BAC Information

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BAC

Clone NameB6Ng01-155M11
Chromosome12 (Build37)
Map Location 120,094,145 - 120,095,047
singlet/doubletsinglet
Overlap genenone
Upstream geneCdca7l, Dnahc11, Sp4, LOC100042993, LOC668611, EG668615, LOC620665, Sp8
Downstream geneAbcb5, Itgb8, EG627557, LOC100043011, 4732474O15Rik, LOC668632
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-155M11.bB6Ng01-155M11.g
ACCDH950468DH950469
length1,209902
definitionDH950468|Mus musculus domesticus DNA, BAC clone: B6Ng01-155M11, 5' end.DH950469|Mus musculus domesticus DNA, BAC clone: B6Ng01-155M11, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggccaatacctaaacatgataaaagcaatctacagcaaacca
gtagccaacatcaaagtaaatggagagaagctggaagcaatcccactaaa
atcagggactagacaaggctgcccactttctccctaccttttcaacatag
tacttgaagtattagccagagcaattcgacaacaaaaggagatcaagggg
atacaaattggaaaagaggaagtcaaaatatcactttttgcagatgatat
gatagtatatataagtgaccctaaaaattccaacagagaactcctaaacc
tgataaacagcttcggtgaagtagctggatataaaattaactcaaacaag
tcaatggcctttctctacacaaagaataaacaggctgagaaagaaattag
ggaaacaacacccttctcaatagccacaaataatataaaatatctcggcg
tgactctaacgaaggaagtgaaagatctgtatgataaaaacttcaagtcc
ctgaagaaagaaattaaagaagatctcagaagatggaaagatctcccatg
ctcatggattggcaggaccaacattgtaaaaatggctatcttgccaaaag
caatctacagattcaatgcaatccccattaaaattccaactcaattcttc
aacgaattagaaggagcaatttgcaaattcatctggaataacaaaaaacc
gaggatagcaaaaactcttctcaaggataaaagaacctctggtggaatca
ccatgcctgacctaaagctttactacagagcaattgtgataaaaactgca
tggtactggtatagagacagacaagtggaccaatggaatagaattgaaga
cccagaaatgaacccacatacctatggtcacttgatcttcgacaagggag
ccaaaaccatccagtggaagaaagacagcattttcaacaattggtgctgg
cacactggttgttatcatgtagaagatgcgaatcgatcatactatctctg
tactagtcaatctagtgatcagacttcacataaacagagaaactgaacta
tagagagaaagtgggaaagctgaagaatgggcacaggtaatattctgaac
gaaagcatgcttggtctgtagatcggattggcaatgacctatggactcaa
ggttcgcagcagacctgctagacaagactcacgacttggaagattttaca
tctaattca
gaattcccactccaacaacccatgaaatgttactgcataattattcacct
tctgaggcccattagaacttatcagcagagaaagaaatttaatttaaact
cacccctctgtgccacagaatagcagggacatgagatcaaagcacaaagc
tctgtccttcagtggtttgcaacacctaggcacaatagggtgagagaacg
atgcattccagagcttcctggctttccggaccggaggggggtgggagtgg
gcttgcgtcaccagctggtttcaaggaagagactggtgctctgaaggggg
agttgtcaattatgttctaaagctgcgggtggccacattacttgtacccg
ccgctgcaaatcactttgctttacttgtgatgggcactctacacaccaaa
taaagtgtattttatttctttccttcccccgctataggtagggagtcgat
ggaaataagaatttttaactacagaagtaactatgagagccctgttttgc
acaagtgtgcatcccatagtgcttctctgttattgcttaagaagagtttc
cacaaagcctcagtctgagggtgcctcataccaatacagaatggtccaca
ggcgccatttaataatcttcaagtttgacccttggccaatctcaagggta
aaaagtagatccaagttaacacaaacacccacaggtctgtgtctacaaaa
gtccatgatgggaaaagttttgccaaatgcgggctcttttcctcagacag
tctgcatgctacaggcacattctccaaatgaggtactcttcccaaatggt
tgatctttctcctgggtctctaaaaatcaccaagatttggtctggagaag
attgctagggtgccctgttatcaaatgggccaagaataaagttggagagc
tg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_120094145_120095047
seq2: B6Ng01-155M11.g_67_968 (reverse)

seq1  CTGCTCTCC-ACTCTATTCTTTGGCCCATTTGATACCAGGGCACCCTAGC  49
      | ||||||| ||| ||||| ||||||||||||||| ||||||||||||||
seq2  CAGCTCTCCAACTTTATTC-TTGGCCCATTTGATAACAGGGCACCCTAGC  49

seq1  AATCTTCTCCAGACCAAATCTTGGTGATATTTTAAGAGACCCAGGAGAAA  99
      ||||||||||||||||||||||||||  ||||| ||||||||||||||||
seq2  AATCTTCTCCAGACCAAATCTTGGTG--ATTTTTAGAGACCCAGGAGAAA  97

seq1  GATCAACCATTTGGGAAGAGTACCTCATTTGGAGAATGTGCCTGTAGCAT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAACCATTTGGGAAGAGTACCTCATTTGGAGAATGTGCCTGTAGCAT  147

seq1  GCAGACTGTCTGAGGAAAAGAGCCCGCATTTGGCAAAACTTTTCCCATCA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGACTGTCTGAGGAAAAGAGCCCGCATTTGGCAAAACTTTTCCCATCA  197

seq1  TGGACTTTTGTAGACACAGACCTGTGGGTGTTTGTGTTAACTTGGATCTA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACTTTTGTAGACACAGACCTGTGGGTGTTTGTGTTAACTTGGATCTA  247

seq1  CTTTTTACCCTTGAGATTGGCCAAGGGTCAAACTTGAAGATTATT-AATG  298
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CTTTTTACCCTTGAGATTGGCCAAGGGTCAAACTTGAAGATTATTAAATG  297

seq1  GCGCCTGTGGACCATTCTGTATTGGTATGAGGCACCCTCAGACTGAGGCT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCCTGTGGACCATTCTGTATTGGTATGAGGCACCCTCAGACTGAGGCT  347

seq1  TTGTGGAAACTCTTCTTAAGCAATAACAGAGAAGCACTATGGGATGCACA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGGAAACTCTTCTTAAGCAATAACAGAGAAGCACTATGGGATGCACA  397

seq1  CTTGTGCAAAACAGGGCTCTCATAGTTACTTCTGTAGTTAAAAATTCTTA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTGCAAAACAGGGCTCTCATAGTTACTTCTGTAGTTAAAAATTCTTA  447

seq1  TTTCCATCGACTCCCTACCTATAGCGGGGGAAGGAAAGAAATAAAATACA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCATCGACTCCCTACCTATAGCGGGGGAAGGAAAGAAATAAAATACA  497

seq1  CTTTATTTGGTGTGTAGAGTGCCCATCACAAGTAAAGCAAAGTGATTTGC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATTTGGTGTGTAGAGTGCCCATCACAAGTAAAGCAAAGTGATTTGC  547

seq1  AGCGGCGGGTACAAGTAATGTGGCCACCCGCAGCTTTAGAACATAATTGA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGGCGGGTACAAGTAATGTGGCCACCCGCAGCTTTAGAACATAATTGA  597

seq1  CAACTCCCCCTTCAGAGCACCAGTCTCTTCCTTGAAACCAGCTGGTGACG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTCCCCCTTCAGAGCACCAGTCTCTTCCTTGAAACCAGCTGGTGACG  647

seq1  CAAGCCCACTCCCACCCCCCTCCGGTCCGGAAAGCCAGGAAGCTCTGGAA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCCCACTCCCACCCCCCTCCGGTCCGGAAAGCCAGGAAGCTCTGGAA  697

seq1  TGCATCGTTCTCTCACCCTATTGTGCCTAGGTGTTGCAAACCACTGAAGG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATCGTTCTCTCACCCTATTGTGCCTAGGTGTTGCAAACCACTGAAGG  747

seq1  ACAGAGCTTTGTGCTTTGATCTCATGTCCCTGCTATTCTGTGGCACAGAG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGCTTTGTGCTTTGATCTCATGTCCCTGCTATTCTGTGGCACAGAG  797

seq1  GGGTGAGTTTAAATTAAATTTCTTTCTCTGCTGATAAGTTCTAATGGGCC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGAGTTTAAATTAAATTTCTTTCTCTGCTGATAAGTTCTAATGGGCC  847

seq1  TCAGAAGGTGAATAATTATGCAGTAACATTTCATGGGTTGTTGGAGTGGG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAGGTGAATAATTATGCAGTAACATTTCATGGGTTGTTGGAGTGGG  897

seq1  AATTC  903
      |||||
seq2  AATTC  902