BAC Information

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BAC

Clone NameB6Ng01-155C22
Chromosome12 (Build37)
Map Location 44,296,051 - 44,434,172
singlet/doubletdoublet
Overlap genenone
Upstream genenone
Downstream geneLOC100039059, ENSMUSG00000066507, LOC100039081, LOC664854, Dnajb9, LOC100039062, Pnpla8, Nrcam
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-155C22.bB6Ng01-155C22.g
ACCDH950034DH950035
length1,192822
definitionDH950034|Mus musculus domesticus DNA, BAC clone: B6Ng01-155C22, 5' end.DH950035|Mus musculus domesticus DNA, BAC clone: B6Ng01-155C22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(44,296,051 - 44,296,827)(44,433,351 - 44,434,172)
sequence
gaattctcacctgaggaatactgaatggctgagaagcacctgaaaaaatg
ttcaacatccttaaacatcagggaaatgcaaatcaaaacagctctgagaa
tccacctcacaccagtcagaatggctaagatcaaaaactcaggtgacagc
acatgctggcggggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggatatcagtctggcagttcctca
gaaaactggatatagtactactggtagatccagcaatacctctcctgggc
atatacccagaagatgttccaattggtaataaggacacatgctccactat
gttcatagcagccctatttataatagccagaagctggaaagaacccaaat
gtccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gagtactattcagctattaaaaagaatgaatttgtgaaattcctaggcaa
atggatggacctggagggcatcatcctgagtgaggtaacccaatcacaaa
agaactcacatgatatgtactcactgataagtggatattagcccagaaac
ttatcatacctaagatacaagatacaatctgcaaaacacatgaaactcaa
gaagaacaaagaccaaaatgtggacacttggcccgttcttaaaattggga
acaaaacacccatggaaggagttgcagagacaaagtttggagctgagacg
aaaggatggaccatctagagtctgccatacccggggatccatcccataat
cagcctccagacactgataccattgcatacactatcaagattttgctgaa
aggatccagatatagctgtctcttctgaggctatactggggcctagcaaa
cacagaagtggaaactcacagtttcctgagtttacctgtgttcagaattc
aaatatacagatttcagcaaataatcataaaataaaggaatagaaaaata
atcgtgaacaaaataaaaatcatagaattctaaacttagtattggaacaa
atatacaggatcagtaatattcaatacagtttttttctgctacattatgt
aatgaaaataattactcaaaaagatgttctacacctctctgatagtagca
tccagttgtatgaataaaatcaagacatgtgaggagaatgag
gaattcactatttctactaagtttttcctgaacacactgtcaaaacgaaa
ccgtattcttctgtgtttgatttctcactgcaattcacactattaactta
ttgataaaatctctagaaattgactcatttatcccccactgctttttttg
ttccttctccactttttcccttcaccatttaacttcttcagttatattat
ttttatgttaataataactatgtttataaattttcaaaacatatcatctt
gaaacatttaaaaataatcaatatagatatatacttaaaatatttgtata
ggaaaatctaaacttcccaattttctaagactttattgccagaaatatat
tgctcttaaattatttgaatgttatgtctcaccaacccttttaaaattta
cctcatataaatctcataaactactttttatttatttatgcttaatctat
aagaactacaacaacatttataatgatatttgtaatgtcaatgatttgtt
atgaacataatattatttattgcttaaattgaacatggctatgtaaaaag
ttcaaatatcaattatttctgaacaacaatcacacatcaatattagttgt
gacttagtagaacttacaactaattttggaattttatattattggaaaaa
ttatataaatagaattcataaatattggtttatatttgaatctaatagaa
acatgattattattgatctcttttctatactgtatctaatttagatttta
tatgcaatgaatgaaattgattttaaattttatatttacctgtatgtatg
tatgtatgtatgtatgtatgta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_44296051_44296827
seq2: B6Ng01-155C22.b_471_1237

seq1  GAAAATGTGGTACATTTACACAATGGAGTACTATTCAGCTATTAAAAAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATGTGGTACATTTACACAATGGAGTACTATTCAGCTATTAAAAAGA  50

seq1  ATGAATTTGTGAAATTCCTAGGCAAATGGATGGACCTGGAGGGCATCATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATTTGTGAAATTCCTAGGCAAATGGATGGACCTGGAGGGCATCATC  100

seq1  CTGAGTGAGGTAACCCAATCACAAAAGAACTCACATGATATGTACTCACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTGAGGTAACCCAATCACAAAAGAACTCACATGATATGTACTCACT  150

seq1  GATAAGTGGATATTAGCCCAGAAACTTATCATACCTAAGATACAAGATAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAGTGGATATTAGCCCAGAAACTTATCATACCTAAGATACAAGATAC  200

seq1  AATCTGCAAAACACATGAAACTCAAGAAGAACAAAGACCAAAATGTGGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTGCAAAACACATGAAACTCAAGAAGAACAAAGACCAAAATGTGGAC  250

seq1  ACTTGGCCCGTTCTTAAAATTGGGAACAAAACACCCATGGAAGGAGTTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGGCCCGTTCTTAAAATTGGGAACAAAACACCCATGGAAGGAGTTGC  300

seq1  AGAGACAAAGTTTGGAGCTGAGACGAAAGGATGGACCATCTAGAGTCTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACAAAGTTTGGAGCTGAGACGAAAGGATGGACCATCTAGAGTCTGC  350

seq1  CATACCCGGGGATCCATCCCATAATCAGCCTCCAGACACTGATACCATTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACCCGGGGATCCATCCCATAATCAGCCTCCAGACACTGATACCATTG  400

seq1  CATACACTATCAAGATTTTGCTGAAAGGATCCAGATATAGCTGTCTCTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACACTATCAAGATTTTGCTGAAAGGATCCAGATATAGCTGTCTCTTC  450

seq1  TGAGGCTATACTGGGGCCTAGCAAACACAGAAGTGGAAACTCACAGTTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCTATACTGGGGCCTAGCAAACACAGAAGTGGAAACTCACAGTTTC  500

seq1  CTGAGTTTACCTGTGTTCAGAATTCAAATATACAGATTTCAGCAAATAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTTTACCTGTGTTCAGAATTCAAATATACAGATTTCAGCAAATAAT  550

seq1  CATAAAATAAAGGAATAGAAAAATTAATCGTGAACAAAAATAAAAATCAT  600
      ||||||||||||||||||||||| ||||||||||| ||||||||||||||
seq2  CATAAAATAAAGGAATAGAAAAA-TAATCGTGAAC-AAAATAAAAATCAT  598

seq1  AGAA-TCTAAACTTAGTATTGGAACAAATATACAAGGGATCAGTAATTAT  649
      |||| |||||||||||||||||||||||||||||  |||||||||| |||
seq2  AGAATTCTAAACTTAGTATTGGAACAAATATACA--GGATCAGTAA-TAT  645

seq1  TCAATACAGGTTTTTTTCTGCCTACATTATGTTAATGAAAATAATTACTC  699
      |||||||| ||||||||||| |||||||||| ||||||||||||||||||
seq2  TCAATACA-GTTTTTTTCTG-CTACATTATG-TAATGAAAATAATTACTC  692

seq1  AAAAAAGATGGTTCTACA-CTCCCTGATAGTAGCATTCAGTTGTTATTGA  748
       |||||||| |||||||| ||| ||||||||||||| |||||||   |||
seq2  -AAAAAGAT-GTTCTACACCTCTCTGATAGTAGCATCCAGTTGT--ATGA  738

seq1  ATAAAAATCAAAGACAT-TGAGGAG-ATGAG  777
      || |||||| ||||||| ||||||| |||||
seq2  AT-AAAATC-AAGACATGTGAGGAGAATGAG  767

seq1: chr12_44433351_44434172
seq2: B6Ng01-155C22.g_65_886 (reverse)

seq1  TACATACATACATACATACATACATACATACAGGTAAATATAAAATTTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATACATACATACATACATACATACATACAGGTAAATATAAAATTTAA  50

seq1  AATCAATTTCATTCATTGCATATAAAATCTAAATTAGATACAGTATAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAATTTCATTCATTGCATATAAAATCTAAATTAGATACAGTATAGAA  100

seq1  AAGAGATCAATAATAATCATGTTTCTATTAGATTCAAATATAAACCAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGATCAATAATAATCATGTTTCTATTAGATTCAAATATAAACCAATA  150

seq1  TTTATGAATTCTATTTATATAATTTTTCCAATAATATAAAATTCCAAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGAATTCTATTTATATAATTTTTCCAATAATATAAAATTCCAAAAT  200

seq1  TAGTTGTAAGTTCTACTAAGTCACAACTAATATTGATGTGTGATTGTTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTGTAAGTTCTACTAAGTCACAACTAATATTGATGTGTGATTGTTGT  250

seq1  TCAGAAATAATTGATATTTGAACTTTTTACATAGCCATGTTCAATTTAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAATAATTGATATTTGAACTTTTTACATAGCCATGTTCAATTTAAG  300

seq1  CAATAAATAATATTATGTTCATAACAAATCATTGACATTACAAATATCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAAATAATATTATGTTCATAACAAATCATTGACATTACAAATATCAT  350

seq1  TATAAATGTTGTTGTAGTTCTTATAGATTAAGCATAAATAAATAAAAAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAATGTTGTTGTAGTTCTTATAGATTAAGCATAAATAAATAAAAAGT  400

seq1  AGTTTATGAGATTTATATGAGGTAAATTTTAAAAGGGTTGGTGAGACATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTATGAGATTTATATGAGGTAAATTTTAAAAGGGTTGGTGAGACATA  450

seq1  ACATTCAAATAATTTAAGAGCAATATATTTCTGGCAATAAAGTCTTAGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTCAAATAATTTAAGAGCAATATATTTCTGGCAATAAAGTCTTAGAA  500

seq1  AATTGGGAAGTTTAGATTTTCCTATACAAATATTTTAAGTATATATCTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGGGAAGTTTAGATTTTCCTATACAAATATTTTAAGTATATATCTAT  550

seq1  ATTGATTATTTTTAAATGTTTCAAGATGATATGTTTTGAAAATTTATAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGATTATTTTTAAATGTTTCAAGATGATATGTTTTGAAAATTTATAAA  600

seq1  CATAGTTATTATTAACATAAAAATAATATAACTGAAGAAGTTAAATGGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGTTATTATTAACATAAAAATAATATAACTGAAGAAGTTAAATGGTG  650

seq1  AAGGGAAAAAGTGGAGAAGGAACAAAAAAAGCAGTGGGGGATAAATGAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAAAAAGTGGAGAAGGAACAAAAAAAGCAGTGGGGGATAAATGAGT  700

seq1  CAATTTCTAGAGATTTTATCAATAAGTTAATAGTGTGAATTGCAGTGAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTCTAGAGATTTTATCAATAAGTTAATAGTGTGAATTGCAGTGAGA  750

seq1  AATCAAACACAGAAGAATACGGTTTCGTTTTGACAGTGTGTTCAGGAAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAAACACAGAAGAATACGGTTTCGTTTTGACAGTGTGTTCAGGAAAA  800

seq1  ACTTAGTAGAAATAGTGAATTC  822
      ||||||||||||||||||||||
seq2  ACTTAGTAGAAATAGTGAATTC  822