTCAAAGCAACTACACAAAAGGACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTAAATTGAACTTGGTAGATTTTCAAAGCAACTACACAAAAGGACA  650

seq1  TAAAGTTGAGAGCAAGTGAGCGTGAGCTCTGGATCTGGGTGGAGAATTAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTTGAGAGCAAGTGAGCGTGAGCTCTGGATCTGGGTGGAGAATTAG  700

seq1  TGATGGAGTGGGAGTAACTATGATTCAAATACATTGCGTGTGTGTGTGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGGAGTGGGAGTAACTATGATTCAAATACATTGCGTGTGTGTGTGAA  750

seq1  ATTCTCCGAGTTAATAAAATGCAATATCAACAAATCAAAATTATATAATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCCGAGTTAATAAAATGCAATATCAACAAATCAAAATTATATAATT  800

seq1  CTTCATCTCTTTTGTTTTAGATCAGTTTTCTTAATGCATAGGACCCACAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATCTCTTTTGTTTTAGATCAGTTTTCTTAATGCATAGGACCCACAT  850

seq1  AAGACTGTGTATCTACTGATATGGCAGCAGTATATTAGAGGAGGCTATGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTGTGTATCTACTGATATGGCAGCAGTATATTAGAGGAGGCTATGA  900

seq1  TGGACACTTTCACAGATATTTGCTTTTGTCAGCAGCTTTATTTTTGTTAA  950
      |||||||||||||||||| ||||||||||||||||| |||||||  || |
seq2  TGGACACTTTCACAGATA-TTGCTTTTGTCAGCAGC-TTATTTT--TTTA  946

seq1  AGATATTATTAGGTACATGAGTTGATGTCAGGCAG-ATATAGCTGAAAAC  999
      ||||||||||| ||||||||||||||||||||||| ||  ||||||||| 
seq2  AGATATTATTAAGTACATGAGTTGATGTCAGGCAGAATTAAGCTGAAAA-  995

seq1  ATGCCTGCCAGGAGCCATTGAAGCTAGGTTAAGCTAGCAGGTGGCCTTGT  1049
      ||||||||||| |||||||||| ||||||||| |||||||||||||||| 
seq2  ATGCCTGCCAGAAGCCATTGAACCTAGGTTAACCTAGCAGGTGGCCTTG-  1044

seq1  TGGAGG  1055
      ||||||
seq2  TGGAGG  1050

seq1: chr12_66853354_66854434
seq2: B6Ng01-152G20.g_69_1155 (reverse)

seq1  TCAAAATAACAACAGG-GAAACAAAAGCTTTAT-AACCAGTAGCTCTGAA  48
      |||||||||||||||| ||||| |||||||| | ||||||   |||||||
seq2  TCAAAATAACAACAGGAGAAACCAAAGCTTTTTAAACCAGGTACTCTGAA  50

seq1  AC-AACTGCAT-ATG-TGAAAATAAAGACAAACCACATATCAAGTTTTGA  95
      || ||| || | ||| ||||||||||  ||| |  ||||||||||||  |
seq2  ACAAACGGCCTAATGTTGAAAATAAAAGCAACCACCATATCAAGTTTGAA  100

seq1  AGGGAAG-TAG-TCTTCTTAGAATCAGAAAAAAACACACTGAAGAGAATC  143
       |||||| ||| ||||||||||||||||||||||||||||| |||| |||
seq2  GGGGAAGTTAGTTCTTCTTAGAATCAGAAAAAAACACACTGGAGAG-ATC  149

seq1  TTGCTACCTTAAATAGATAAAGAACACATTGCAAACATTGTCAGTTTGTG  193
      |||||||||| ||||||||||||||||||||||||||||||||| |||||
seq2  TTGCTACCTT-AATAGATAAAGAACACATTGCAAACATTGTCAG-TTGTG  197

seq1  CAGACTGTTCTAAAAGACAGAAAATGGATCTCTTAC-AAACCACAGAATC  242
      ||||||  | |||||||||||||| ||||||||||| |||||||||||||
seq2  CAGACTTGTTTAAAAGACAGAAAAAGGATCTCTTACAAAACCACAGAATC  247

seq1  CTCATTTCTCAATGTTCAGGAGGCTAGGAAATCCAAGATCAAGATGTCAG  292
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  CTCATTTCTCAATGTTCAGGAGGCTAGAAAATCCAAGATCAAGATGTCAG  297

seq1  C-AAACTCAGTGTTGACTGTGAGCACATTTTCTGATTTATGGATAGCTTT  341
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACTCAGTGTTGACTGTGAGCACATTTTCTGATTTATGGATAGCTTT  347

seq1  CTTCATGTCATAACCTCATTTTGTAGAAAGGAAGAGTTATTTTATTTATT  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATGTCATAACCTCATTTTGTAGAAAGGAAGAGTTATTTTATTTATT  397

seq1  GATTTGTTCCTTTTTGAGACAGGGTATTTCTATGAAGCCAAACCTGACTT  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGTTCCTTTTTGAGACAGGGTATTTCTATGAAGCCAAACCTGACTT  447

seq1  TAAACTCAGATCTTCCTACTTGAACGTCCAAAGTGCTGAGATTAAAGTGT  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTCAGATCTTCCTACTTGAACGTCCAAAGTGCTGAGATTAAAGTGT  497

seq1  GTACTACACAAAATATATATTAATAAACTTGTCACATATTAAACATTTTT  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTACACAAAATATATATTAATAAACTTGTCACATATTAAACATTTTT  547

seq1  ACCATTTATTATGTGCTCTGTAGTAATAGTTAAAAATCCAGAAGAAAGTG  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATTTATTATGTGCTCTGTAGTAATAGTTAAAAATCCAGAAGAAAGTG  597

seq1  AACAAAATAATATTTTAAATAGTAATACTTTAAATGGTTAATTATTATGA  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAATAATATTTTAAATAGTAATACTTTAAATGGTTAATTATTATGA  647

seq1  AGATTAATGCAATATAACCTAAATAATAAGTAGTAGACATGAAAGAGATA  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTAATGCAATATAACCTAAATAATAAGTAGTAGACATGAAAGAGATA  697

seq1  GTTCTATATATCATGATTAGGGAAATCTTTTTGATTTTTACATAGATCAC  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTATATATCATGATTAGGGAAATCTTTTTGATTTTTACATAGATCAC  747

seq1  AGAACAGAAGGGGGGATATCAGAAAGATTATTAAAAGAGTTAGTAGTAAG  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACAGAAGGGGGGATATCAGAAAGATTATTAAAAGAGTTAGTAGTAAG  797

seq1  ATAAATAGCTGCTTGTAGTTGTGCCCAGTAGAGAAGCATCATGTTTTGAT  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATAGCTGCTTGTAGTTGTGCCCAGTAGAGAAGCATCATGTTTTGAT  847

seq1  TTGTAGGATATCACCAAAGGAATAACTGAATGTAGATGTCAAGTGTAACA  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAGGATATCACCAAAGGAATAACTGAATGTAGATGTCAAGTGTAACA  897

seq1  AGGAAGTAAAGAAATGGTAGATATTTGGGAGTTGTGATTTCTCTTGAGTG  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGTAAAGAAATGGTAGATATTTGGGAGTTGTGATTTCTCTTGAGTG  947

seq1  AAGAAATAAGTGATTTGTGTCAAGACCCAAGGAGGGAGAAAGATAACAGG  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAATAAGTGATTTGTGTCAAGACCCAAGGAGGGAGAAAGATAACAGG  997

seq1  GAATGCCATTACATTTGGATCCTGGTGTATGAATTAGAAAATGACAGTAC  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGCCATTACATTTGGATCCTGGTGTATGAATTAGAAAATGACAGTAC  1047

seq1  ATAAGTTTGGCTAATACCATTTTTAAAACAAAGAGAATTC  1081
      ||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGTTTGGCTAATACCATTTTTAAAACAAAGAGAATTC  1087