BAC Information

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BAC

Clone NameB6Ng01-154K06
Chromosome12 (Build37)
Map Location 65,660,497 - 65,661,654
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC435302, EG623046
Downstream geneLOC623123, LOC217645, LOC217647, Gm527, Klhl28, A430041B07Rik, Prpf39, Fkbp3, Fancm, C79407, Wdr20b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-154K06.bB6Ng01-154K06.g
ACCDH949633DH949634
length1,1411,188
definitionDH949633|Mus musculus domesticus DNA, BAC clone: B6Ng01-154K06, 5' end.DH949634|Mus musculus domesticus DNA, BAC clone: B6Ng01-154K06, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctataaagtcactaattcatctaaacagcattaatttgaaagttc
atctttatgttcatctgcaaaaaatctggtcaataaggtagactaatgtc
cagggattcttacattaataataacaggaaaggcatatcagctccaagaa
gcaatcctgaaatgaagtctctttgggactttgcttcacagagctcaccc
atcacagaccaagcacaagcagtgggccacctccagaaaggcaaactact
agatgtagcctttcctagatagctcctgacataacctcaacaaacttttg
gttcagcaagtcactcatagttagaaacatttcttttgtttcttcactgc
cttgtccatcattaatagttcatgtcttcccaagaaatgtcacatgagga
ttatggacacagagaagactagtggggaagactgaggaacactttttgat
tggcaagtttccatgggctagacttatactcacaacagcacatagcttcc
ttcatgaagaaaagctaactttaacattaggaatgtcaaatttttataaa
attaattgatggggacaaaaataatttgagagttatgaagattgattata
tattgtattccctgtctgttgtggtgttaaaggttcagttagtacagaac
ctcgacttaaaactttaaaaattcacaaaattaggagagaaacacattag
atacccttctagtgtccttaccaaaaatgcaaattaaaaattttaaagtt
acttctacttaggaaaagaaattttttacagaagaaaaacactgtaagga
aaaaaaaactgttttacattaaactggcccaatttacctttattgctcac
agtgagagctgagtcaggagaaagaaactgaagacggcaggacccagtgg
cctcactggcaaagatatattggcactgctgcacaacagtgctccgggag
gcagtgggatgttaacactgacaccaggcagaaggggtcactagagtgac
ctggatagcggcagatacaatgttcctgtgaccactctgagaaattgttc
caatggagtacaaataaaatttctgagaagcatgggttcttgtagctttg
ctgggctattaactttacaaaattagatctgactatcagtt
gaattcatgtccagattagtgttacttttgttaaatggggtgaactcaag
catgttatatagcaagtccacaaggttctttaaagagtcatatattcaga
aacaccagcagcttagactctggctacaggcaatgtggaaggaggatggt
ttgggtcctggcagaagtgagattatgataaatgcttggcttcagccata
agctccttttcacagaaaggaaggaatgttcaggctcagagagtgacaac
aactgatgtggagttgagccagggaaatttattctaaggctttgaagtcc
cttcaacaatgttccaatgtttgccagctggggtatgtgggtctacctcc
tgcccatgtcccatttcctctaaaaggttaatgtgttttgttttttgttt
tttgtttttttttgacaaaacttccttgggaagatgcagcacacatggct
accccccccccccccactcacctgatagggatctcatgacagaccaaagt
aactgatagcacccaagtccaagttggtgaaccaatgagtttgattgggg
ttacttaccgaaatatggatgaggggatatttgcaggaacagaagtgact
cacagacagctgtatcactaaagctcaccccagcgtgggtcacagatcat
aaaagctgtgaggctgactcacactgaaagccctgcaggcagctcgagag
attggcaagtgccctttccaggtgtctctgtctaaaccactggagctggg
ttctggttcttccagcagctgatctgctctcaagaatctttgcaggaggg
tttatctgaatcttctttgcagctcagctttcttcactctgagggaggtt
ctctgcttttattgtttcattttattctctgggagggagggacttaatga
ttctgttcagtttcatgggctcctgagcaaattaggagcttcttgcagga
cagatgtgtcatttcaggggaagctttacacagtaggtttgtgcttgata
atactatttatggatgtggtgatgtaggaggggggccagtattttccctc
atattaggcatttatgctatgatcagagaattacttccggacgaaagatg
actcttgtaagcctctgatctgactattcaccaggctcggataggatctg
gataaatgagcttggaatgagacatctggtggggcact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_65660497_65661654
seq2: B6Ng01-154K06.b_41_1181

seq1  GAATTCTATAAAGTCACTAATTCATCTAAACAGCATTAATTTGAAAGTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATAAAGTCACTAATTCATCTAAACAGCATTAATTTGAAAGTTC  50

seq1  ATCTTTATGTTCATCTGCAAAAAATCTGGTCAATAAGGTAGACTAATGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTATGTTCATCTGCAAAAAATCTGGTCAATAAGGTAGACTAATGTC  100

seq1  CAGGGATTCTTACATTAATAATAACAGGAAAGGCATATCAGCTCCAAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGATTCTTACATTAATAATAACAGGAAAGGCATATCAGCTCCAAGAA  150

seq1  GCAATCCTGAAATGAAGTCTCTTTGGGACTTTGCTTCACAGAGCTCACCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATCCTGAAATGAAGTCTCTTTGGGACTTTGCTTCACAGAGCTCACCC  200

seq1  ATCACAGACCAAGCACAAGCAGTGGGCCACCTCCAGAAAGGCAAACTACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACAGACCAAGCACAAGCAGTGGGCCACCTCCAGAAAGGCAAACTACT  250

seq1  AGATGTAGCCTTTCCTAGATAGCTCCTGACATAACCTCAACAAACTTTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTAGCCTTTCCTAGATAGCTCCTGACATAACCTCAACAAACTTTTG  300

seq1  GTTCAGCAAGTCACTCATAGTTAGAAACATTTCTTTTGTTTCTTCACTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAGCAAGTCACTCATAGTTAGAAACATTTCTTTTGTTTCTTCACTGC  350

seq1  CTTGTCCATCATTAATAGTTCATGTCTTCCCAAGAAATGTCACATGAGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTCCATCATTAATAGTTCATGTCTTCCCAAGAAATGTCACATGAGGA  400

seq1  TTATGGACACAGAGAAGACTAGTGGGGAAGACTGAGGAACACTTTTTGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGGACACAGAGAAGACTAGTGGGGAAGACTGAGGAACACTTTTTGAT  450

seq1  TGGCAAGTTTCCATGGGCTAGACTTATACTCACAACAGCACATAGCTTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAAGTTTCCATGGGCTAGACTTATACTCACAACAGCACATAGCTTCC  500

seq1  TTCATGAAGAAAAGCTAACTTTAACATTAGGAATGTCAAATTTTTATAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGAAGAAAAGCTAACTTTAACATTAGGAATGTCAAATTTTTATAAA  550

seq1  ATTAATTGATGGGGACAAAAATAATTTGAGAGTTATGAAGATTGATTATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATTGATGGGGACAAAAATAATTTGAGAGTTATGAAGATTGATTATA  600

seq1  TATTGTATTCCCTGTCTGTTGTGGTGTTAAAGGTTCAGTTAGTACAGAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTATTCCCTGTCTGTTGTGGTGTTAAAGGTTCAGTTAGTACAGAAC  650

seq1  CTCGACTTAAAACTTTAAAAATTCACAAAATTAGGAGAGAAACACATTAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGACTTAAAACTTTAAAAATTCACAAAATTAGGAGAGAAACACATTAG  700

seq1  ATACCCTTCTAGTGTCCTTACCAAAAATGCAAATTAAAAATTTTAAAGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCCTTCTAGTGTCCTTACCAAAAATGCAAATTAAAAATTTTAAAGTT  750

seq1  ACTTCTACTTAGGAAAAGAAATTTTTTACAGAAGAAAAACACTGTAAGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTACTTAGGAAAAGAAATTTTTTACAGAAGAAAAACACTGTAAGGA  800

seq1  AAAAAAAACTGTTTTACATTAAACTGGCCCAATTTACCTTTATTGCTCAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAACTGTTTTACATTAAACTGGCCCAATTTACCTTTATTGCTCAC  850

seq1  AGTGAGAGCTGAGTCAGGAGAAAGAAACTGAAGACGGCAGGACCCAGTGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAGAGCTGAGTCAGGAGAAAGAAACTGAAGACGGCAGGACCCAGTGG  900

seq1  CCTCACTGGCAAAGATATATTGGCACTGCTGCACAACAGTGCTCCGGGAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCACTGGCAAAGATATATTGGCACTGCTGCACAACAGTGCTCCGGGAG  950

seq1  GCAGGTGGGATGTTAACACTGACACCAGGGCAGAAAGGGGGTCACTAAGA  1000
      ||| ||||||||||||||||||||||| |||||||  ||||||||| |||
seq2  GCA-GTGGGATGTTAACACTGACACCA-GGCAGAA--GGGGTCACT-AGA  995

seq1  GTTGACCTGGATAAGCCGGCAGGAATTACACTGTTCCTGTGACCACTCTT  1050
      | |||||||||||   ||||||    |||| ||||||||||||||||| |
seq2  G-TGACCTGGATA--GCGGCAG---ATACAATGTTCCTGTGACCACTC-T  1038

seq1  GAGAAATTGTTTCACAATGGAGTACAAAT-ACATTTCTGAG-AGCATGGG  1098
      |||||||||||   ||||||||||||||| | ||||||||| ||||||||
seq2  GAGAAATTGTT--CCAATGGAGTACAAATAAAATTTCTGAGAAGCATGGG  1086

seq1  TTTCTTTGTCAGCTTTGCTGGGCTA-TAACTTTACAAAAATAAGATTCCT  1147
      ||   |||| ||||||||||||||| ||||||||| ||||| ||||  ||
seq2  TT--CTTGT-AGCTTTGCTGGGCTATTAACTTTAC-AAAATTAGAT--CT  1130

seq1  GACTATCAGTT  1158
      |||||||||||
seq2  GACTATCAGTT  1141