BAC Information

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BAC

Clone NameB6Ng01-154K15
Chromosome12 (Build37)
Map Location 111,831,141 - 111,943,096
singlet/doubletdoublet
Overlap gene9430024F10Rik, Dync1h1, 1700001K19Rik, Hsp90aa1
Upstream geneRtl1, B830012L14Rik, LOC100040715, LOC100040724, LOC675987, LOC100041509, LOC100040746, 3110009F21Rik, Dio3as, Dio3, EG629595, EG668245, LOC100040799, Ppp2r5c
Downstream geneWdr20a, Rage, 2810455K09Rik, LOC100041649, 2810452K22Rik, 4930573I19Rik, Ankrd9, 6030440G07Rik, Rcor1, 4930595D18Rik, Traf3, Amn, Cdc42bpb, A230065H16Rik, 1200009I06Rik, Tnfaip2, Gm266, Eif5, Mark3, Ckb, 6720458F09Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-154K15.bB6Ng01-154K15.g
ACCDH949649DH949650
length5621,078
definitionDH949649|Mus musculus domesticus DNA, BAC clone: B6Ng01-154K15, 5' end.DH949650|Mus musculus domesticus DNA, BAC clone: B6Ng01-154K15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(111,831,141 - 111,831,708)(111,942,013 - 111,943,096)
sequence
attctagaccaggctagcctcaaatccacagagacctacctgcctctgcc
tcccaagtgttggggttaagggactataccaccaccatctggcacaaata
cagtatttagggattaaggagtccaagtggatagctgttgggggcatgga
gctcagaacctgagagatcagggatctaggccgcaggtgtagtgttcagg
tgtaagacaggtatagcttcaagtagataggtggattgtcagccgttcac
gcacgtaggaggtgacgggccgggctgaagccctaggtaaagttcagagg
tctctgcttcagcgggtggtcatcacgatgtcaggcaccctccttacagg
gtccatgttcgggtgttgtgcctcgtggcggccctccattggtcagtgca
tttgaccagtttgaaacccggtttttctgctgtttttattcagcccatat
gctcatgttttcgtgtgctttgataagcctggagaatgctggcattttac
ctttaggaataaagttggtattagtgtgtgtctatggtgatgtaggtgga
ggtttatggtat
gaattccttcccttccacaggctgcactgcctgacctagtgagctgagtt
ccttctgagaaaacccatcctgtttcagtggcttggttcaaagaccacac
ttgttcctcatcgtgaaatggagtccgggatatgtcgcagaagcagatag
ctttgctatcggaggggacccggaggaaacaaggtatggcagttgggatg
ccagcccaggtcttcaggatacagtgcagatgtctggtacttctgtcact
aatgtgttgagcttgctggtgtctacacacgaattcacagctactgcgca
cagaattgcccaggtgggcaggcaaaacgaggtcattgtcaagaccctgt
gattctcaggaaaagaagagacctgttttgttttgttttgttttgttttg
ttttgttttgttttaaactacaacttaaatctcccaaattactctactcg
ggcttttggggcaggaaaattaaagtttcatgacctgtcttggttatgga
aagttccagacaagttgggcatctaagcaaaagcctgcctcaacagtaaa
aagaatggggcccaggaatgcagctcagtggcggagggaggacttgactg
gcatcctcaggtccatccgacccaacacctcacaaacaagtactggaaat
aaaaagaagacgaaagactgggatgccacatcttttaaattcacattcca
ttttggagaccctgaccctaagtttgaattcacgtaaactaacaggccag
tacctagcattagtttccaagctacccctcaacaagacccgagcctagct
ccggtctctaggctaatcgccaacaagaccagcgtttccaggttacaccc
tcataagaccagtgtctccaggttattcctcaacaaacctgcacccctgg
gttacaagcccaccccctgcctaacgaccaccaatgcagaggacagcaga
agttaagttatgatcgactcccagcaccagccagtatgttaaagaccaca
ggagctgccaatcagatgcatgccacacgtactccatcctgctcctgctc
gctgcttcctagaagagccctgctccta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_111831141_111831708
seq2: B6Ng01-154K15.b_47_614

seq1  GAATTCATTCTAGACCAGGCTAGCCTCAAATCCACAGAGACCTACCTGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTCTAGACCAGGCTAGCCTCAAATCCACAGAGACCTACCTGCC  50

seq1  TCTGCCTCCCAAGTGTTGGGGTTAAGGGACTATACCACCACCATCTGGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCTCCCAAGTGTTGGGGTTAAGGGACTATACCACCACCATCTGGCA  100

seq1  CAAATACAGTATTTAGGGATTAAGGAGTCCAAGTGGATAGCTGTTGGGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATACAGTATTTAGGGATTAAGGAGTCCAAGTGGATAGCTGTTGGGGG  150

seq1  CATGGAGCTCAGAACCTGAGAGATCAGGGATCTAGGCCGCAGGTGTAGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGAGCTCAGAACCTGAGAGATCAGGGATCTAGGCCGCAGGTGTAGTG  200

seq1  TTCAGGTGTAAGACAGGTATAGCTTCAAGTAGATAGGTGGATTGTCAGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGGTGTAAGACAGGTATAGCTTCAAGTAGATAGGTGGATTGTCAGCC  250

seq1  GTTCACGCACGTAGGAGGTGACGGGCCGGGCTGAAGCCCTAGGTAAAGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCACGCACGTAGGAGGTGACGGGCCGGGCTGAAGCCCTAGGTAAAGTT  300

seq1  CAGAGGTCTCTGCTTCAGCGGGTGGTCATCACGATGTCAGGCACCCTCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGTCTCTGCTTCAGCGGGTGGTCATCACGATGTCAGGCACCCTCCT  350

seq1  TACAGGGTCCATGTTCGGGTGTTGTGCCTCGTGGCGGCCCTCCATTGGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGGGTCCATGTTCGGGTGTTGTGCCTCGTGGCGGCCCTCCATTGGTC  400

seq1  AGTGCATTTGACCAGTTTGAAACCCGGTTTTTCTGCTGTTTTTATTCAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCATTTGACCAGTTTGAAACCCGGTTTTTCTGCTGTTTTTATTCAGC  450

seq1  CCATATGCTCATGTTTTCGTGTGCTTTGATAAGCCTGGAGAATGCTGGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATATGCTCATGTTTTCGTGTGCTTTGATAAGCCTGGAGAATGCTGGCA  500

seq1  TTTTACCTTTAGGAATAAAGTTGGTATTAGTGTGTGTCTATGGTGATGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACCTTTAGGAATAAAGTTGGTATTAGTGTGTGTCTATGGTGATGTA  550

seq1  GGTGGAGGTTTATGGTAT  568
      ||||||||||||||||||
seq2  GGTGGAGGTTTATGGTAT  568

seq1: chr12_111942013_111943096
seq2: B6Ng01-154K15.g_70_1147 (reverse)

seq1  TAGGAGGCAGGGCTC-TCTAGGAAGCAGCGAGCAGGGAGCAGGGATGGAG  49
      ||||| ||||||||| |||||||||||||||||| |||||| ||||||||
seq2  TAGGA-GCAGGGCTCTTCTAGGAAGCAGCGAGCA-GGAGCA-GGATGGAG  47

seq1  TACGTGT-GCATGCATCTGATTGGCAAGCTCCTGTGGTCTTTAACATAAC  98
      ||||||| ||||||||||||||||| ||||||||||||||||||||| ||
seq2  TACGTGTGGCATGCATCTGATTGGC-AGCTCCTGTGGTCTTTAACAT-AC  95

seq1  TGGCTGGTGCTGGGAGTCGGATCATAACTTAACTTCTGCTGTCCTCTGCA  148
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TGGCTGGTGCTGGGAGTC-GATCATAACTTAACTTCTGCTGTCCTCTGCA  144

seq1  TTGGTGGTCGTTAGGCAGGGGGTGGGCTTGTAACCCAGGGGTGCAGGTTT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTGGTCGTTAGGCAGGGGGTGGGCTTGTAACCCAGGGGTGCAGGTTT  194

seq1  GTTGAGGAAATAACCTGGAGACACTGGTCTTATTGAGGGTGTAACCTGGA  248
      ||||||| |||||||||||||||||||||||| |||||||||||||||||
seq2  GTTGAGG-AATAACCTGGAGACACTGGTCTTA-TGAGGGTGTAACCTGGA  242

seq1  AACGCTGGTCTTGTTGGCGATTAGCCTAGAGACCGGAGCTAGGCTCGGGT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGCTGGTCTTGTTGGCGATTAGCCTAGAGACCGGAGCTAGGCTCGGGT  292

seq1  CTTGTTGAGGGGTAGCTTGGAAACTAATGCTAGGTACTGGCCTGTTAGTT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTGAGGGGTAGCTTGGAAACTAATGCTAGGTACTGGCCTGTTAGTT  342

seq1  TACCTGAATTCAAACTTAGGGTCAGGGTCTCCAAAATGGAATGTGAATTT  398
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGTGAATTCAAACTTAGGGTCAGGGTCTCCAAAATGGAATGTGAATTT  392

seq1  AAAAGATGTGGCATCCCAGTCTTTCGTCTTCTTTTTATTTCCAGTACTTG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGATGTGGCATCCCAGTCTTTCGTCTTCTTTTTATTTCCAGTACTTG  442

seq1  TTTGTGAGGTGTTGGGTCGGATGGACCTGAGGATGCCAGTCAAGTCCTCC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGAGGTGTTGGGTCGGATGGACCTGAGGATGCCAGTCAAGTCCTCC  492

seq1  CTCCGCCACTGAGCTGCATTCCTGGGCCCCATTCTTTTTACTGTTGAGGC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCGCCACTGAGCTGCATTCCTGGGCCCCATTCTTTTTACTGTTGAGGC  542

seq1  AGGCTTTTGCTTAGATGCCCAACTTGTCTGGAACTTTCCATAACCAAGAC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTTTGCTTAGATGCCCAACTTGTCTGGAACTTTCCATAACCAAGAC  592

seq1  AGGTCATGAAACTTTAATTTTCCTGCCCCAAAAGCCCGAGTAGAGTAATT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCATGAAACTTTAATTTTCCTGCCCCAAAAGCCCGAGTAGAGTAATT  642

seq1  TGGGAGATTTAAGTTGTAGTTTAAAACAAAACAAAACAAAACAAAACAAA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGATTTAAGTTGTAGTTTAAAACAAAACAAAACAAAACAAAACAAA  692

seq1  ACAAAACAAAACAGGTCTCTTCTTTTCCTGAGAATCACAGGGTCTTGACA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAACAAAACAGGTCTCTTCTTTTCCTGAGAATCACAGGGTCTTGACA  742

seq1  ATGACCTCGTTTTGCCTGCCCACCTGGGCAATTCTGTGCGCAGTAGCTGT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACCTCGTTTTGCCTGCCCACCTGGGCAATTCTGTGCGCAGTAGCTGT  792

seq1  GAATTCGTGTGTAGACACCAGCAAGCTCAACACATTAGTGACAGAAGTAC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCGTGTGTAGACACCAGCAAGCTCAACACATTAGTGACAGAAGTAC  842

seq1  CAGACATCTGCACTGTATCCTGAAGACCTGGGCTGGCATCCCAACTGCCA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACATCTGCACTGTATCCTGAAGACCTGGGCTGGCATCCCAACTGCCA  892

seq1  TACCTTGTTTCCTCCGGGTCCCCTCCGATAGCAAAGCTATCTGCTTCTGC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTTGTTTCCTCCGGGTCCCCTCCGATAGCAAAGCTATCTGCTTCTGC  942

seq1  GACATATCCCGGACTCCATTTCACGATGAGGAACAAGTGTGGTCTTTGAA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATATCCCGGACTCCATTTCACGATGAGGAACAAGTGTGGTCTTTGAA  992

seq1  CCAAGCCACTGAAACAGGATGGGTTTTCTCAGAAGGAACTCAGCTCACTA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGCCACTGAAACAGGATGGGTTTTCTCAGAAGGAACTCAGCTCACTA  1042

seq1  GGTCAGGCAGTGCAGCCTGTGGAAGGGAAGGAATTC  1084
      ||||||||||||||||||||||||||||||||||||
seq2  GGTCAGGCAGTGCAGCCTGTGGAAGGGAAGGAATTC  1078