BAC Information

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BAC

Clone NameB6Ng01-153L03
Chromosome12 (Build37)
Map Location 98,412,732 - 98,595,600
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100039664, EG628277
Downstream geneLOC382626, LOC100039743, LOC667732, LOC628351, LOC100039770, LOC667746, Galc, Gpr65
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-153L03.bB6Ng01-153L03.g
ACCDH948933DH948934
length1,127995
definitionDH948933|Mus musculus domesticus DNA, BAC clone: B6Ng01-153L03, 5' end.DH948934|Mus musculus domesticus DNA, BAC clone: B6Ng01-153L03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(98,594,469 - 98,595,600)(98,412,732 - 98,413,723)
sequence
gaattccaataatagctagttgtttttggaaatgtttgctttcaggtttc
aaagaaaacagagtaatacaattcttaggaaatgtgaatgcgaagaaaag
tatggccaagttggcaaagcaaaggtaaagtcaggtagtaatatgatatt
aaagtaatgtttggcatgttttgaaaatgatatttagaaaccattcaaac
atgggttagtattctgtagcagataaagataaatgagaaaagaagtactt
tctacaaaattgaaaaatatgatatttcataaggcttagaaaataaaagg
ctggactgtactctctgcacttgtgtttgtaacctgcccatcattctcag
aatcccgagaaaaaagtgtatatgtgaggtgtatatatatatatataaac
atttgaaaacagatttgaaaatttaagacatcatcttttattatgcttta
atttaaagcatagcacaatctcagacaagtttccttttctttcttttttt
taatgcatattttacaggtagcaagttttcttaaggacaaactgttattc
aaggtagccctcagcatgatgcttgggatttttgacttcctcttgaaggc
tacagtctatattgtgattcacactgttgccatctaatactcaacagagg
taacttacaggagaaaggcttttattttggctcaaggatcaatattcact
acagtagtgaggtcatgggagtagaatgacttctgtttatagtagtgggg
cactgtagtaagccatagactagtggcagttaggaagcatagctctaaga
gtagaatcagagtatatatatacacacacacacatatatcttttcactgt
ttaaccaggtagaaactcacctttattttttgtttttcgacacagggttt
ctctgtgtagccctggctgtcctggaactcactctgtagaccaggctggc
ctcgatctcagaaatctgcctgctctgcctcccgagtgctgggattaaag
gagtgcgccaccactattactgccatttgcaagtcctttctgaaaattgc
tttgaggagcacataagagttccaatttcccacctttatcctattatttc
cttgagtagaaagatatttagggaaat
gaattcagcttctttttttcctccaagactgaaatggtggggatagttgg
tatgatgatactgttaaacaactcccaccacagctaataaaaaagatatt
tgaaactactaaacactgatgcagggaattctatgcaactaaaatgcata
aagtagggctgaaattcctctgtgaaaagtaaattagttcttgtacaatt
ctgtacatggataaaaagttttctaatatttcgaccactctactcctttc
tatcttcctcacatccctgtgaattccctcttcaataaaaatctcctttc
ccacattaatatattttgtgcgtgaactgctaagcaaccagggcatggtt
tagacaaccctgatcttgacaagatgaggtattaaatgtatgttaatagg
tataaaacctgtgtatttgaaagtgctaatagcacaagaattctctaaga
ttctaaaagaaaataggaatatacttgctccatcagttttgtgagttctt
tttttaaatacttttattacatattttcctcaattacatttccaatgcta
tcccaaaagtcccccataccctccccacctcttccctacccacccattcc
catttttttggccctggcattcccctgtactggggcatatacagtttgca
tgtccaatgggcctctctttccagtgatggccgaataggccatcttttga
tacatatgcagctagagtcaagagctccggggtactggttagttcataat
gttgttccacctatagggttgaagatccctttagctctttggtactttct
ctagctcctccgttgggagccctgtgatccatccactagctgactgtgag
cactacttctgtgttttgctaggccccagcatagttctcataaaagacag
ctatatctgggttctttccaccaaattctttgcaattgttggcattggta
ttcagcgtttggaagctgattatggggggaatccctggattggca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_98594469_98595600
seq2: B6Ng01-153L03.b_48_1174 (reverse)

seq1  ATTTCCCTAAATATCTTCTTACTTACAAAAGAAATTAATA-GATAAAAGT  49
      |||||||||||||||||  ||||     ||| || ||||| |||||| ||
seq2  ATTTCCCTAAATATCTTTCTACT----CAAGGAAATAATAGGATAAAGGT  46

seq1  GGG-AATTTGAACTCTTATGTTGCTTCTTCAAAGCATTTTTCTGGAAGGA  98
      ||| |||| ||||||||||| ||| || |||||||| ||||| | |||||
seq2  GGGAAATTGGAACTCTTATG-TGC-TCCTCAAAGCAATTTTCAGAAAGGA  94

seq1  CTTGCAAATGGCAGTAATAGTGGTGGCGCACTCCTTTAATCCCAGCACTC  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCAAATGGCAGTAATAGTGGTGGCGCACTCCTTTAATCCCAGCACTC  144

seq1  GGGAGGCAGAGGCAGGCAGATTTCTGAGATCGAGGCCAGCCTGGTCTACA  198
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGCAGA-GCAGGCAGATTTCTGAGATCGAGGCCAGCCTGGTCTACA  193

seq1  GAGTGAGTTCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTGTCGAAA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGAGTTCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTGTCGAAA  243

seq1  AACAAAAAATAAAGGTGAGTTTCTACCTGGTTAAACAGTGAAAAGATATA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAAAATAAAGGTGAGTTTCTACCTGGTTAAACAGTGAAAAGATATA  293

seq1  TGTGTGTGTGTGTATATATATACTCTGATTCTACTCTTAGAGCTATGCTT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTATATATATACTCTGATTCTACTCTTAGAGCTATGCTT  343

seq1  CCTAACTGCCACTAGTCTATGGCTTACTACAGTGCCCCACTACTATAAAC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAACTGCCACTAGTCTATGGCTTACTACAGTGCCCCACTACTATAAAC  393

seq1  AGAAGTCATTCTACTCCCATGACCTCACTACTGTAGTGAATATTGATCCT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTCATTCTACTCCCATGACCTCACTACTGTAGTGAATATTGATCCT  443

seq1  TGAGCCAAAATAAAAGCCTTTCTCCTGTAAGTTACCTCTGTTGAGTATTA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCCAAAATAAAAGCCTTTCTCCTGTAAGTTACCTCTGTTGAGTATTA  493

seq1  GATGGCAACAGTGTGAATCACAATATAGACTGTAGCCTTCAAGAGGAAGT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGCAACAGTGTGAATCACAATATAGACTGTAGCCTTCAAGAGGAAGT  543

seq1  CAAAAATCCCAAGCATCATGCTGAGGGCTACCTTGAATAACAGTTTGTCC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAATCCCAAGCATCATGCTGAGGGCTACCTTGAATAACAGTTTGTCC  593

seq1  TTAAGAAAACTTGCTACCTGTAAAATATGCATTAAAAAAAAGAAAGAAAA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGAAAACTTGCTACCTGTAAAATATGCATTAAAAAAAAGAAAGAAAA  643

seq1  GGAAACTTGTCTGAGATTGTGCTATGCTTTAAATTAAAGCATAATAAAAG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAACTTGTCTGAGATTGTGCTATGCTTTAAATTAAAGCATAATAAAAG  693

seq1  ATGATGTCTTAAATTTTCAAATCTGTTTTCAAATGTTTATATATATATAT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGTCTTAAATTTTCAAATCTGTTTTCAAATGTTTATATATATATAT  743

seq1  ATACACCTCACATATACACTTTTTTCTCGGGATTCTGAGAATGATGGGCA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACCTCACATATACACTTTTTTCTCGGGATTCTGAGAATGATGGGCA  793

seq1  GGTTACAAACACAAGTGCAGAGAGTACAGTCCAGCCTTTTATTTTCTAAG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTACAAACACAAGTGCAGAGAGTACAGTCCAGCCTTTTATTTTCTAAG  843

seq1  CCTTATGAAATATCATATTTTTCAATTTTGTAGAAAGTACTTCTTTTCTC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTATGAAATATCATATTTTTCAATTTTGTAGAAAGTACTTCTTTTCTC  893

seq1  ATTTATCTTTATCTGCTACAGAATACTAACCCATGTTTGAATGGTTTCTA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATCTTTATCTGCTACAGAATACTAACCCATGTTTGAATGGTTTCTA  943

seq1  AATATCATTTTCAAAACATGCCAAACATTACTTTAATATCATATTACTAC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCATTTTCAAAACATGCCAAACATTACTTTAATATCATATTACTAC  993

seq1  CTGACTTTACCTTTGCTTTGCCAACTTGGCCATACTTTTCTTCGCATTCA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTTTACCTTTGCTTTGCCAACTTGGCCATACTTTTCTTCGCATTCA  1043

seq1  CATTTCCTAAGAATTGTATTACTCTGTTTTCTTTGAAACCTGAAAGCAAA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCCTAAGAATTGTATTACTCTGTTTTCTTTGAAACCTGAAAGCAAA  1093

seq1  CATTTCCAAAAACAACTAGCTATTATTGGAATTC  1132
      ||||||||||||||||||||||||||||||||||
seq2  CATTTCCAAAAACAACTAGCTATTATTGGAATTC  1127

seq1: chr12_98412732_98413723
seq2: B6Ng01-153L03.g_68_1062

seq1  GAATTCAGCTTCTTTTTTTCCTCCAAGACTGAAATGGTGGGGATAGTTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCTTCTTTTTTTCCTCCAAGACTGAAATGGTGGGGATAGTTGG  50

seq1  TATGATGATACTGTTAAACAACTCCCACCACAGCTAATAAAAAAGATATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATGATACTGTTAAACAACTCCCACCACAGCTAATAAAAAAGATATT  100

seq1  TGAAACTACTAAACACTGATGCAGGGAATTCTATGCAACTAAAATGCATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACTACTAAACACTGATGCAGGGAATTCTATGCAACTAAAATGCATA  150

seq1  AAGTAGGGCTGAAATTCCTCTGTGAAAAGTAAATTAGTTCTTGTACAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAGGGCTGAAATTCCTCTGTGAAAAGTAAATTAGTTCTTGTACAATT  200

seq1  CTGTACATGGATAAAAAGTTTTCTAATATTTCGACCACTCTACTCCTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTACATGGATAAAAAGTTTTCTAATATTTCGACCACTCTACTCCTTTC  250

seq1  TATCTTCCTCACATCCCTGTGAATTCCCTCTTCAATAAAAATCTCCTTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTCCTCACATCCCTGTGAATTCCCTCTTCAATAAAAATCTCCTTTC  300

seq1  CCACATTAATATATTTTGTGCGTGAACTGCTAAGCAACCAGGGCATGGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATTAATATATTTTGTGCGTGAACTGCTAAGCAACCAGGGCATGGTT  350

seq1  TAGACAACCCTGATCTTGACAAGATGAGGTATTAAATGTATGTTAATAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACAACCCTGATCTTGACAAGATGAGGTATTAAATGTATGTTAATAGG  400

seq1  TATAAAACCTGTGTATTTGAAAGTGCTAATAGCACAAGAATTCTCTAAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAACCTGTGTATTTGAAAGTGCTAATAGCACAAGAATTCTCTAAGA  450

seq1  TTCTAAAAGAAAATAGGAATATACTTGCTCCATCAGTTTTGTGAGTTCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAAAAGAAAATAGGAATATACTTGCTCCATCAGTTTTGTGAGTTCTT  500

seq1  TTTTTAAATACTTTTATTACATATTTTCCTCAATTACATTTCCAATGCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAAATACTTTTATTACATATTTTCCTCAATTACATTTCCAATGCTA  550

seq1  TCCCAAAAGTCCCCCATACCCTCCCCACCTCTTCCCTACCCACCCATTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAAAAGTCCCCCATACCCTCCCCACCTCTTCCCTACCCACCCATTCC  600

seq1  CATTTTTTTGGCCCTGGCATTCCCCTGTACTGGGGCATATACAGTTTGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTTTTGGCCCTGGCATTCCCCTGTACTGGGGCATATACAGTTTGCA  650

seq1  TGTCCAATGGGCCTCTCTTTCCAGTGATGGCCGAATAGGCCATCTTTTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCAATGGGCCTCTCTTTCCAGTGATGGCCGAATAGGCCATCTTTTGA  700

seq1  TACATATGCAGCTAGAGTCAAGAGCTCCGGGGTACTGGTTAGTTCATAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATATGCAGCTAGAGTCAAGAGCTCCGGGGTACTGGTTAGTTCATAAT  750

seq1  GTTGTTCCACCTATAGGGTTGAAGATCCCTTTAGCTCCTTGGTACTTTCT  800
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  GTTGTTCCACCTATAGGGTTGAAGATCCCTTTAGCTCTTTGGTACTTTCT  800

seq1  CTAGCTCCTCCGTTGGGAGCCCTGTGATCCATCCACTAGCTGACTGTGAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCTCCTCCGTTGGGAGCCCTGTGATCCATCCACTAGCTGACTGTGAG  850

seq1  CATCTACTTCTGTG-TTTGCTAGGCCCCAGCATAG-TCTCATAAAAGACA  898
      || ||||||||||| |||||||||||||||||||| ||||||||||||||
seq2  CA-CTACTTCTGTGTTTTGCTAGGCCCCAGCATAGTTCTCATAAAAGACA  899

seq1  GCTATATCTGGGTTCTTT-CAGCAAATTC-TTGCTAGTGTATGCAATGGT  946
      |||||||||||||||||| || ||||||| |||| | |||  ||| ||||
seq2  GCTATATCTGGGTTCTTTCCACCAAATTCTTTGCAATTGTTGGCATTGGT  949

seq1  A-TCAGCGTTTGGAAGCTGATTATGGGGTGGATCCCTGGATATGGCA  992
      | |||||||||||||||||||||||||| | |||||||||| |||||
seq2  ATTCAGCGTTTGGAAGCTGATTATGGGGGGAATCCCTGGAT-TGGCA  995