BAC Information

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BAC

Clone NameB6Ng01-153O21
Chromosome12 (Build37)
Map Location 67,474,869 - 67,475,993
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040700, EG238217
Downstream geneMdga2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-153O21.bB6Ng01-153O21.g
ACCDH949108DH949109
length1,1821,133
definitionDH949108|Mus musculus domesticus DNA, BAC clone: B6Ng01-153O21, 5' end.DH949109|Mus musculus domesticus DNA, BAC clone: B6Ng01-153O21, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ctttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttctttga
tccatttagatttgaccttagtacaaggagataagtatggatcagttcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gactataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttaccacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctatgttttttgttattccagatg
aatttgcaaattgctccttctaattcgtttaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagagacttgaagttttatcatac
agatctttcacttccttagttagagtcactccgagatattttaaattatt
tgtgactattgagaaggtgttgtttccctaatttctttcctcagcctgtt
tatttctttgggtagagaagggcatgacttgttgagtcattttattcagg
ctaccttccgagactgttattcaggttagggagtgtctctggtggaaatt
ttcagggtactatatgactctcattaccatctcgcaaaggaatgagccct
ccctccaattggatctccgtgatcctttggtc
gaattcttttaccctagaatcagcctggattatttagaaatctcattgtt
tgagttcttaattttctcaataaccttacagaaatgattatgcttaagcc
atcccaaggagatagatttatttatttatttatttatttatttatttatt
tatttatttactatctgtctcataaggaaattaacagtagacacatagca
gacttatctcagtagtccttcagacattctcagacaagcgtgaacacagc
aaagagcctatgccttcaacttaggcaaaggaactgacattggaatgtat
gggggcacatctactctgcttctttctagcttgtggttttcattcagttt
aggttatatctcctacatttaaaggtgtctgaataccacctatcctgcca
taaggactcgtttacagtttcttagtcatataattggagtgcttagaaaa
tagagtcctttaggtcaaacatgcctcagaggcttaaggttctctcaacc
ttctcaaacatctgtcctctggtttcatttcaagacactttccttcatcc
tgaagctgtccattctttttgatcattgaccttcaggaactaatttctta
cttttagtcaaaatacaatcccataaaatttctatgtatttgactcagag
accaactagcaaatatactcagcaagtttatatatactccctaatgacat
tgtctcaaatgtttaaaaatatttactgtagtcactattcattactcact
cattttgtagatttattgaagtacaattgacaaatacatgctgtcctatt
tctccaaaaatgtcagagctcccaaaagtctcatgtctgggcatgggttt
agaggcaacagtgaatcgtctggaagaaagaaatcttacttttagtcatt
acatgactctgaagatttttaggtgccatcctaagcaagaacctattttt
aaaactaaataaccctagtaacctggagattcaagtaaccccacacaggt
ttatgggagcatcagtttgatctgttcacagaaccgtgtacggagggtgt
tccagacaacctgggaaaggcaggagccggacatcatcaagccgaagagc
ctctgctagcgaaggctgggtcagtacgcagca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_67474869_67475993
seq2: B6Ng01-153O21.g_69_1201 (reverse)

seq1  TGCTG---ACTGACCCAGCCTGCTGCTAGCAGATGCT-GTCAGCTTGTTG  46
      |||||   ||||||||||||| | ||||||||| |||  || ||||| ||
seq2  TGCTGCGTACTGACCCAGCCTTC-GCTAGCAGAGGCTCTTCGGCTTGATG  49

seq1  ATGTCCAGCCCTCCTGCCTCTCCCAGCTGCTCTGTAGCACCTTCTGT-CA  95
      |||||| |  ||||||||| |||||| |  |||| | |||| || || ||
seq2  ATGTCCGG--CTCCTGCCTTTCCCAGGTTGTCTGGAACACCCTCCGTACA  97

seq1  CGG-TCTGTG-ACAGATCAAACTGATGCT-CCAT-AACCTGTGT-GTGTT  140
      ||| |||||| |||||||||||||||||| |||| ||||||||| | |||
seq2  CGGTTCTGTGAACAGATCAAACTGATGCTCCCATAAACCTGTGTGGGGTT  147

seq1  ACTTG-ATCT-CAGGTTACTAGGGTTATTTAGTTTTTAAAAATAGGTTCT  188
      ||||| |||| ||||||||||||||||||||| |||||||||||||||||
seq2  ACTTGAATCTCCAGGTTACTAGGGTTATTTAG-TTTTAAAAATAGGTTCT  196

seq1  TGCTTAGGATGGCACCTAAAAATTCTTCAGAGTCATGTAATGACTAAAAG  238
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TGCTTAGGATGGCACCTAAAAA-TCTTCAGAGTCATGTAATGACTAAAAG  245

seq1  TAAGATTTCTTTCTTCCAGACGATTCACTGTTGCCTCTAAACCCATGCCC  288
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATTTCTTTCTTCCAGACGATTCACTGTTGCCTCTAAACCCATGCCC  295

seq1  AGACATGAGACTTTTGGGAGCTCTGACATTTTTGGAG-AATAGGACAGCA  337
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  AGACATGAGACTTTTGGGAGCTCTGACATTTTTGGAGAAATAGGACAGCA  345

seq1  TGTATTTGTCAATTGTACTTCAATAAATCTACAAAATGAGTGAGTAATGA  387
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTTGTCAATTGTACTTCAATAAATCTACAAAATGAGTGAGTAATGA  395

seq1  ATAGTGACTACAGTAAATATTTTTAAACATTTGAGACAATGTCATTAGGG  437
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTGACTACAGTAAATATTTTTAAACATTTGAGACAATGTCATTAGGG  445

seq1  AGTATATATAAACTTGCTGAGTATATTTGCTAGTTGGTCTCTGAGTCAAA  487
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATATATAAACTTGCTGAGTATATTTGCTAGTTGGTCTCTGAGTCAAA  495

seq1  TACATAGAAATTTTATGGGATTGTATTTTGACTAAAAGTAAGAAATTAGT  537
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATAGAAATTTTATGGGATTGTATTTTGACTAAAAGTAAGAAATTAGT  545

seq1  TCCTGAAGGTCAATGATCAAAAAGAATGGACAGCTTCAGGATGAAGGAAA  587
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGAAGGTCAATGATCAAAAAGAATGGACAGCTTCAGGATGAAGGAAA  595

seq1  GTGTCTTGAAATGAAACCAGAGGACAGATGTTTGAGAAGGTTGAGAGAAC  637
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTTGAAATGAAACCAGAGGACAGATGTTTGAGAAGGTTGAGAGAAC  645

seq1  CTTAAGCCTCTGAGGCATGTTTGACCTAAAGGACTCTATTTTCTAAGCAC  687
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAGCCTCTGAGGCATGTTTGACCTAAAGGACTCTATTTTCTAAGCAC  695

seq1  TCCAATTATATGACTAAGAAACTGTAAACGAGTCCTTATGGCAGGATAGG  737
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAATTATATGACTAAGAAACTGTAAACGAGTCCTTATGGCAGGATAGG  745

seq1  TGGTATTCAGACACCTTTAAATGTAGGAGATATAACCTAAACTGAATGAA  787
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTATTCAGACACCTTTAAATGTAGGAGATATAACCTAAACTGAATGAA  795

seq1  AACCACAAGCTAGAAAGAAGCAGAGTAGATGTGCCCCCATACATTCCAAT  837
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCACAAGCTAGAAAGAAGCAGAGTAGATGTGCCCCCATACATTCCAAT  845

seq1  GTCAGTTCCTTTGCCTAAGTTGAAGGCATAGGCTCTTTGCTGTGTTCACG  887
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGTTCCTTTGCCTAAGTTGAAGGCATAGGCTCTTTGCTGTGTTCACG  895

seq1  CTTGTCTGAGAATGTCTGAAGGACTACTGAGATAAGTCTGCTATGTGTCT  937
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTCTGAGAATGTCTGAAGGACTACTGAGATAAGTCTGCTATGTGTCT  945

seq1  ACTGTTAATTTCCTTATGAGACAGATAGTAAATAAATAAATAAATAAATA  987
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTAATTTCCTTATGAGACAGATAGTAAATAAATAAATAAATAAATA  995

seq1  AATAAATAAATAAATAAATAAATCTATCTCCTTGGGATGGCTTAAGCATA  1037
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATAAATAAATAAATAAATCTATCTCCTTGGGATGGCTTAAGCATA  1045

seq1  ATCATTTCTGTAAGGTTATTGAGAAAATTAAGAACTCAAACAATGAGATT  1087
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTTCTGTAAGGTTATTGAGAAAATTAAGAACTCAAACAATGAGATT  1095

seq1  TCTAAATAATCCAGGCTGATTCTAGGGTAAAAGAATTC  1125
      ||||||||||||||||||||||||||||||||||||||
seq2  TCTAAATAATCCAGGCTGATTCTAGGGTAAAAGAATTC  1133