BAC Information

Click to search

BAC

Clone NameB6Ng01-155J11
Chromosome12 (Build37)
Map Location 94,868,265 - 94,869,299
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream gene2610022K04Rik-ps, EG633639
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-155J11.bB6Ng01-155J11.g
ACCDH950331DH950332
length1,2141,028
definitionDH950331|Mus musculus domesticus DNA, BAC clone: B6Ng01-155J11, 5' end.DH950332|Mus musculus domesticus DNA, BAC clone: B6Ng01-155J11, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccacagtaaaatcatctggttcacggcttttttgactgggagact
tttaaatgaaagtttctatttccttaagggttatagtgttactcaaatag
tttacctggtttttgattagctttggtaagtgctatctgtttagaaaatc
atccattcaatttagattttccacttttgtggtgtataggcttttcaaaa
taagatataaaaagtcattgaatttcttcagtgtctgtgtttatgtctcc
cttttcatttctgattttgctgatttggataatttctgactgcattttag
ttagtttggctcagggtttgtcttttgggttgattttctcaaaggaccag
gtcttagttttgttgattcttttgcttttctcttgtttttaaatgattga
tcttcgacctgaattagattatttctgatccatttactcctgttgggtgg
atttgcttcttctttctgctagagccttcagatgtacttttaattcatta
gtatgagtatgctaccatttctttatgagagcacttagtgttatgaactc
ttagcattgctttcatagaattctgttgtggtaaatctcccaaatatgcc
ccagaatgaaaacatgtgcctagattgagcagacctaccactaaactacc
atcttccacatccttagaaacttgtggattcacaaagtcatgtgctcctg
ctctgctttgcttcatcttcctcctcatctgcatcctcttcctcttccat
tttctccttcttctctctctcaccttcttcttctcagctccagctgatct
gcccaatcatcagctctcctttactttacaaattaaggtgggaagcaggt
ttacaggaaatcacctgagtgctgacccattccttgttcatataaatttg
ggtatgttctatcctcattttcatttaattctagaaagacttttatttat
ttcttctttttccctgacaagtgatcatttgggagcagtcttcagtttca
tgatatgtaggttactgttgtgctgtagtcagtttatcatggtgtctgat
aaatgcatgagttattggagtcttgttattcatgaggttgcttggacaat
atatgtttatttggcaagtcttaatgtgctagaaagtattctttggctgg
ggaatgtcaggatcgtagcactgaccactggtttatgtcaattggctcaa
aaccgtcctatctg
gaattccaagtaaatgtggttataaataattgtatttaccactataaact
aataacagacaaaatgatgtgtgtatattcttttccttaattgaaattca
taatttgttaataactttaatttttatacatttagaaaattttatgaata
agcatattactcatgaaatgatattaaatgcatttaccctttaaattctc
tgattgtatgtgctaaagataaccttaatatcagttcaactatctttcct
tttgggtaatgttaattacatttgaaacttctggagcatttggtacattt
tattcctaatattctttgacatgcatgtttctaaggcctggacacataaa
cagtttctggattcaccattttatctacctatagatactcaaatgatcta
tgaccaggaagtttatgatattgaagttgaccttattattttccttatgt
tagcagtttatgaagtgaaatctatggagtgatctaaatagaggaagact
tattactctgcacatattttaaacttctcaaagacctacaaatatgtggc
tataatctatttagggtatatgattatgactgctcactttcccttgcagg
cctctcatggtacttttagacctcaaggcagagggctgtttctgagcact
tgcacataatgaggacttcaactgcttgcaaattttaataaatatttgca
agtttatttatctcctactgtgttgaaagtcaaagagtgcaggactttct
ccaccattgacaaaaatttacaacttctttatgctcagaccttccttgct
tactggtgagccaatatatttaggcaaaaatgatatggttgaagtccact
gacaaatgggtaagacagcaattctttatctttgagatctcaagaatgaa
ataagattctatcaaatcatgataaattctgacatgcaaatgatatacat
gaagcatatgtatttgtaaacacaaacaaataggatattattttctagta
attgattaccttgtgcttctatcctgct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_94868265_94869299
seq2: B6Ng01-155J11.g_68_1095

seq1  GAATTCCAAGTAAATGTGGTTATAAATAATTGTATTTACCACTATAAACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAGTAAATGTGGTTATAAATAATTGTATTTACCACTATAAACT  50

seq1  AATAACAGACAAAATGATGTGTGTATATTCTTTTCCTTAATTGAAATTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACAGACAAAATGATGTGTGTATATTCTTTTCCTTAATTGAAATTCA  100

seq1  TAATTTGTTAATAACTTTAATTTTTATACATTTAGAAAATTTTATGAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTGTTAATAACTTTAATTTTTATACATTTAGAAAATTTTATGAATA  150

seq1  AGCATATTACTCATGAAATGATATTAAATGCATTTACCCTTTAAATTCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATATTACTCATGAAATGATATTAAATGCATTTACCCTTTAAATTCTC  200

seq1  TGATTGTATGTGCTAAAGATAACCTTAATATCAGTTCAACTATCTTTCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTGTATGTGCTAAAGATAACCTTAATATCAGTTCAACTATCTTTCCT  250

seq1  TTTGGGTAATGTTAATTACATTTGAAACTTCTGGAGCATTTGGTACATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGTAATGTTAATTACATTTGAAACTTCTGGAGCATTTGGTACATTT  300

seq1  TATTCCTAATATTCTTTGACATGCATGTTTCTAAGGCCTGGACACATAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCCTAATATTCTTTGACATGCATGTTTCTAAGGCCTGGACACATAAA  350

seq1  CAGTTTCTGGATTCACCATTTTATCTACCTATAGATACTCAAATGATCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTCTGGATTCACCATTTTATCTACCTATAGATACTCAAATGATCTA  400

seq1  TGACCAGGAAGTTTATGATATTGAAGTTGACCTTATTATTTTCCTTATGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCAGGAAGTTTATGATATTGAAGTTGACCTTATTATTTTCCTTATGT  450

seq1  TAGCAGTTTATGAAGTGAAATCTATGGAGTGATCTAAATAGAGGAAGACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAGTTTATGAAGTGAAATCTATGGAGTGATCTAAATAGAGGAAGACT  500

seq1  TATTACTCTGCACATATTTTAAACTTCTCAAAGACCTACAAATATGTGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTACTCTGCACATATTTTAAACTTCTCAAAGACCTACAAATATGTGGC  550

seq1  TATAATCTATTTAGGGTATATGATTATGACTGCTCACTTTCCCTTGCAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATCTATTTAGGGTATATGATTATGACTGCTCACTTTCCCTTGCAGG  600

seq1  CCTCTCATGGTACTTTTAGACCTCAAGGCAGAGGGCTGTTTCTGAGCACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCATGGTACTTTTAGACCTCAAGGCAGAGGGCTGTTTCTGAGCACT  650

seq1  TGCACATAATGAGGACTTCAACTGCTTGCAAATTTTAATAAATATTTGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACATAATGAGGACTTCAACTGCTTGCAAATTTTAATAAATATTTGCA  700

seq1  AGTTTATTTATCTCCTACTGTGTTGAAAGTCAAAGAGTGCAGGACTTTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTATTTATCTCCTACTGTGTTGAAAGTCAAAGAGTGCAGGACTTTCT  750

seq1  CCACCATTGACAAAAATTTACAACTTCTTTATGCTCAGACCTTCCTTGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCATTGACAAAAATTTACAACTTCTTTATGCTCAGACCTTCCTTGCT  800

seq1  TACTGGTGAGCCAATATATTTAGGCAAAAATGATATGGTTGAAGTCCACT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGGTGAGCCAATATATTTAGGCAAAAATGATATGGTTGAAGTCCACT  850

seq1  GACAAATGGGTAAGACAGCAATTCTTTATCTTTGAGATCTCAAGAATGAA  900
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GACAAATGGGTAAGACAGCAATTCTTTATCTTTGAGATCTCAAGAATG-A  899

seq1  AATAAGATTCTATCAAATCATGATAAATTCTGACATGCAAATGATATACA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGATTCTATCAAATCATGATAAATTCTGACATGCAAATGATATACA  949

seq1  TGAAGCAATATGTATTTGTAAACACAAACAAATAAGAATAATTATTTTCT  1000
      |||||| ||||||||||||||||||||||||||| ||   ||||||||||
seq2  TGAAGC-ATATGTATTTGTAAACACAAACAAATAGGA--TATTATTTTCT  996

seq1  AGGTAAATTGATTACCTTGTGCTTCTAATCCTGCT  1035
      ||   ||||||||||||||||||||| ||||||||
seq2  AG--TAATTGATTACCTTGTGCTTCT-ATCCTGCT  1028